BLASTX nr result

ID: Panax25_contig00022735 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00022735
         (455 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017238077.1 PREDICTED: classical arabinogalactan protein 26-l...    66   5e-11
XP_017229750.1 PREDICTED: classical arabinogalactan protein 26 [...    59   2e-08
KZN10134.1 hypothetical protein DCAR_002790 [Daucus carota subsp...    57   1e-07
XP_011082503.1 PREDICTED: classical arabinogalactan protein 26-l...    55   1e-06

>XP_017238077.1 PREDICTED: classical arabinogalactan protein 26-like [Daucus carota
           subsp. sativus] KZN03672.1 hypothetical protein
           DCAR_012428 [Daucus carota subsp. sativus]
          Length = 142

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 46/116 (39%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
 Frame = +1

Query: 25  MATKWSIXXXXXXXXXXXXXXXXQVPISVISAAPAVXXXXXXXXXXXXXXXXXXX---DI 195
           MA KWSI                Q+P+SVISAAP+V                      DI
Sbjct: 1   MAAKWSIFLGMTMVLMASIASS-QIPVSVISAAPSVLPFEPPLSSPTATSPSSSALSPDI 59

Query: 196 TPLFPSPA-----ESTLXXXXXXXXXXXXDEVFSPGPIKAFSPSGLLPDSSAFSIN 348
           TPLFPSPA     +S+L            DEV +PGPI A  PSGL PDSSAF+++
Sbjct: 60  TPLFPSPAGPSPAQSSLPLIPSSPSPPNPDEVTAPGPITALPPSGLFPDSSAFTLH 115


>XP_017229750.1 PREDICTED: classical arabinogalactan protein 26 [Daucus carota
           subsp. sativus]
          Length = 130

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
 Frame = +1

Query: 94  QVPISVISAAPAVXXXXXXXXXXXXXXXXXXXDITPLFPS-----PAESTLXXXXXXXXX 258
           Q+PISVISAAPA+                   D+ P+FPS     P+EST          
Sbjct: 23  QLPISVISAAPALLPFEPPLSSPPALSPALSPDMLPVFPSETAPSPSESTFPVIPSSPSP 82

Query: 259 XXXDEVFSPGPIKAFSPSGLLPDSSAFSIN 348
              DE+F+PGP+  F+PSG LP+SSA S++
Sbjct: 83  PNPDEMFAPGPVLPFAPSG-LPESSALSLS 111


>KZN10134.1 hypothetical protein DCAR_002790 [Daucus carota subsp. sativus]
          Length = 102

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 41/102 (40%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
 Frame = -1

Query: 386 PRSSIIELKDPNALILNAEESGKSPDGEKALMGPGENTXXXXXXXXXXXXXXSVDSAG-- 213
           PR SI EL+ P  L LNAE+SGK PDG K   GPG N               +VDS G  
Sbjct: 2   PRISITELEKPAVLRLNAEDSGK-PDGAKGKTGPGANISSGFGGLGLDGMTGNVDSDGEG 60

Query: 212 ---EGNRGVISXXXXXXXXXXXXXXXXXXRTAGAAEITEMGT 96
              EGN G +S                  R+AGAAEIT++G+
Sbjct: 61  AVSEGNTGSMSGESAGLKAGGEERGGSNGRSAGAAEITDIGS 102


>XP_011082503.1 PREDICTED: classical arabinogalactan protein 26-like [Sesamum
           indicum]
          Length = 132

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 37/91 (40%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
 Frame = +1

Query: 97  VPISVISAAPAVXXXXXXXXXXXXXXXXXXXDITPLFPSPA-------ESTLXXXXXXXX 255
           +P S ISAAPA+                   DITPLFPSPA       ES++        
Sbjct: 26  LPASTISAAPALLPDPISPSSPPPALSP---DITPLFPSPAGSELSPTESSVPIIPSSPS 82

Query: 256 XXXXDEVFSPGPIKAFSPSGLLPDSSAFSIN 348
               D V +PGP  AF PSGLLPDSS+  +N
Sbjct: 83  PPNPDVVAAPGPDMAFPPSGLLPDSSSLRLN 113


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