BLASTX nr result

ID: Panax25_contig00019925 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00019925
         (635 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_012835711.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    83   6e-15
XP_002273443.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    80   9e-14
CBI19889.3 unnamed protein product, partial [Vitis vinifera]           80   9e-14
XP_002306942.1 hypothetical protein POPTR_0005s26280g [Populus t...    78   3e-13
XP_019152959.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    78   4e-13
XP_015577149.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    78   4e-13
EEF52741.1 dead box ATP-dependent RNA helicase, putative [Ricinu...    78   4e-13
XP_011045064.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    77   5e-13
XP_011045063.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    77   5e-13
GAV81604.1 DEAD domain-containing protein/Helicase_C domain-cont...    76   1e-12
XP_006342065.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    74   6e-12
XP_002301963.2 hypothetical protein POPTR_0002s02160g [Populus t...    72   8e-12
OMO75436.1 hypothetical protein COLO4_26129 [Corchorus olitorius]      74   1e-11
XP_012075065.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    74   1e-11
XP_008361683.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    68   2e-11
XP_011083581.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    72   3e-11
XP_016568360.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    72   4e-11
XP_009591539.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    72   5e-11
XP_004238369.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    72   5e-11
XP_015074090.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28...    72   5e-11

>XP_012835711.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Erythranthe
           guttata] EYU38793.1 hypothetical protein
           MIMGU_mgv1a001839mg [Erythranthe guttata]
          Length = 751

 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 42/71 (59%), Positives = 50/71 (70%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           K+KKEKTG+SLVDV YRR              +I++K  KKPK PSQ  +SRT+EMQELF
Sbjct: 660 KDKKEKTGISLVDVAYRRAKAVKAANKAVDAGRIVKKAVKKPKHPSQATKSRTEEMQELF 719

Query: 455 QSDMSEKKQRR 423
           Q DMSEKKQ+R
Sbjct: 720 QGDMSEKKQKR 730


>XP_002273443.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Vitis vinifera]
          Length = 732

 Score = 79.7 bits (195), Expect = 9e-14
 Identities = 42/71 (59%), Positives = 50/71 (70%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           +NKKEK G+SLV +GYRR              KI RK  KK +RPSQT +SRT+EMQELF
Sbjct: 639 ENKKEKAGISLVGIGYRRAKAVKAVKKAQDAGKIGRKANKKSERPSQTNQSRTEEMQELF 698

Query: 455 QSDMSEKKQRR 423
           QSDMSE+KQ+R
Sbjct: 699 QSDMSERKQKR 709


>CBI19889.3 unnamed protein product, partial [Vitis vinifera]
          Length = 875

 Score = 79.7 bits (195), Expect = 9e-14
 Identities = 42/71 (59%), Positives = 50/71 (70%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           +NKKEK G+SLV +GYRR              KI RK  KK +RPSQT +SRT+EMQELF
Sbjct: 782 ENKKEKAGISLVGIGYRRAKAVKAVKKAQDAGKIGRKANKKSERPSQTNQSRTEEMQELF 841

Query: 455 QSDMSEKKQRR 423
           QSDMSE+KQ+R
Sbjct: 842 QSDMSERKQKR 852


>XP_002306942.1 hypothetical protein POPTR_0005s26280g [Populus trichocarpa]
           EEE93938.1 hypothetical protein POPTR_0005s26280g
           [Populus trichocarpa]
          Length = 744

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEG-KKPKRPSQTLRSRTDEMQEL 459
           KNKKEKTG+SLVD+GYRR              K ++K+G KK K+P +  +SRT+EMQEL
Sbjct: 650 KNKKEKTGLSLVDLGYRRAKAAKAVKKAMDAGKFVQKKGSKKSKQPPERTQSRTEEMQEL 709

Query: 458 FQSDMSEKKQRR 423
           FQSDMSEKKQ+R
Sbjct: 710 FQSDMSEKKQKR 721


>XP_019152959.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Ipomoea nil]
          Length = 744

 Score = 77.8 bits (190), Expect = 4e-13
 Identities = 38/71 (53%), Positives = 52/71 (73%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           K KK+KTG++LVD+ YRR              KI+RKEGKK KRP++  +SRT+EM+ELF
Sbjct: 653 KTKKDKTGITLVDLAYRRAKSVKAAKKAADAGKIIRKEGKKTKRPTKVTQSRTEEMRELF 712

Query: 455 QSDMSEKKQRR 423
           +SDMSE+K++R
Sbjct: 713 KSDMSEEKKKR 723


>XP_015577149.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Ricinus
           communis]
          Length = 753

 Score = 77.8 bits (190), Expect = 4e-13
 Identities = 40/71 (56%), Positives = 50/71 (70%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           K KKEKTG+SLVD+GYRR              KI++K  KK KRPSQ  + RT+EM+ELF
Sbjct: 660 KIKKEKTGISLVDLGYRRAKAAKAVKRAVDAGKIIQKAAKKSKRPSQRTQPRTEEMRELF 719

Query: 455 QSDMSEKKQRR 423
           QSDMSE+KQ++
Sbjct: 720 QSDMSERKQKK 730


>EEF52741.1 dead box ATP-dependent RNA helicase, putative [Ricinus communis]
          Length = 783

 Score = 77.8 bits (190), Expect = 4e-13
 Identities = 40/71 (56%), Positives = 50/71 (70%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           K KKEKTG+SLVD+GYRR              KI++K  KK KRPSQ  + RT+EM+ELF
Sbjct: 677 KIKKEKTGISLVDLGYRRAKAAKAVKRAVDAGKIIQKAAKKSKRPSQRTQPRTEEMRELF 736

Query: 455 QSDMSEKKQRR 423
           QSDMSE+KQ++
Sbjct: 737 QSDMSERKQKK 747


>XP_011045064.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X2
           [Populus euphratica]
          Length = 775

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEG-KKPKRPSQTLRSRTDEMQEL 459
           KNKKEKTG+SLVD+GYRR              KI++K+  KK K+P +  +SRT+EMQEL
Sbjct: 681 KNKKEKTGLSLVDLGYRRAKAAKAVKKAMDAGKIVQKKASKKSKQPPERTQSRTEEMQEL 740

Query: 458 FQSDMSEKKQRR 423
           FQSDMSEKKQ+R
Sbjct: 741 FQSDMSEKKQKR 752


>XP_011045063.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X1
           [Populus euphratica]
          Length = 776

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEG-KKPKRPSQTLRSRTDEMQEL 459
           KNKKEKTG+SLVD+GYRR              KI++K+  KK K+P +  +SRT+EMQEL
Sbjct: 682 KNKKEKTGLSLVDLGYRRAKAAKAVKKAMDAGKIVQKKASKKSKQPPERTQSRTEEMQEL 741

Query: 458 FQSDMSEKKQRR 423
           FQSDMSEKKQ+R
Sbjct: 742 FQSDMSEKKQKR 753


>GAV81604.1 DEAD domain-containing protein/Helicase_C domain-containing protein
           [Cephalotus follicularis]
          Length = 745

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 39/71 (54%), Positives = 49/71 (69%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           KNKKEK+G+SLVD+ YRR              KI+++  KK KRPSQ   SRT+EM+ELF
Sbjct: 652 KNKKEKSGLSLVDLAYRRAKAVKAVKKALDAGKIVKQSSKKTKRPSQNTESRTEEMRELF 711

Query: 455 QSDMSEKKQRR 423
           QS+MSE+KQ R
Sbjct: 712 QSEMSERKQNR 722


>XP_006342065.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Solanum
           tuberosum]
          Length = 745

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 38/71 (53%), Positives = 48/71 (67%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           K KKEK+G+SLVD+ YRR              KI+RK G KPK  S+   SRT+EMQ+LF
Sbjct: 654 KTKKEKSGISLVDLAYRRAKAVKAVNKAVDAGKIVRKAGNKPKPKSRASESRTEEMQDLF 713

Query: 455 QSDMSEKKQRR 423
           Q+DMSE+KQR+
Sbjct: 714 QNDMSERKQRK 724


>XP_002301963.2 hypothetical protein POPTR_0002s02160g [Populus trichocarpa]
           EEE81236.2 hypothetical protein POPTR_0002s02160g
           [Populus trichocarpa]
          Length = 256

 Score = 72.4 bits (176), Expect = 8e-12
 Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKE-GKKPKRPSQTLRSRTDEMQEL 459
           KNKKE TG+SLVD+GYRR              KI++K+ GKK K P +  +SRT+EM+EL
Sbjct: 145 KNKKENTGLSLVDLGYRRVKAAEAVKKALDAGKIVQKKAGKKSKPPPERTQSRTEEMREL 204

Query: 458 FQSDMSEKKQRRI 420
           FQ DMSE+KQ+R+
Sbjct: 205 FQRDMSERKQKRM 217


>OMO75436.1 hypothetical protein COLO4_26129 [Corchorus olitorius]
          Length = 707

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 37/70 (52%), Positives = 49/70 (70%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           KNKKEK G+SLVD+ YRR              KI++K+ KK K+ +Q  +SRT+EM+ELF
Sbjct: 615 KNKKEKEGISLVDLAYRRAKAVKAVKKAVDSGKIMKKQNKKSKQANQRTQSRTEEMRELF 674

Query: 455 QSDMSEKKQR 426
           QSDMSEK+Q+
Sbjct: 675 QSDMSEKRQK 684


>XP_012075065.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Jatropha curcas]
           KDP35421.1 hypothetical protein JCGZ_10804 [Jatropha
           curcas]
          Length = 750

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 39/71 (54%), Positives = 48/71 (67%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           K+K+EK G+SLVD+GYRR              KI++K GKK K PS   +SR  EMQE+F
Sbjct: 657 KSKEEKAGMSLVDLGYRRAKAVKAVKRALDAGKIVQKAGKKSKHPSLRTQSRKAEMQEIF 716

Query: 455 QSDMSEKKQRR 423
           QSDMSEKKQ+R
Sbjct: 717 QSDMSEKKQKR 727


>XP_008361683.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Malus
           domestica]
          Length = 107

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 35/69 (50%), Positives = 44/69 (63%)
 Frame = -1

Query: 629 KKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELFQS 450
           KKEKTG  LVD+ YRR              KI+RK  KK  RP Q  +SRT+EMQ+LFQS
Sbjct: 16  KKEKTGTPLVDLAYRRAKAVKAAKKATDAGKIVRKTSKKSSRPPQKTQSRTEEMQDLFQS 75

Query: 449 DMSEKKQRR 423
           DMS+++Q +
Sbjct: 76  DMSQRRQNK 84


>XP_011083581.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Sesamum indicum]
          Length = 746

 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 38/71 (53%), Positives = 46/71 (64%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           K+K EK G+ LVDV YRR              KI++K  KK K PSQ  +SRT+EMQELF
Sbjct: 655 KSKTEKKGIPLVDVAYRRAKAVKAAKKAVDAGKIVKKSVKKSKHPSQITKSRTEEMQELF 714

Query: 455 QSDMSEKKQRR 423
           Q DMSEK+Q+R
Sbjct: 715 QDDMSEKRQKR 725


>XP_016568360.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Capsicum annuum]
           XP_016568361.1 PREDICTED: DEAD-box ATP-dependent RNA
           helicase 28 [Capsicum annuum]
          Length = 742

 Score = 72.0 bits (175), Expect = 4e-11
 Identities = 37/71 (52%), Positives = 47/71 (66%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           K K+EK G+SLVD+ YRR              KI+RK GKKPK  S+   S T++MQ+LF
Sbjct: 651 KTKREKPGISLVDLAYRRAKAVKAVNKAVNAGKIVRKPGKKPKPKSRVSESMTEQMQDLF 710

Query: 455 QSDMSEKKQRR 423
           Q+DMSEKKQR+
Sbjct: 711 QNDMSEKKQRK 721


>XP_009591539.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Nicotiana
           tomentosiformis] XP_016468244.1 PREDICTED: DEAD-box
           ATP-dependent RNA helicase 28-like [Nicotiana tabacum]
          Length = 740

 Score = 71.6 bits (174), Expect = 5e-11
 Identities = 38/71 (53%), Positives = 47/71 (66%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           K  KEK+G+SLVD+ YRR              KI+RK GKK K  ++   SRTDEMQ+LF
Sbjct: 649 KKDKEKSGISLVDLAYRRAKAVKAVNKAVDAGKIVRKTGKKLKPKTRVSESRTDEMQDLF 708

Query: 455 QSDMSEKKQRR 423
           Q+DMSEKKQR+
Sbjct: 709 QNDMSEKKQRK 719


>XP_004238369.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Solanum
           lycopersicum]
          Length = 744

 Score = 71.6 bits (174), Expect = 5e-11
 Identities = 36/71 (50%), Positives = 48/71 (67%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           K+KKEK+G+SLVD+ YRR              KI+RK G KPK  S+   SRT+EMQ++F
Sbjct: 653 KSKKEKSGISLVDLAYRRAKAVKAVNKAVDAGKIVRKAGNKPKPKSRASESRTEEMQDIF 712

Query: 455 QSDMSEKKQRR 423
           Q+D SE+KQR+
Sbjct: 713 QNDTSERKQRK 723


>XP_015074090.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Solanum
           pennellii]
          Length = 760

 Score = 71.6 bits (174), Expect = 5e-11
 Identities = 36/71 (50%), Positives = 48/71 (67%)
 Frame = -1

Query: 635 KNKKEKTGVSLVDVGYRRXXXXXXXXXXXXXXKILRKEGKKPKRPSQTLRSRTDEMQELF 456
           K+KKEK+G+SLVD+ YRR              KI+RK G KPK  S+   SRT+EMQ++F
Sbjct: 669 KSKKEKSGISLVDLAYRRAKAVKAVNKAVDAGKIVRKAGNKPKPKSRASESRTEEMQDIF 728

Query: 455 QSDMSEKKQRR 423
           Q+D SE+KQR+
Sbjct: 729 QNDASERKQRK 739


Top