BLASTX nr result
ID: Panax25_contig00020981
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00020981
(356 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017227702.1 PREDICTED: sister chromatid cohesion 1 protein 4-... 76 8e-14
XP_017227701.1 PREDICTED: sister chromatid cohesion 1 protein 4-... 76 8e-14
XP_017227700.1 PREDICTED: sister chromatid cohesion 1 protein 4-... 76 8e-14
KZN09487.1 hypothetical protein DCAR_002143 [Daucus carota subsp... 75 3e-13
XP_017229146.1 PREDICTED: sister chromatid cohesion 1 protein 4-... 75 3e-13
XP_008218496.1 PREDICTED: sister chromatid cohesion 1 protein 4 ... 65 5e-10
ONI05290.1 hypothetical protein PRUPE_6G366000 [Prunus persica] 65 9e-10
XP_007206446.1 hypothetical protein PRUPE_ppa000650mg [Prunus pe... 65 9e-10
ONI05289.1 hypothetical protein PRUPE_6G366000 [Prunus persica] 65 9e-10
XP_011466095.1 PREDICTED: sister chromatid cohesion 1 protein 4 ... 59 1e-07
XP_011466093.1 PREDICTED: sister chromatid cohesion 1 protein 4 ... 59 1e-07
XP_004304829.1 PREDICTED: sister chromatid cohesion 1 protein 4 ... 59 1e-07
AEY85029.1 cohesin subunit [Camellia sinensis] 58 2e-07
>XP_017227702.1 PREDICTED: sister chromatid cohesion 1 protein 4-like isoform X3
[Daucus carota subsp. sativus]
Length = 1242
Score = 76.3 bits (186), Expect = 8e-14
Identities = 47/118 (39%), Positives = 68/118 (57%)
Frame = -1
Query: 356 TMEQISLVNIDSPSLIPSALGDQVKVKTMTPYLSDKTFAASDIPDRVEDLQNGVVINDEP 177
T+E L DS SLI A + V+ M +K AA I + ED+QNG++ N++P
Sbjct: 346 TVESSLLGKSDSISLIAPASANPVEDMVM-----NKICAAPAILNGAEDIQNGIISNNKP 400
Query: 176 GMHSDDKAHEDCVELQVVRLGESNISISSLKSTCQPVSEESLENNQAYLKTELSNDME 3
+ + K EDC+E+Q V LG++N L +TCQ VSE L+N+ +TE SND+E
Sbjct: 401 EISFNAKTSEDCLEVQGVGLGKTNTGTYDLNNTCQQVSEVFLKNHGTSNQTEFSNDVE 458
>XP_017227701.1 PREDICTED: sister chromatid cohesion 1 protein 4-like isoform X2
[Daucus carota subsp. sativus]
Length = 1254
Score = 76.3 bits (186), Expect = 8e-14
Identities = 47/118 (39%), Positives = 68/118 (57%)
Frame = -1
Query: 356 TMEQISLVNIDSPSLIPSALGDQVKVKTMTPYLSDKTFAASDIPDRVEDLQNGVVINDEP 177
T+E L DS SLI A + V+ M +K AA I + ED+QNG++ N++P
Sbjct: 345 TVESSLLGKSDSISLIAPASANPVEDMVM-----NKICAAPAILNGAEDIQNGIISNNKP 399
Query: 176 GMHSDDKAHEDCVELQVVRLGESNISISSLKSTCQPVSEESLENNQAYLKTELSNDME 3
+ + K EDC+E+Q V LG++N L +TCQ VSE L+N+ +TE SND+E
Sbjct: 400 EISFNAKTSEDCLEVQGVGLGKTNTGTYDLNNTCQQVSEVFLKNHGTSNQTEFSNDVE 457
>XP_017227700.1 PREDICTED: sister chromatid cohesion 1 protein 4-like isoform X1
[Daucus carota subsp. sativus] KZM80802.1 hypothetical
protein DCAR_031598 [Daucus carota subsp. sativus]
Length = 1255
Score = 76.3 bits (186), Expect = 8e-14
Identities = 47/118 (39%), Positives = 68/118 (57%)
Frame = -1
Query: 356 TMEQISLVNIDSPSLIPSALGDQVKVKTMTPYLSDKTFAASDIPDRVEDLQNGVVINDEP 177
T+E L DS SLI A + V+ M +K AA I + ED+QNG++ N++P
Sbjct: 346 TVESSLLGKSDSISLIAPASANPVEDMVM-----NKICAAPAILNGAEDIQNGIISNNKP 400
Query: 176 GMHSDDKAHEDCVELQVVRLGESNISISSLKSTCQPVSEESLENNQAYLKTELSNDME 3
+ + K EDC+E+Q V LG++N L +TCQ VSE L+N+ +TE SND+E
Sbjct: 401 EISFNAKTSEDCLEVQGVGLGKTNTGTYDLNNTCQQVSEVFLKNHGTSNQTEFSNDVE 458
>KZN09487.1 hypothetical protein DCAR_002143 [Daucus carota subsp. sativus]
Length = 1211
Score = 74.7 bits (182), Expect = 3e-13
Identities = 48/113 (42%), Positives = 58/113 (51%)
Frame = -1
Query: 341 SLVNIDSPSLIPSALGDQVKVKTMTPYLSDKTFAASDIPDRVEDLQNGVVINDEPGMHSD 162
S V D PS+ GD V + S T A IP VED+QNG N +
Sbjct: 289 SRVETDLPSMFSPTSGDPVGAIAVENNSSLNTCLAPSIPKGVEDVQNGNHSNHNCHVSFA 348
Query: 161 DKAHEDCVELQVVRLGESNISISSLKSTCQPVSEESLENNQAYLKTELSNDME 3
DK EDC ELQ VR GE NI +L T +PVSE L+ N+ K ELSN++E
Sbjct: 349 DKTCEDCQELQEVRPGEHNIGNPNLSITSEPVSEGILKENEILYKVELSNNVE 401
>XP_017229146.1 PREDICTED: sister chromatid cohesion 1 protein 4-like [Daucus
carota subsp. sativus]
Length = 1234
Score = 74.7 bits (182), Expect = 3e-13
Identities = 48/113 (42%), Positives = 58/113 (51%)
Frame = -1
Query: 341 SLVNIDSPSLIPSALGDQVKVKTMTPYLSDKTFAASDIPDRVEDLQNGVVINDEPGMHSD 162
S V D PS+ GD V + S T A IP VED+QNG N +
Sbjct: 312 SRVETDLPSMFSPTSGDPVGAIAVENNSSLNTCLAPSIPKGVEDVQNGNHSNHNCHVSFA 371
Query: 161 DKAHEDCVELQVVRLGESNISISSLKSTCQPVSEESLENNQAYLKTELSNDME 3
DK EDC ELQ VR GE NI +L T +PVSE L+ N+ K ELSN++E
Sbjct: 372 DKTCEDCQELQEVRPGEHNIGNPNLSITSEPVSEGILKENEILYKVELSNNVE 424
>XP_008218496.1 PREDICTED: sister chromatid cohesion 1 protein 4 [Prunus mume]
Length = 1149
Score = 65.5 bits (158), Expect = 5e-10
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 17/111 (15%)
Frame = -1
Query: 284 KVKTMTPYL--SDKTFAASDIPDRVEDLQNGVVINDEPGMHSDDKAHEDCVELQVVRLGE 111
++K ++P L ++ T A D P+RVED+ NG+VIN+EP M D+ VE VVRL E
Sbjct: 331 QIKPISPVLECANGTVGALDCPNRVEDIYNGIVINNEPAMLFLDQKDAQSVEPAVVRLDE 390
Query: 110 SNISISSLK---------------STCQPVSEESLENNQAYLKTELSNDME 3
+ S S + S+C VSE+ LE+ Q LK E+ ND+E
Sbjct: 391 TVASPSCSQVTYELEDPARKICSNSSCARVSEDYLEDQQTSLKPEIQNDVE 441
>ONI05290.1 hypothetical protein PRUPE_6G366000 [Prunus persica]
Length = 1038
Score = 64.7 bits (156), Expect = 9e-10
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 17/111 (15%)
Frame = -1
Query: 284 KVKTMTPYL--SDKTFAASDIPDRVEDLQNGVVINDEPGMHSDDKAHEDCVELQVVRLGE 111
++K ++P L ++ T A D P+RVED+ NG+VIN+EP M D+ VE VVRL E
Sbjct: 331 QIKPISPVLECANGTVGALDCPNRVEDIYNGIVINNEPAMLFLDQKDAQSVEPAVVRLDE 390
Query: 110 SNISISSLK---------------STCQPVSEESLENNQAYLKTELSNDME 3
S S + S+C VSE+ LE+ Q LK E+ ND+E
Sbjct: 391 PVASPSCSQVTYELEDPARKICSNSSCARVSEDYLEDQQTSLKPEIQNDVE 441
>XP_007206446.1 hypothetical protein PRUPE_ppa000650mg [Prunus persica]
Length = 1052
Score = 64.7 bits (156), Expect = 9e-10
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 17/111 (15%)
Frame = -1
Query: 284 KVKTMTPYL--SDKTFAASDIPDRVEDLQNGVVINDEPGMHSDDKAHEDCVELQVVRLGE 111
++K ++P L ++ T A D P+RVED+ NG+VIN+EP M D+ VE VVRL E
Sbjct: 229 QIKPISPVLECANGTVGALDCPNRVEDIYNGIVINNEPAMLFLDQKDAQSVEPAVVRLDE 288
Query: 110 SNISISSLK---------------STCQPVSEESLENNQAYLKTELSNDME 3
S S + S+C VSE+ LE+ Q LK E+ ND+E
Sbjct: 289 PVASPSCSQVTYELEDPARKICSNSSCARVSEDYLEDQQTSLKPEIQNDVE 339
>ONI05289.1 hypothetical protein PRUPE_6G366000 [Prunus persica]
Length = 1154
Score = 64.7 bits (156), Expect = 9e-10
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 17/111 (15%)
Frame = -1
Query: 284 KVKTMTPYL--SDKTFAASDIPDRVEDLQNGVVINDEPGMHSDDKAHEDCVELQVVRLGE 111
++K ++P L ++ T A D P+RVED+ NG+VIN+EP M D+ VE VVRL E
Sbjct: 331 QIKPISPVLECANGTVGALDCPNRVEDIYNGIVINNEPAMLFLDQKDAQSVEPAVVRLDE 390
Query: 110 SNISISSLK---------------STCQPVSEESLENNQAYLKTELSNDME 3
S S + S+C VSE+ LE+ Q LK E+ ND+E
Sbjct: 391 PVASPSCSQVTYELEDPARKICSNSSCARVSEDYLEDQQTSLKPEIQNDVE 441
>XP_011466095.1 PREDICTED: sister chromatid cohesion 1 protein 4 isoform X3
[Fragaria vesca subsp. vesca]
Length = 1140
Score = 58.9 bits (141), Expect = 1e-07
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 17/110 (15%)
Frame = -1
Query: 284 KVKTMTPYL--SDKTFAASDIPDRVEDLQNGVVINDEPGMHSDDKAHEDCVELQVVRLGE 111
++K ++P L S+ T A D P+RVED+ G+VIN E M ++ K E CVE VRL E
Sbjct: 313 QIKPVSPALECSNGTVGALDFPNRVEDINCGIVINSEATMLTEKKG-EQCVEPAGVRLDE 371
Query: 110 SNISIS---------------SLKSTCQPVSEESLENNQAYLKTELSNDM 6
+ S S S TC V E+ +E+ Q LK+E+ ND+
Sbjct: 372 TVASPSCSQVTSELEESARKISSSGTCVQVPEDYMEDQQTSLKSEIQNDI 421
>XP_011466093.1 PREDICTED: sister chromatid cohesion 1 protein 4 isoform X2
[Fragaria vesca subsp. vesca]
Length = 1154
Score = 58.9 bits (141), Expect = 1e-07
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 17/110 (15%)
Frame = -1
Query: 284 KVKTMTPYL--SDKTFAASDIPDRVEDLQNGVVINDEPGMHSDDKAHEDCVELQVVRLGE 111
++K ++P L S+ T A D P+RVED+ G+VIN E M ++ K E CVE VRL E
Sbjct: 327 QIKPVSPALECSNGTVGALDFPNRVEDINCGIVINSEATMLTEKKG-EQCVEPAGVRLDE 385
Query: 110 SNISIS---------------SLKSTCQPVSEESLENNQAYLKTELSNDM 6
+ S S S TC V E+ +E+ Q LK+E+ ND+
Sbjct: 386 TVASPSCSQVTSELEESARKISSSGTCVQVPEDYMEDQQTSLKSEIQNDI 435
>XP_004304829.1 PREDICTED: sister chromatid cohesion 1 protein 4 isoform X1
[Fragaria vesca subsp. vesca]
Length = 1155
Score = 58.9 bits (141), Expect = 1e-07
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 17/110 (15%)
Frame = -1
Query: 284 KVKTMTPYL--SDKTFAASDIPDRVEDLQNGVVINDEPGMHSDDKAHEDCVELQVVRLGE 111
++K ++P L S+ T A D P+RVED+ G+VIN E M ++ K E CVE VRL E
Sbjct: 328 QIKPVSPALECSNGTVGALDFPNRVEDINCGIVINSEATMLTEKKG-EQCVEPAGVRLDE 386
Query: 110 SNISIS---------------SLKSTCQPVSEESLENNQAYLKTELSNDM 6
+ S S S TC V E+ +E+ Q LK+E+ ND+
Sbjct: 387 TVASPSCSQVTSELEESARKISSSGTCVQVPEDYMEDQQTSLKSEIQNDI 436
>AEY85029.1 cohesin subunit [Camellia sinensis]
Length = 1336
Score = 58.2 bits (139), Expect = 2e-07
Identities = 51/136 (37%), Positives = 65/136 (47%), Gaps = 28/136 (20%)
Frame = -1
Query: 326 DSPSLIPSALGDQVKVKTMTPY--LSDKTFAASDIPDRVEDLQNGVVINDEPGMHSDDKA 153
DSPS + L + V+ +TP D+ F A D + VEDLQ VV N+ P + D A
Sbjct: 354 DSPSSAGNLLSAE-PVEAITPVSEFPDENFTAFDKENEVEDLQKEVVSNNVPITQTIDVA 412
Query: 152 HEDCVELQVVRLGES-------------------------NIS-ISSLKSTCQPVSEESL 51
+ D +E Q +RLG + NIS SSL STCQ SE L
Sbjct: 413 NADGIEPQGIRLGGTVSSPNFSDKAPVLEDPFGNSCTAIKNISEKSSLSSTCQTASECIL 472
Query: 50 ENNQAYLKTELSNDME 3
+ NQA L ELSN +E
Sbjct: 473 QINQASLMPELSNSVE 488