BLASTX nr result

ID: Panax25_contig00020875 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00020875
         (458 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017249808.1 PREDICTED: THO complex subunit 7B-like [Daucus ca...    59   1e-07
XP_017244327.1 PREDICTED: THO complex subunit 7B-like isoform X2...    59   2e-07
KZM92898.1 hypothetical protein DCAR_016143 [Daucus carota subsp...    59   2e-07
XP_017244325.1 PREDICTED: THO complex subunit 7B-like isoform X1...    59   2e-07
CDP09699.1 unnamed protein product [Coffea canephora]                  55   3e-06
XP_019199510.1 PREDICTED: THO complex subunit 7A-like [Ipomoea n...    54   6e-06
XP_019258991.1 PREDICTED: THO complex subunit 7A-like [Nicotiana...    54   9e-06

>XP_017249808.1 PREDICTED: THO complex subunit 7B-like [Daucus carota subsp.
           sativus]
          Length = 240

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   EEEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 105
           EEEPRSL+E+MRNAM++HKNGVEDAS   +AMAVD
Sbjct: 206 EEEPRSLMEEMRNAMEDHKNGVEDASCGPDAMAVD 240


>XP_017244327.1 PREDICTED: THO complex subunit 7B-like isoform X2 [Daucus carota
           subsp. sativus]
          Length = 240

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   EEEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 105
           EEEPRSL+E+MRNAM++HKNG+EDAS   +AMAVD
Sbjct: 206 EEEPRSLMEEMRNAMEDHKNGIEDASCGPDAMAVD 240


>KZM92898.1 hypothetical protein DCAR_016143 [Daucus carota subsp. sativus]
          Length = 296

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   EEEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 105
           EEEPRSL+E+MRNAM++HKNGVEDAS   +AMAVD
Sbjct: 262 EEEPRSLMEEMRNAMEDHKNGVEDASCGPDAMAVD 296


>XP_017244325.1 PREDICTED: THO complex subunit 7B-like isoform X1 [Daucus carota
           subsp. sativus]
          Length = 277

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   EEEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 105
           EEEPRSL+E+MRNAM++HKNG+EDAS   +AMAVD
Sbjct: 243 EEEPRSLMEEMRNAMEDHKNGIEDASCGPDAMAVD 277


>CDP09699.1 unnamed protein product [Coffea canephora]
          Length = 241

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +1

Query: 1   EEEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 105
           EEE RSL+E+MR  +DEHKNGVEDA+G  EAM VD
Sbjct: 207 EEEQRSLVEEMRMVIDEHKNGVEDANGGPEAMTVD 241


>XP_019199510.1 PREDICTED: THO complex subunit 7A-like [Ipomoea nil] XP_019199511.1
           PREDICTED: THO complex subunit 7A-like [Ipomoea nil]
           XP_019199512.1 PREDICTED: THO complex subunit 7A-like
           [Ipomoea nil]
          Length = 241

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = +1

Query: 1   EEEPRSLIEDMRNAMDEHKNGVEDASGASEAMAVD 105
           EEE RSL+E+MR AMD+HKNGVED     EAMAVD
Sbjct: 207 EEEQRSLVEEMRAAMDDHKNGVEDTGAVPEAMAVD 241


>XP_019258991.1 PREDICTED: THO complex subunit 7A-like [Nicotiana attenuata]
           XP_019258992.1 PREDICTED: THO complex subunit 7A-like
           [Nicotiana attenuata] XP_019258993.1 PREDICTED: THO
           complex subunit 7A-like [Nicotiana attenuata]
           XP_019258994.1 PREDICTED: THO complex subunit 7A-like
           [Nicotiana attenuata] OIT40158.1 tho complex subunit 7a
           [Nicotiana attenuata]
          Length = 242

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 26/36 (72%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
 Frame = +1

Query: 1   EEEPRSLIEDMRNAMDEH-KNGVEDASGASEAMAVD 105
           EEE RSL+E+MRNA+D+H KNG+EDA+G  EAMAVD
Sbjct: 207 EEEQRSLVEEMRNAVDDHNKNGLEDATGGLEAMAVD 242


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