BLASTX nr result

ID: Panax25_contig00021316 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00021316
         (472 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017230957.1 PREDICTED: probable GTP diphosphokinase CRSH, chl...    80   1e-14
XP_002268377.1 PREDICTED: probable GTP diphosphokinase CRSH, chl...    69   1e-10
XP_010694100.1 PREDICTED: probable GTP diphosphokinase CRSH, chl...    60   9e-08
KNA19521.1 hypothetical protein SOVF_060940 [Spinacia oleracea]        60   1e-07
XP_016454983.1 PREDICTED: probable GTP diphosphokinase CRSH, chl...    60   1e-07
XP_009783243.1 PREDICTED: probable GTP diphosphokinase CRSH, chl...    60   1e-07
XP_019257454.1 PREDICTED: probable GTP diphosphokinase CRSH, chl...    57   1e-06
XP_010241467.1 PREDICTED: probable GTP diphosphokinase CRSH, chl...    57   1e-06
BAC76005.1 RelA-SpoT like protein RSH4, partial [Nicotiana tabacum]    56   3e-06
XP_009625419.1 PREDICTED: probable GTP diphosphokinase CRSH, chl...    56   3e-06

>XP_017230957.1 PREDICTED: probable GTP diphosphokinase CRSH, chloroplastic [Daucus
           carota subsp. sativus] KZN09896.1 hypothetical protein
           DCAR_002552 [Daucus carota subsp. sativus]
          Length = 582

 Score = 80.1 bits (196), Expect = 1e-14
 Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 5/87 (5%)
 Frame = +2

Query: 170 MELNYISDQPLQSISKIRFSTCLPIFTIPQNRAIFRLQTRRRVAGVRVFAIG-----PAT 334
           MEL ++SD+PL SI K   +   P   + Q+R + +   RRR+  VR  AIG     PAT
Sbjct: 1   MELTHLSDRPLHSIPKTNPN---PPLHLLQDRILRKPHFRRRLPAVRACAIGLPAPVPAT 57

Query: 335 LEQPGGKLVVELVGAFNELTERMNINV 415
           LEQPGGK+VVELVGAFNELTERM+++V
Sbjct: 58  LEQPGGKMVVELVGAFNELTERMDMSV 84


>XP_002268377.1 PREDICTED: probable GTP diphosphokinase CRSH, chloroplastic [Vitis
           vinifera] CBI26014.3 unnamed protein product, partial
           [Vitis vinifera]
          Length = 580

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 47/86 (54%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
 Frame = +2

Query: 170 MELNYIS-DQPLQSISKIRFSTCLPIFT-----IPQNRAIFRLQTRRRVAGVRVFAIGPA 331
           MELN  + D PL S SKIR ST LP F      + ++R+     T R+ A     A+G A
Sbjct: 1   MELNIPTIDFPLHSFSKIRVST-LPKFPSNLIFLQRHRSWNAFSTLRQSATA---AVGAA 56

Query: 332 TLEQPGGKLVVELVGAFNELTERMNI 409
           TLEQPGGK+VVELVGAFNELTERM +
Sbjct: 57  TLEQPGGKMVVELVGAFNELTERMKV 82


>XP_010694100.1 PREDICTED: probable GTP diphosphokinase CRSH, chloroplastic [Beta
           vulgaris subsp. vulgaris] KMS98640.1 hypothetical
           protein BVRB_3g070380 [Beta vulgaris subsp. vulgaris]
          Length = 577

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
 Frame = +2

Query: 188 SDQPLQSISKIRFSTCLPIFTIPQNRAIFRLQTRRRVAGVRVFAIG--PAT-LEQPGGKL 358
           +D  L SI    F T +PIF      + F  + +  VAG+R  A    PAT LEQPGGK+
Sbjct: 6   NDFTLHSIPN--FKTLIPIF---HASSTFIRRRKSAVAGIRASATKNIPATVLEQPGGKM 60

Query: 359 VVELVGAFNELTERMNIN 412
           VVELVGAFNEL+ERMN N
Sbjct: 61  VVELVGAFNELSERMNYN 78


>KNA19521.1 hypothetical protein SOVF_060940 [Spinacia oleracea]
          Length = 575

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
 Frame = +2

Query: 230 TCLPIFTIPQNRAIFRLQTRRRVAGVRVFA---IGPATLEQPGGKLVVELVGAFNELTER 400
           T +PIF    + +   L+ R+ VAG+R      I    LEQPGGK+VVELVGAFN+LTER
Sbjct: 19  TLIPIF----HGSTTLLRRRKTVAGIRASVAKEIPTTVLEQPGGKMVVELVGAFNQLTER 74

Query: 401 MNINV 415
           MN NV
Sbjct: 75  MNYNV 79


>XP_016454983.1 PREDICTED: probable GTP diphosphokinase CRSH, chloroplastic
           [Nicotiana tabacum]
          Length = 579

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
 Frame = +2

Query: 170 MELNYISDQPLQSISKIRFSTCLPIFTIPQNRAIFRLQTRRRVAGVRVFAIGPA---TLE 340
           MEL +++D  L  I K      LP F     R  FR Q+  ++A VRV A   A   T E
Sbjct: 1   MEL-HLNDYTLHFIKKKSTQLLLPKFPRYLRRR-FRRQSPTKIATVRVSASAEALVATPE 58

Query: 341 QPGGKLVVELVGAFNELTERMNINV 415
           QPGGK+VVELVGAFNELTERM+  V
Sbjct: 59  QPGGKMVVELVGAFNELTERMDNKV 83


>XP_009783243.1 PREDICTED: probable GTP diphosphokinase CRSH, chloroplastic
           [Nicotiana sylvestris]
          Length = 579

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
 Frame = +2

Query: 170 MELNYISDQPLQSISKIRFSTCLPIFTIPQNRAIFRLQTRRRVAGVRVFAIGPA---TLE 340
           MEL +++D  L  I K      LP F     R  FR Q+  ++A VRV A   A   T E
Sbjct: 1   MEL-HLNDYTLHFIKKKSTQLLLPKFPRYLRRR-FRRQSPTKIATVRVSASAEALVATPE 58

Query: 341 QPGGKLVVELVGAFNELTERMNINV 415
           QPGGK+VVELVGAFNELTERM+  V
Sbjct: 59  QPGGKMVVELVGAFNELTERMDNKV 83


>XP_019257454.1 PREDICTED: probable GTP diphosphokinase CRSH, chloroplastic
           [Nicotiana attenuata] OIS96419.1 putative gtp
           diphosphokinase crsh, chloroplastic [Nicotiana
           attenuata]
          Length = 578

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
 Frame = +2

Query: 170 MELNYISDQPLQSISKIRFSTCLPIFTIPQN-RAIFRLQTRRRVAGVRVFAIGPA---TL 337
           MEL +++D  L  I K   ST L +   P   R   R Q+  R+A VRV A   A   T 
Sbjct: 1   MEL-HLNDYTLHFIKK---STHLHLPKFPHYLRRRLRRQSPTRIATVRVSASAEALVATP 56

Query: 338 EQPGGKLVVELVGAFNELTERMNINV 415
           EQPGGK+VVELVGAFNELTERM+  V
Sbjct: 57  EQPGGKMVVELVGAFNELTERMDNKV 82


>XP_010241467.1 PREDICTED: probable GTP diphosphokinase CRSH, chloroplastic
           [Nelumbo nucifera]
          Length = 583

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
 Frame = +2

Query: 197 PLQSISKIRFSTCLPIFTIPQNRAIFRLQTRRRVAGVRVF-------AIGPATLEQPGGK 355
           P   +S+ RF     +   PQ   I + Q R    GVRV        A  P  LEQPGGK
Sbjct: 14  PKARVSRARFL----LLRCPQGVLIRKRQRRILSGGVRVSVFRVFATAKAPMALEQPGGK 69

Query: 356 LVVELVGAFNELTERMNI 409
           +V+ELVGAFNELTER+N+
Sbjct: 70  MVMELVGAFNELTERINV 87


>BAC76005.1 RelA-SpoT like protein RSH4, partial [Nicotiana tabacum]
          Length = 552

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/54 (61%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
 Frame = +2

Query: 263 RAIFRLQTRRRVAGVRVFAIGPA---TLEQPGGKLVVELVGAFNELTERMNINV 415
           R  FR Q+  ++A VRV A   A   T EQPGGK+VVELVGAFNELTERM+  V
Sbjct: 3   RRRFRRQSPTKIATVRVSASAEALVATPEQPGGKMVVELVGAFNELTERMDNKV 56


>XP_009625419.1 PREDICTED: probable GTP diphosphokinase CRSH, chloroplastic
           [Nicotiana tomentosiformis] XP_016513449.1 PREDICTED:
           probable GTP diphosphokinase CRSH, chloroplastic
           [Nicotiana tabacum]
          Length = 574

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
 Frame = +2

Query: 170 MELNYISDQPLQSISKIRFSTCLPIFTIPQNRAIFRLQTRRRVAGVRVFAIGPA---TLE 340
           MEL +++D  L  I K   ST L +   P      R ++  ++A VRV A G A   T E
Sbjct: 1   MEL-HLNDYTLHFIKK---STHLHLPKFPH---CLRRRSPSKIATVRVSASGEALVATPE 53

Query: 341 QPGGKLVVELVGAFNELTERMNINV 415
           QPGGK+VVELVGAFNELTERM+  V
Sbjct: 54  QPGGKMVVELVGAFNELTERMDNKV 78


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