BLASTX nr result

ID: Panax25_contig00021038 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00021038
         (402 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019175244.1 PREDICTED: AT-hook motif nuclear-localized protei...    61   3e-08
CDP11496.1 unnamed protein product [Coffea canephora]                  57   6e-07
ABL63120.1 AT-hook DNA-binding protein [Catharanthus roseus]           57   8e-07

>XP_019175244.1 PREDICTED: AT-hook motif nuclear-localized protein 17-like [Ipomoea
           nil]
          Length = 339

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 14/67 (20%)
 Frame = -3

Query: 160 IMKGDYGDEDKDHTNTMFAKIHQTQKFQ-----------PYPTPNTSAARHH-FQL--TT 23
           +MKG+Y +E KDH+NTMFAK+HQTQKF            P P P      HH FQ+    
Sbjct: 1   MMKGEYVEEMKDHSNTMFAKLHQTQKFHHHHHPYHQPPPPPPQPQAQPTFHHPFQVAAAA 60

Query: 22  RECQTSE 2
           RECQTSE
Sbjct: 61  RECQTSE 67


>CDP11496.1 unnamed protein product [Coffea canephora]
          Length = 329

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 31/56 (55%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
 Frame = -3

Query: 157 MKGDYGDEDKD-HTNTMFAKIHQTQKF---QPYPTPNTSAARHHFQLTTRECQTSE 2
           MKGDY  E+KD H+N MFAK+HQTQKF    P P P  +   HH     RECQ SE
Sbjct: 1   MKGDYVKEEKDGHSNPMFAKLHQTQKFLHHPPPPQPQPTTLLHH-SFNPRECQASE 55


>ABL63120.1 AT-hook DNA-binding protein [Catharanthus roseus]
          Length = 335

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 8/60 (13%)
 Frame = -3

Query: 157 MKGDYGDEDKDHTNTMFAKIHQTQKFQPYPTPNTSAARHH--------FQLTTRECQTSE 2
           MKG+Y  ++KD+ ++MFAK+HQTQKF  +P+P   +A HH        FQ+  RECQ SE
Sbjct: 1   MKGEYVKDEKDNHSSMFAKLHQTQKFHHHPSPPHPSALHHHNNHHHNSFQV-PRECQNSE 59


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