BLASTX nr result

ID: Panax25_contig00019980 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00019980
         (668 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017227859.1 PREDICTED: zinc finger CCCH domain-containing pro...    80   7e-14
XP_017244191.1 PREDICTED: uncharacterized protein LOC108216044 [...    79   3e-13
CBI27895.3 unnamed protein product, partial [Vitis vinifera]           64   3e-08
XP_010656180.1 PREDICTED: zinc finger CCCH domain-containing pro...    64   3e-08
XP_010656177.1 PREDICTED: zinc finger CCCH domain-containing pro...    64   3e-08

>XP_017227859.1 PREDICTED: zinc finger CCCH domain-containing protein 7-like [Daucus
            carota subsp. sativus] KZM81113.1 hypothetical protein
            DCAR_031337 [Daucus carota subsp. sativus]
          Length = 928

 Score = 80.5 bits (197), Expect = 7e-14
 Identities = 57/127 (44%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
 Frame = +2

Query: 2    EDNAVPPTVHERVSVTNKFQIRNXXXXXXXXXXXXHGQSME----RSKNTLSFSQGPLVS 169
            E+NA+ PTV    SV++K +  N            +    +    +SK + S  QG L S
Sbjct: 806  ENNAMHPTVRNNESVSDKLRNLNLLLPPVLSPLPSNHSLSKLTDVQSKGSSSSLQGSLFS 865

Query: 170  NTPSSVQKALRSTLAFAAKFQSQVKKDRSYDTPAVGTDLSRE-ASSSQNKSMKNASTILD 346
            NTPSS+Q+A +STLA AAKF+S+ K        AV TDL++E +SSSQN SMK  STILD
Sbjct: 866  NTPSSLQRAFQSTLALAAKFESKAKN-------AVSTDLNKEGSSSSQNNSMK-PSTILD 917

Query: 347  FLYGVNS 367
            FLY   S
Sbjct: 918  FLYSSKS 924


>XP_017244191.1 PREDICTED: uncharacterized protein LOC108216044 [Daucus carota subsp.
            sativus] XP_017244192.1 PREDICTED: uncharacterized
            protein LOC108216044 [Daucus carota subsp. sativus]
            KZM97588.1 hypothetical protein DCAR_015050 [Daucus
            carota subsp. sativus]
          Length = 922

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
 Frame = +2

Query: 2    EDNAVPPTVHERVSVTNKFQIRNXXXXXXXXXXXXHGQSMER-----SKNTLSFSQGPLV 166
            E+NA+ PTV    SV++K +  +               S+ +     SK + S  QG L 
Sbjct: 799  ENNAMHPTVRNNESVSDKHRTFDLLLPPVLSSPLPSNHSLSKLTDVQSKGSSSSLQGSLF 858

Query: 167  SNTPSSVQKALRSTLAFAAKFQSQVKKDRSYDTPAVGTDLSREASSSQNKSMKNASTILD 346
            SNTP S+Q+A +STLA AAKF+S+ K        AV TDLS+E SS+ + +    STILD
Sbjct: 859  SNTPKSLQRAFQSTLALAAKFESKAKN-------AVSTDLSKEGSSNSHNNSMKPSTILD 911

Query: 347  FLY 355
            FLY
Sbjct: 912  FLY 914


>CBI27895.3 unnamed protein product, partial [Vitis vinifera]
          Length = 675

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 6/68 (8%)
 Frame = +2

Query: 170 NTPSSVQKALRSTLAFAAKFQSQVKKDRSYDTPAVGTDLSRE------ASSSQNKSMKNA 331
           +T SS QKAL STLAFAAK++S +K DRS   P+V  + ++E      +  SQNKSM NA
Sbjct: 601 DTSSSAQKALLSTLAFAAKYESALKIDRSIVAPSVSMEANKEIRNVSNSGGSQNKSM-NA 659

Query: 332 STILDFLY 355
           STILDFL+
Sbjct: 660 STILDFLF 667


>XP_010656180.1 PREDICTED: zinc finger CCCH domain-containing protein 65 isoform X2
            [Vitis vinifera] XP_019078732.1 PREDICTED: zinc finger
            CCCH domain-containing protein 65 isoform X2 [Vitis
            vinifera]
          Length = 877

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 6/68 (8%)
 Frame = +2

Query: 170  NTPSSVQKALRSTLAFAAKFQSQVKKDRSYDTPAVGTDLSRE------ASSSQNKSMKNA 331
            +T SS QKAL STLAFAAK++S +K DRS   P+V  + ++E      +  SQNKSM NA
Sbjct: 803  DTSSSAQKALLSTLAFAAKYESALKIDRSIVAPSVSMEANKEIRNVSNSGGSQNKSM-NA 861

Query: 332  STILDFLY 355
            STILDFL+
Sbjct: 862  STILDFLF 869


>XP_010656177.1 PREDICTED: zinc finger CCCH domain-containing protein 7 isoform X1
            [Vitis vinifera] XP_010656178.1 PREDICTED: zinc finger
            CCCH domain-containing protein 7 isoform X1 [Vitis
            vinifera] XP_010656179.1 PREDICTED: zinc finger CCCH
            domain-containing protein 7 isoform X1 [Vitis vinifera]
          Length = 959

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 6/68 (8%)
 Frame = +2

Query: 170  NTPSSVQKALRSTLAFAAKFQSQVKKDRSYDTPAVGTDLSRE------ASSSQNKSMKNA 331
            +T SS QKAL STLAFAAK++S +K DRS   P+V  + ++E      +  SQNKSM NA
Sbjct: 885  DTSSSAQKALLSTLAFAAKYESALKIDRSIVAPSVSMEANKEIRNVSNSGGSQNKSM-NA 943

Query: 332  STILDFLY 355
            STILDFL+
Sbjct: 944  STILDFLF 951


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