BLASTX nr result

ID: Panax25_contig00021070 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00021070
         (397 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZN02620.1 hypothetical protein DCAR_011374 [Daucus carota subsp...    58   4e-07
XP_017241880.1 PREDICTED: DExH-box ATP-dependent RNA helicase DE...    58   4e-07
CDO98393.1 unnamed protein product [Coffea canephora]                  55   5e-06
XP_019177048.1 PREDICTED: DExH-box ATP-dependent RNA helicase DE...    54   6e-06

>KZN02620.1 hypothetical protein DCAR_011374 [Daucus carota subsp. sativus]
          Length = 1163

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -2

Query: 90  TGLVDNVESYNTWSHDEHLIRAITCAGLFP 1
           TGLVD+V+  N+WSHDEHLIRAITCAGL+P
Sbjct: 864 TGLVDDVDKCNSWSHDEHLIRAITCAGLYP 893


>XP_017241880.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH3 [Daucus carota
           subsp. sativus]
          Length = 1180

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -2

Query: 90  TGLVDNVESYNTWSHDEHLIRAITCAGLFP 1
           TGLVD+V+  N+WSHDEHLIRAITCAGL+P
Sbjct: 881 TGLVDDVDKCNSWSHDEHLIRAITCAGLYP 910


>CDO98393.1 unnamed protein product [Coffea canephora]
          Length = 1212

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = -2

Query: 87   GLVDNVESYNTWSHDEHLIRAITCAGLFP 1
            GLVD++ES N WSHD+HLIRA+ CAGLFP
Sbjct: 914  GLVDDIESCNQWSHDQHLIRAVICAGLFP 942


>XP_019177048.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH3 [Ipomoea nil]
          Length = 1192

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = -2

Query: 90  TGLVDNVESYNTWSHDEHLIRAITCAGLFP 1
           +GLVD+ ES N WSHDEHL+RAI CAGLFP
Sbjct: 889 SGLVDSGESCNIWSHDEHLVRAIVCAGLFP 918


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