BLASTX nr result

ID: Panax25_contig00021061 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00021061
         (612 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM82434.1 hypothetical protein DCAR_030003 [Daucus carota subsp...   103   4e-22
KHG03690.1 Putative RNA-binding protein Luc7-like 1 [Gossypium a...    62   5e-08

>KZM82434.1 hypothetical protein DCAR_030003 [Daucus carota subsp. sativus]
          Length = 507

 Score =  103 bits (256), Expect = 4e-22
 Identities = 57/88 (64%), Positives = 63/88 (71%)
 Frame = +3

Query: 66  DQKSEAGIMIEKEVGIEEEAVNGKGTMIAGAEIVTGIMT*IVGMIENVTKRETSHAAMIQ 245
           DQKS AG +IEK  GIEE  V  +G MIAGAE  TG++T I+GMIENV +R T  AA IQ
Sbjct: 402 DQKSRAGNVIEKVAGIEEAVVKEQGIMIAGAETATGMLTVIMGMIENVKERGTDPAATIQ 461

Query: 246 GVVGDHVHDQGSVLGTTIATAGAMIDTS 329
           GVV  HVHDQ S LG  IA AG MIDTS
Sbjct: 462 GVVVGHVHDQESELGIMIAIAGVMIDTS 489


>KHG03690.1 Putative RNA-binding protein Luc7-like 1 [Gossypium arboreum]
          Length = 292

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/83 (49%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
 Frame = +3

Query: 63  EDQKSEAGIMIEKEVGI--EEEAVNGKGTMIAGAEIVTGIMT*IVGMIENVTKRETSHAA 236
           EDQ++  GI+ E  VGI  EE AV   G MI GA I  GIM  IV MI  V +   +HA 
Sbjct: 191 EDQRNGVGIVKESPVGIVIEERAVIEGGIMIVGAGIRIGIMNEIVDMIGTVREIMNAHAV 250

Query: 237 MIQGVVGDHVHDQGSVLGTTIAT 305
           MIQ VV  HV   G++LG  I T
Sbjct: 251 MIQEVVVGHVLGLGNILGIMIGT 273


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