BLASTX nr result

ID: Panax25_contig00023019 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00023019
         (444 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017252246.1 PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDE...    83   9e-16
XP_017257619.1 PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDE...    60   1e-07

>XP_017252246.1 PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT
           1-like [Daucus carota subsp. sativus] KZM96214.1
           hypothetical protein DCAR_019456 [Daucus carota subsp.
           sativus]
          Length = 903

 Score = 83.2 bits (204), Expect = 9e-16
 Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 18/152 (11%)
 Frame = +3

Query: 33  MESVKIVEENSTPKSSPSPN----------IEVPKCHDSNGTVEPTSQGPVMDESNLV-- 176
           MESV+ VE+N   K+ P+P           IEVPK +D +  +EP     +M  S LV  
Sbjct: 1   MESVETVEDNFPLKTFPNPELASGSKDQSYIEVPKRNDPSEELEPELHVSMMGGSKLVNV 60

Query: 177 QDPSI------GQVLPTRNKFLEVAQDHQGSLAAYPKIRVMQDTSDGPLLEQETXXXXXX 338
           QDPS       GQ LP  N  +E +Q+H+  + AYP+++V  D +D    EQE       
Sbjct: 61  QDPSNSMTPQQGQSLPVENTVIETSQNHENFVDAYPQLKVRNDITDVLSSEQEV------ 114

Query: 339 XXXXTDPQGSVTPYPGIKIMQDSSDGPSTEQE 434
               ++ QGSV  YP +K++QD SD P  EQ+
Sbjct: 115 --AESELQGSVAVYPQLKVLQDISDEPLLEQD 144


>XP_017257619.1 PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT
           1-like [Daucus carota subsp. sativus] XP_017257620.1
           PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE
           LIGHT 1-like [Daucus carota subsp. sativus]
           XP_017257621.1 PREDICTED: protein WEAK CHLOROPLAST
           MOVEMENT UNDER BLUE LIGHT 1-like [Daucus carota subsp.
           sativus] KZM91705.1 hypothetical protein DCAR_020930
           [Daucus carota subsp. sativus]
          Length = 950

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 15/142 (10%)
 Frame = +3

Query: 33  MESVKIVEENSTPKSS------PSPNIEVPKCHDSNGTVEPTSQGPVMDESNLV--QDPS 188
           MES + VE++S P+SS        P  EVPK  D+   V    +  V   SNLV  QDPS
Sbjct: 1   MESAESVEDSSLPESSLASVNKDQPCTEVPKIGDTGVKVVLELRVSVTGGSNLVNVQDPS 60

Query: 189 I------GQVLPTRNKFLEVAQDHQGSL-AAYPKIRVMQDTSDGPLLEQETXXXXXXXXX 347
                  GQ L   N  +E  Q+H+G + AAYP++RV +D+ D    EQ+          
Sbjct: 61  SSMTPQQGQGLLGENAGVERTQNHEGFVTAAYPRLRVRKDSIDRLPEEQKVSG------- 113

Query: 348 XTDPQGSVTPYPGIKIMQDSSD 413
            T+P G V  YP IK+ +  S+
Sbjct: 114 -TEPPGYVAIYPQIKVSEGISE 134


Top