BLASTX nr result
ID: Panax25_contig00021908
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00021908
(387 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZN06983.1 hypothetical protein DCAR_007820 [Daucus carota subsp... 116 1e-27
XP_017236643.1 PREDICTED: twinkle homolog protein, chloroplastic... 116 1e-27
XP_017225001.1 PREDICTED: twinkle homolog protein, chloroplastic... 87 2e-17
XP_011460420.1 PREDICTED: twinkle homolog protein, chloroplastic... 74 1e-12
ONI11295.1 hypothetical protein PRUPE_4G099700 [Prunus persica] 71 6e-12
ONI11292.1 hypothetical protein PRUPE_4G099700 [Prunus persica] ... 71 7e-12
XP_008225676.1 PREDICTED: twinkle homolog protein, chloroplastic... 70 2e-11
XP_016688798.1 PREDICTED: primase homolog protein isoform X2 [Go... 70 2e-11
XP_016688797.1 PREDICTED: primase homolog protein isoform X1 [Go... 70 2e-11
KHG10114.1 DNA primase/helicase [Gossypium arboreum] 68 8e-11
XP_017606249.1 PREDICTED: twinkle homolog protein, chloroplastic... 68 8e-11
XP_008445786.1 PREDICTED: twinkle homolog protein, chloroplastic... 67 1e-10
XP_002268852.1 PREDICTED: twinkle homolog protein, chloroplastic... 67 1e-10
XP_008445781.1 PREDICTED: twinkle homolog protein, chloroplastic... 67 1e-10
XP_018827714.1 PREDICTED: twinkle homolog protein, chloroplastic... 67 2e-10
XP_018827713.1 PREDICTED: twinkle homolog protein, chloroplastic... 67 2e-10
XP_015882501.1 PREDICTED: twinkle homolog protein, chloroplastic... 67 3e-10
XP_012444436.1 PREDICTED: primase homolog protein isoform X2 [Go... 66 3e-10
XP_012444435.1 PREDICTED: primase homolog protein isoform X1 [Go... 66 3e-10
XP_016749800.1 PREDICTED: twinkle homolog protein, chloroplastic... 65 7e-10
>KZN06983.1 hypothetical protein DCAR_007820 [Daucus carota subsp. sativus]
Length = 688
Score = 116 bits (290), Expect = 1e-27
Identities = 64/121 (52%), Positives = 82/121 (67%), Gaps = 7/121 (5%)
Frame = -2
Query: 344 MLVDYR------ILMASRHFFLKSTRLPPAAQLLTSRTYSRIICSAFPSKPISNLSPFSL 183
ML++YR ILMA+R+ F K T LP QLL+SRTYS+++ S PSKP S SPF +
Sbjct: 1 MLLNYRKFLSLNILMATRNMFFKGTYLP-RTQLLSSRTYSKLLFSNHPSKPTSKSSPFLI 59
Query: 182 KTSGFSFTPHATTSSP-ELENPKVETHNFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCP 6
K+ G S+TPHA SP E+EN +V+ N +L ILN+KL+ +GI G NPGQY GL CP
Sbjct: 60 KSCGVSYTPHARAYSPVEVENEEVDAENSMRLSILNKKLENVGIGSGDWNPGQYHGLICP 119
Query: 5 M 3
M
Sbjct: 120 M 120
>XP_017236643.1 PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
[Daucus carota subsp. sativus]
Length = 691
Score = 116 bits (290), Expect = 1e-27
Identities = 64/121 (52%), Positives = 82/121 (67%), Gaps = 7/121 (5%)
Frame = -2
Query: 344 MLVDYR------ILMASRHFFLKSTRLPPAAQLLTSRTYSRIICSAFPSKPISNLSPFSL 183
ML++YR ILMA+R+ F K T LP QLL+SRTYS+++ S PSKP S SPF +
Sbjct: 1 MLLNYRKFLSLNILMATRNMFFKGTYLP-RTQLLSSRTYSKLLFSNHPSKPTSKSSPFLI 59
Query: 182 KTSGFSFTPHATTSSP-ELENPKVETHNFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCP 6
K+ G S+TPHA SP E+EN +V+ N +L ILN+KL+ +GI G NPGQY GL CP
Sbjct: 60 KSCGVSYTPHARAYSPVEVENEEVDAENSMRLSILNKKLENVGIGSGDWNPGQYHGLICP 119
Query: 5 M 3
M
Sbjct: 120 M 120
>XP_017225001.1 PREDICTED: twinkle homolog protein,
chloroplastic/mitochondrial-like [Daucus carota subsp.
sativus]
Length = 676
Score = 87.0 bits (214), Expect = 2e-17
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = -2
Query: 251 TYSRIICSAFPSKPISNLSPFSLKTSGFSFTPHATT-SSPELENPKVETHNFRKLMILNE 75
T S I +AFP+KPIS + SLKT S TP+ T +S ++ P+VE + KL+ILNE
Sbjct: 29 TCSNFIFNAFPAKPISIFTNLSLKTCAISSTPNGTVVNSVKVVKPEVEVQSDNKLIILNE 88
Query: 74 KLKQLGIDCGHCNPGQYGGLSCP 6
KL +LGID GHCNPG+Y G+ CP
Sbjct: 89 KLMKLGIDSGHCNPGEYYGMLCP 111
>XP_011460420.1 PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
isoform X1 [Fragaria vesca subsp. vesca]
Length = 702
Score = 73.6 bits (179), Expect = 1e-12
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Frame = -2
Query: 326 ILMASRHFFLKSTRL----PPAAQLLTSRTYSRIICSAFPSKPISNLSPFSLKTSGFSFT 159
+LMAS+ LKST PP+ Q ++ R++ SAFP KP S PF L+T+G+S+
Sbjct: 21 LLMASKQL-LKSTPFTNPSPPSPQTHLFHSH-RLVFSAFPPKPTSKARPFCLRTNGYSYA 78
Query: 158 PHATTSSPELENPKVETHNFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCPM 3
AT +P+ + +E + ++ L +KLK++GID C P QYG L CPM
Sbjct: 79 SRATVKAPKPVD--LEITDEQRCESLTKKLKEIGIDDEICEPAQYGHLICPM 128
>ONI11295.1 hypothetical protein PRUPE_4G099700 [Prunus persica]
Length = 624
Score = 71.2 bits (173), Expect = 6e-12
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Frame = -2
Query: 326 ILMASRHFFLKSTRLP----PAAQLLTSRTYSRIICSAFPSKPISNLSPFSLKTSGFSFT 159
+LM + F KST P P++Q + ++ R++ S KP+S P L+T+G+S+
Sbjct: 21 LLMGTVQLF-KSTPCPNPLTPSSQRHSFHSH-RLVFSPLSPKPMSKTRPLCLRTNGYSYV 78
Query: 158 PHATTSSP-ELENPKVETHNFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCPM 3
HA ++P ELEN + + +F +L L KL+ LGID G C PGQY L CP+
Sbjct: 79 SHANGAAPAELENAEEKRVDFNQLSRLKLKLEMLGIDYGICMPGQYNHLICPI 131
>ONI11292.1 hypothetical protein PRUPE_4G099700 [Prunus persica] ONI11293.1
hypothetical protein PRUPE_4G099700 [Prunus persica]
Length = 699
Score = 71.2 bits (173), Expect = 7e-12
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Frame = -2
Query: 326 ILMASRHFFLKSTRLP----PAAQLLTSRTYSRIICSAFPSKPISNLSPFSLKTSGFSFT 159
+LM + F KST P P++Q + ++ R++ S KP+S P L+T+G+S+
Sbjct: 21 LLMGTVQLF-KSTPCPNPLTPSSQRHSFHSH-RLVFSPLSPKPMSKTRPLCLRTNGYSYV 78
Query: 158 PHATTSSP-ELENPKVETHNFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCPM 3
HA ++P ELEN + + +F +L L KL+ LGID G C PGQY L CP+
Sbjct: 79 SHANGAAPAELENAEEKRVDFNQLSRLKLKLEMLGIDYGICMPGQYNHLICPI 131
>XP_008225676.1 PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
[Prunus mume]
Length = 698
Score = 70.1 bits (170), Expect = 2e-11
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Frame = -2
Query: 326 ILMASRHFFLKSTRLPPAAQLLTSRTYS----RIICSAFPSKPISNLSPFSLKTSGFSFT 159
+LM + F KST P L S+ +S R++ S KP+S P L+T+G+S+
Sbjct: 21 LLMGTVQLF-KSTPCPNP--LTPSQRHSFHSHRLVFSPLSPKPMSKTRPLCLRTNGYSYV 77
Query: 158 PHATTSSP-ELENPKVETHNFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCPM 3
HA ++P ELEN + + +F +L L KL+ LGID G C PGQY L CP+
Sbjct: 78 SHANGAAPAELENAEEKRVDFNQLSRLKLKLEMLGIDYGICMPGQYNHLICPI 130
>XP_016688798.1 PREDICTED: primase homolog protein isoform X2 [Gossypium hirsutum]
Length = 448
Score = 69.7 bits (169), Expect = 2e-11
Identities = 47/109 (43%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Frame = -2
Query: 326 ILMASRHFFLKSTRLPPAAQLLTSRTYSRIICSAFPSKPISNLSPFSLKTSGFSFTPHAT 147
I M S+HF L S LP T S+ + +FPSKPI SL+T+GF P +
Sbjct: 27 IFMTSKHF-LPSPLLPQTLSPKHFSTPSKRLLPSFPSKPIPKNQSLSLRTNGFYSLPSPS 85
Query: 146 TSSPELENPKVETH--NFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCP 6
SSP +P VE + R L ILN KLKQLGID C G+ L CP
Sbjct: 86 VSSP---SPDVEDQPSDTRSLQILNYKLKQLGIDITECVAGRENRLMCP 131
>XP_016688797.1 PREDICTED: primase homolog protein isoform X1 [Gossypium hirsutum]
Length = 469
Score = 69.7 bits (169), Expect = 2e-11
Identities = 47/109 (43%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Frame = -2
Query: 326 ILMASRHFFLKSTRLPPAAQLLTSRTYSRIICSAFPSKPISNLSPFSLKTSGFSFTPHAT 147
I M S+HF L S LP T S+ + +FPSKPI SL+T+GF P +
Sbjct: 27 IFMTSKHF-LPSPLLPQTLSPKHFSTPSKRLLPSFPSKPIPKNQSLSLRTNGFYSLPSPS 85
Query: 146 TSSPELENPKVETH--NFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCP 6
SSP +P VE + R L ILN KLKQLGID C G+ L CP
Sbjct: 86 VSSP---SPDVEDQPSDTRSLQILNYKLKQLGIDITECVAGRENRLMCP 131
>KHG10114.1 DNA primase/helicase [Gossypium arboreum]
Length = 639
Score = 68.2 bits (165), Expect = 8e-11
Identities = 47/113 (41%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Frame = -2
Query: 326 ILMASRHFFLKSTRLPPAAQLLTSRTYSRIICSAFPSKPISNLSPFSLKTSGFSFTPHAT 147
I MAS+HF L S LP T S+ + + SKPI FSL+T+GF P +
Sbjct: 27 IFMASKHF-LPSPLLPQTLSPKHFSTPSKRLLPSLSSKPIPKNHSFSLRTNGFCSLPSPS 85
Query: 146 TSSP------ELENPKVETHNFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCP 6
SSP +LE+ +T R L ILN KLKQLGID C G+ L CP
Sbjct: 86 VSSPSPAYSQDLEDQPSDT---RSLQILNHKLKQLGIDITECVAGRENRLKCP 135
>XP_017606249.1 PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
[Gossypium arboreum]
Length = 704
Score = 68.2 bits (165), Expect = 8e-11
Identities = 47/113 (41%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Frame = -2
Query: 326 ILMASRHFFLKSTRLPPAAQLLTSRTYSRIICSAFPSKPISNLSPFSLKTSGFSFTPHAT 147
I MAS+HF L S LP T S+ + + SKPI FSL+T+GF P +
Sbjct: 27 IFMASKHF-LPSPLLPQTLSPKHFSTPSKRLLPSLSSKPIPKNHSFSLRTNGFCSLPSPS 85
Query: 146 TSSP------ELENPKVETHNFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCP 6
SSP +LE+ +T R L ILN KLKQLGID C G+ L CP
Sbjct: 86 VSSPSPAYSQDLEDQPSDT---RSLQILNHKLKQLGIDITECVAGRENRLKCP 135
>XP_008445786.1 PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
isoform X2 [Cucumis melo]
Length = 610
Score = 67.4 bits (163), Expect = 1e-10
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = -2
Query: 239 IICSAFPSKPISNLSPFSLKTSGFS-FTPHATTSSPEL--ENPKVETHNFRKLMILNEKL 69
++ +FP +P S + PF++K +GFS FT HA P ENP+ + + L IL +KL
Sbjct: 66 LLHGSFPVRPTSLVKPFAMKPNGFSSFTSHANVPRPPAFSENPRDKALSSTLLNILRKKL 125
Query: 68 KQLGIDCGHCNPGQYGGLSCPM 3
+ LGID C PGQ+ GL CPM
Sbjct: 126 QDLGIDIEACVPGQFSGLLCPM 147
>XP_002268852.1 PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
[Vitis vinifera] CBI31069.3 unnamed protein product,
partial [Vitis vinifera]
Length = 705
Score = 67.4 bits (163), Expect = 1e-10
Identities = 51/132 (38%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Frame = -2
Query: 377 KLNSSVPQLV----QMLV---DYRILMASRHFFLKSTRLPPAAQLLTSRTYSRIICSAFP 219
KL S PQ++ Q LV ILMAS+H LK T P+ L S I SAFP
Sbjct: 9 KLRVSDPQMLLLQQQRLVISSSRTILMASKHL-LKPT---PSTLPLKLNLSSPGIISAFP 64
Query: 218 SKPISNLSPFSLKTSGFSFTPHATTSSPEL-ENPKVETHNFRKLMILNEKLKQLGIDCGH 42
KP S + P SLKT +T H+ P ENP+ +++ +L +L +KL+ +G D
Sbjct: 65 LKPNSRILPISLKTFALPYTSHSNVPGPVYSENPEDTSNSSARLNVLKKKLEVIGFDTQM 124
Query: 41 CNPGQYGGLSCP 6
GQY L+CP
Sbjct: 125 LKTGQYSHLTCP 136
>XP_008445781.1 PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
isoform X1 [Cucumis melo]
Length = 729
Score = 67.4 bits (163), Expect = 1e-10
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = -2
Query: 239 IICSAFPSKPISNLSPFSLKTSGFS-FTPHATTSSPEL--ENPKVETHNFRKLMILNEKL 69
++ +FP +P S + PF++K +GFS FT HA P ENP+ + + L IL +KL
Sbjct: 66 LLHGSFPVRPTSLVKPFAMKPNGFSSFTSHANVPRPPAFSENPRDKALSSTLLNILRKKL 125
Query: 68 KQLGIDCGHCNPGQYGGLSCPM 3
+ LGID C PGQ+ GL CPM
Sbjct: 126 QDLGIDIEACVPGQFSGLLCPM 147
>XP_018827714.1 PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
isoform X2 [Juglans regia]
Length = 743
Score = 67.0 bits (162), Expect = 2e-10
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = -2
Query: 242 RIICSAFPSKPISNLSPFSLKTSGFSFTPHATTSSPE-LENPKVETHNFRKLMILNEKLK 66
R+ S SKP SN+ PF L T+GFS HA P +E+P + +L IL +KL+
Sbjct: 101 RLHFSVHSSKPFSNIQPFPLNTNGFSSISHANIPPPVYMESPTENGLDSAQLKILKQKLE 160
Query: 65 QLGIDCGHCNPGQYGGLSCPM 3
+LG+D C PGQY L CPM
Sbjct: 161 ELGMDSEICVPGQYNHLLCPM 181
>XP_018827713.1 PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
isoform X1 [Juglans regia]
Length = 750
Score = 67.0 bits (162), Expect = 2e-10
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = -2
Query: 242 RIICSAFPSKPISNLSPFSLKTSGFSFTPHATTSSPE-LENPKVETHNFRKLMILNEKLK 66
R+ S SKP SN+ PF L T+GFS HA P +E+P + +L IL +KL+
Sbjct: 101 RLHFSVHSSKPFSNIQPFPLNTNGFSSISHANIPPPVYMESPTENGLDSAQLKILKQKLE 160
Query: 65 QLGIDCGHCNPGQYGGLSCPM 3
+LG+D C PGQY L CPM
Sbjct: 161 ELGMDSEICVPGQYNHLLCPM 181
>XP_015882501.1 PREDICTED: twinkle homolog protein,
chloroplastic/mitochondrial-like, partial [Ziziphus
jujuba]
Length = 495
Score = 66.6 bits (161), Expect = 3e-10
Identities = 43/113 (38%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Frame = -2
Query: 326 ILMASRHFFLKS-----TRLPPAAQLLTSRTYSRIICSAFPSKPISNLSPFSLKTSGFSF 162
+ MAS+ F + T P + TY RI+ S FPSKP S SPF LKT+G
Sbjct: 23 LFMASKQLFKSTFSNPLTTTPCSHNRQLLNTY-RILFSVFPSKPSSRTSPFCLKTNGCYT 81
Query: 161 TPHATTSSPELENPKVETHNFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCPM 3
HA P + E L +KL++LG+D C PGQY L CPM
Sbjct: 82 LSHANVPRPAVLENAEERSLVAMRRRLTQKLEELGMDIEICTPGQYNHLVCPM 134
>XP_012444436.1 PREDICTED: primase homolog protein isoform X2 [Gossypium raimondii]
Length = 414
Score = 66.2 bits (160), Expect = 3e-10
Identities = 45/113 (39%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Frame = -2
Query: 326 ILMASRHFFLKSTRLPPAAQLLTSR---TYSRIICSAFPSKPISNLSPFSLKTSGFSFTP 156
I M S+HF + LPP Q L+ + T S+ + +FPSKPI SL+T+GF P
Sbjct: 27 IFMTSKHFL--PSPLPP--QTLSPKHFSTPSKRLLPSFPSKPIPKNHSLSLRTNGFYSLP 82
Query: 155 HATTSSPE---LENPKVETHNFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCP 6
+ SSP ++ + + + R L ILN KLKQLGID C G+ L CP
Sbjct: 83 SPSVSSPSPAYSQDVEDQPSDTRSLQILNHKLKQLGIDITECVAGRENRLMCP 135
>XP_012444435.1 PREDICTED: primase homolog protein isoform X1 [Gossypium raimondii]
Length = 452
Score = 66.2 bits (160), Expect = 3e-10
Identities = 45/113 (39%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Frame = -2
Query: 326 ILMASRHFFLKSTRLPPAAQLLTSR---TYSRIICSAFPSKPISNLSPFSLKTSGFSFTP 156
I M S+HF + LPP Q L+ + T S+ + +FPSKPI SL+T+GF P
Sbjct: 27 IFMTSKHFL--PSPLPP--QTLSPKHFSTPSKRLLPSFPSKPIPKNHSLSLRTNGFYSLP 82
Query: 155 HATTSSPE---LENPKVETHNFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCP 6
+ SSP ++ + + + R L ILN KLKQLGID C G+ L CP
Sbjct: 83 SPSVSSPSPAYSQDVEDQPSDTRSLQILNHKLKQLGIDITECVAGRENRLMCP 135
>XP_016749800.1 PREDICTED: twinkle homolog protein,
chloroplastic/mitochondrial-like isoform X2 [Gossypium
hirsutum]
Length = 672
Score = 65.5 bits (158), Expect = 7e-10
Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Frame = -2
Query: 326 ILMASRHFFLKSTRLPPAAQLLTSRTYSRIICSAFPSKPISNLSPFSLKTSGFSFTPHAT 147
I M S+HF L S LP T ++ + + SKPI FSL+T+GF P +
Sbjct: 27 IFMTSKHF-LPSPLLPQTLSPKHFSTPTKRLLPSLSSKPIPKNHSFSLRTNGFCSLPSPS 85
Query: 146 TSSP------ELENPKVETHNFRKLMILNEKLKQLGIDCGHCNPGQYGGLSCP 6
SSP +LE+ +T R L ILN KLKQLGID C G+ L CP
Sbjct: 86 VSSPSPAYSQDLEDQPSDT---RSLQILNHKLKQLGIDITECVAGRENRLKCP 135