BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00020707
         (428 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KVH95631.1 F-box domain, cyclin-like protein [Cynara cardunculus...    56   2e-06

>KVH95631.1 F-box domain, cyclin-like protein [Cynara cardunculus var.
           scolymus]
          Length = 593

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
 Frame = -3

Query: 426 PTLTTLHFEDVTFQKD----TVLSFEGFVHLKNLTFKVKLTWHGMEVLFITSLSLANLTI 259
           P LTTLH ++V F  D    +V  F   V+LKNL   +      + V  I +  L+NLT+
Sbjct: 163 PALTTLHIQEVVFSGDMTEMSVDLFSKCVNLKNLKLHL-FDADRVAVFDIITPKLSNLTL 221

Query: 258 S--------------QNYVELRSCLFVISAP-NLLCLEYSGNSPLLLSAEDGFPCLEQVN 124
           +              +N       +  ++AP  L  L YSG+SP+ L  E GF  L +V+
Sbjct: 222 TNSNFNHINVTAPELENLTATNCSIKKLNAPTGLSSLTYSGSSPVQLK-EYGFDSLNKVS 280

Query: 123 LDIDIYRYGSKKYFEENKQVIFQ*LISLFQEIHGAKFLTLS 1
           + + IYR   + Y EE    + +  I++   +H A+FLTL+
Sbjct: 281 IHLSIYR-SRRPYKEE----VARKTINMLHGVHSARFLTLN 316