BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00022598
         (483 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019079284.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    63   1e-08
CBI21871.3 unnamed protein product, partial [Vitis vinifera]           63   1e-08
XP_010656984.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    62   2e-08

>XP_019079284.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           isoform X2 [Vitis vinifera]
          Length = 381

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 48/138 (34%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
 Frame = +3

Query: 3   DYIEDAFLEK---------DSPA----DNKRAAVEDEEYARLLSRMXXXXXXXXXXXXXX 143
           DY+E++  E+         DSP     D+ + A EDEEYAR++ R               
Sbjct: 153 DYVEESSSERVIERGPPKPDSPRFSGEDSMKVAAEDEEYARMMLRFDELEKEELAAGSGD 212

Query: 144 X--SDELDEVDLKHQPSQLYEDHEVKSLEMDLLSDSLVESKDVHSTTK---LEDHLEQDF 308
               DE +E D+ H  SQL  DH + SLE   +   L  SKD ++TT+    + H E+DF
Sbjct: 213 EHDEDEHNEADVDHSLSQLSGDHVLGSLEERQVRKPLHHSKDEYATTEELLSKQHFEEDF 272

Query: 309 RNQLAREASKVQPASKVS 362
            NQL  E  K Q   K S
Sbjct: 273 ANQLKLEGLKEQSVPKDS 290


>CBI21871.3 unnamed protein product, partial [Vitis vinifera]
          Length = 393

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 48/138 (34%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
 Frame = +3

Query: 3   DYIEDAFLEK---------DSPA----DNKRAAVEDEEYARLLSRMXXXXXXXXXXXXXX 143
           DY+E++  E+         DSP     D+ + A EDEEYAR++ R               
Sbjct: 165 DYVEESSSERVIERGPPKPDSPRFSGEDSMKVAAEDEEYARMMLRFDELEKEELAAGSGD 224

Query: 144 X--SDELDEVDLKHQPSQLYEDHEVKSLEMDLLSDSLVESKDVHSTTK---LEDHLEQDF 308
               DE +E D+ H  SQL  DH + SLE   +   L  SKD ++TT+    + H E+DF
Sbjct: 225 EHDEDEHNEADVDHSLSQLSGDHVLGSLEERQVRKPLHHSKDEYATTEELLSKQHFEEDF 284

Query: 309 RNQLAREASKVQPASKVS 362
            NQL  E  K Q   K S
Sbjct: 285 ANQLKLEGLKEQSVPKDS 302


>XP_010656984.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           isoform X1 [Vitis vinifera]
          Length = 385

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
 Frame = +3

Query: 3   DYIEDAFLEK---------DSPA----DNKRAAVEDEEYARLLSRMXXXXXXXXXXXXXX 143
           DY+E++  E+         DSP     D+ + A EDEEYAR++ R               
Sbjct: 153 DYVEESSSERVIERGPPKPDSPRFSGEDSMKVAAEDEEYARMMLRFDELEKEELAAGSGD 212

Query: 144 X--SDELDEVDLKHQPSQLYEDHEVKSLEMDLLSDSLVESKDVHSTTK---LEDHLEQDF 308
               DE +E D+ H  SQL  DH + SLE   +   L  SKD ++TT+    + H E+DF
Sbjct: 213 EHDEDEHNEADVDHSLSQLSGDHVLGSLEERQVRKPLHHSKDEYATTEELLSKQHFEEDF 272

Query: 309 RNQLAREASKVQPASKVSASLPK 377
            NQL    SK+Q       S+PK
Sbjct: 273 ANQL---KSKIQLEGLKEQSVPK 292