BLASTX nr result

ID: Panax25_contig00022939 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00022939
         (540 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_064004.1 orf107b gene product (mitochondrion) [Beta vulgaris ...   133   3e-40
XP_002446122.1 hypothetical protein SORBIDRAFT_06g002025, partia...    79   8e-16
OIT04243.1 hypothetical protein A4A49_22702 [Nicotiana attenuata]      67   2e-11
EPS74694.1 hypothetical protein M569_00069 [Genlisea aurea]            67   1e-10
CBI23503.3 unnamed protein product, partial [Vitis vinifera]           50   6e-10
XP_002439577.1 hypothetical protein SORBIDRAFT_09g014016, partia...    63   8e-10
XP_002868452.1 predicted protein [Arabidopsis lyrata subsp. lyra...    57   9e-08
XP_016652391.1 PREDICTED: NADH-ubiquinone oxidoreductase chain 2...    59   6e-07
XP_003593389.1 transmembrane protein, putative [Medicago truncat...    40   5e-06
KJB09779.1 hypothetical protein B456_001G164700, partial [Gossyp...    55   8e-06

>NP_064004.1 orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] YP_004222369.1 hypothetical protein
           BevumaM_p136 (mitochondrion) [Beta vulgaris subsp.
           maritima] YP_004842174.1 hypothetical protein BemaM_p130
           (mitochondrion) [Beta macrocarpa] BAA99316.1 orf107b
           (mitochondrion) [Beta vulgaris subsp. vulgaris]
           CBJ14008.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBJ17584.1 hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
           CBJ20702.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBX24979.1 hypothetical
           protein (mitochondrion) [Beta macrocarpa] CBL54138.1
           hypothetical protein (mitochondrion) [Beta vulgaris
           subsp. maritima]
          Length = 107

 Score =  133 bits (334), Expect(2) = 3e-40
 Identities = 64/69 (92%), Positives = 65/69 (94%)
 Frame = -2

Query: 539 RPIDHGTNRVGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSQAFSSTSPLQSSIKL 360
           RPIDHGTNRVGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPS+AFSST PLQSSIKL
Sbjct: 6   RPIDHGTNRVGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTFPLQSSIKL 65

Query: 359 AFPRRY*MG 333
           AF RR  MG
Sbjct: 66  AFSRRSEMG 74



 Score = 59.7 bits (143), Expect(2) = 3e-40
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -3

Query: 334 GVFPSPIVCIGLASSRTKEAFLRARACRKADDYIS 230
           GVFPSPIVCIGLASSR+K  +LRARACRKAD YIS
Sbjct: 74  GVFPSPIVCIGLASSRSK-LYLRARACRKADHYIS 107


>XP_002446122.1 hypothetical protein SORBIDRAFT_06g002025, partial [Sorghum
           bicolor]
          Length = 132

 Score = 79.3 bits (194), Expect = 8e-16
 Identities = 35/40 (87%), Positives = 35/40 (87%)
 Frame = -2

Query: 539 RPIDHGTNRVGRPNHHTTRIDANPPRYRTCDSHRIRLAQR 420
           RPIDHGTNRV RPNHHTT IDANPP YRTCDSHRIRL  R
Sbjct: 9   RPIDHGTNRVSRPNHHTTCIDANPPPYRTCDSHRIRLTVR 48


>OIT04243.1 hypothetical protein A4A49_22702 [Nicotiana attenuata]
          Length = 81

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 32/44 (72%), Positives = 35/44 (79%)
 Frame = +2

Query: 209 ACSRSLLAYVVVGLPTRTRPQECLLGSGRSQADTYDRRRKDPPF 340
           +CS SLLAYVVV LP   RP ECLLGSGR QADTY+R R+DP F
Sbjct: 17  SCSNSLLAYVVVELPALIRPPECLLGSGRRQADTYNRGREDPYF 60


>EPS74694.1 hypothetical protein M569_00069 [Genlisea aurea]
          Length = 190

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +3

Query: 261 RARKNASLVRDEAKPIHTIGEGKTPHLIAPGERKFD 368
           R R+NASLVRDEAKP +TIGEGKTPH IAPGERKFD
Sbjct: 80  RRRQNASLVRDEAKPKYTIGEGKTPHFIAPGERKFD 115


>CBI23503.3 unnamed protein product, partial [Vitis vinifera]
          Length = 526

 Score = 49.7 bits (117), Expect(2) = 6e-10
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = +2

Query: 293 RSQADTYDRRRKDPPFNSAWGTQV 364
           RSQADTYDRRRKDPPF+S WGT V
Sbjct: 8   RSQADTYDRRRKDPPFHSTWGTGV 31



 Score = 41.2 bits (95), Expect(2) = 6e-10
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = +3

Query: 480 YTCSVVVGPTHPICSMIYGS 539
           YT SV VGPTHPICSMIYGS
Sbjct: 34  YTYSVRVGPTHPICSMIYGS 53


>XP_002439577.1 hypothetical protein SORBIDRAFT_09g014016, partial [Sorghum
           bicolor]
          Length = 100

 Score = 62.8 bits (151), Expect = 8e-10
 Identities = 29/44 (65%), Positives = 29/44 (65%)
 Frame = +3

Query: 408 WI*ESLCEPYXXXXXXXXXXXXXXYTCSVVVGPTHPICSMIYGS 539
           WI ESLCEPY              YTCSVVVGPTHPICSMIYGS
Sbjct: 6   WIFESLCEPYAVRVARTVRRGVRVYTCSVVVGPTHPICSMIYGS 49


>XP_002868452.1 predicted protein [Arabidopsis lyrata subsp. lyrata] EFH44711.1
           predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 96

 Score = 57.4 bits (137), Expect = 9e-08
 Identities = 32/52 (61%), Positives = 36/52 (69%), Gaps = 5/52 (9%)
 Frame = +2

Query: 224 LLAYVVVGLPTRTRPQECLLGSGRSQA----DTYDRRRKDPP-FNSAWGTQV 364
           LLAYV+VGLPTRTRP ECLL     +A      YDRRRKDP  FNSAW + +
Sbjct: 14  LLAYVMVGLPTRTRPPECLLFVVLDEAKPIHTIYDRRRKDPHLFNSAWASLI 65


>XP_016652391.1 PREDICTED: NADH-ubiquinone oxidoreductase chain 2 [Prunus mume]
          Length = 388

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 27/41 (65%), Positives = 27/41 (65%)
 Frame = +3

Query: 417 ESLCEPYXXXXXXXXXXXXXXYTCSVVVGPTHPICSMIYGS 539
           ESLCEPY              YTCSVVVGPTHPICSMIYGS
Sbjct: 87  ESLCEPYAVRVARTVTRGVRVYTCSVVVGPTHPICSMIYGS 127


>XP_003593389.1 transmembrane protein, putative [Medicago truncatula] AES63640.1
           transmembrane protein, putative [Medicago truncatula]
          Length = 60

 Score = 40.4 bits (93), Expect(2) = 5e-06
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +3

Query: 480 YTCSVVVGPTHPICSMIYGS 539
           YT SVV+GPTHPICSMIY S
Sbjct: 25  YTFSVVLGPTHPICSMIYAS 44



 Score = 37.4 bits (85), Expect(2) = 5e-06
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +2

Query: 407 MDLGVFVRAVCGESRTYGNEG 469
           MDLGVFVR +CGESR  GN+G
Sbjct: 1   MDLGVFVREMCGESRRCGNKG 21


>KJB09779.1 hypothetical protein B456_001G164700, partial [Gossypium raimondii]
          Length = 231

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -1

Query: 333 GSFLRLSYVSAWLRPEPRRHSCGRVR 256
           GSFLRLSYVSAWLRPEPRRHS GRVR
Sbjct: 156 GSFLRLSYVSAWLRPEPRRHSGGRVR 181


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