BLASTX nr result

ID: Panax25_contig00019485 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00019485
         (699 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CBI36446.3 unnamed protein product, partial [Vitis vinifera]           62   2e-07
XP_002269241.2 PREDICTED: F-box protein At5g07610 [Vitis vinifera]     62   2e-07
XP_008341163.1 PREDICTED: F-box protein At5g07610-like [Malus do...    59   1e-06
XP_009339415.2 PREDICTED: F-box protein At5g07610-like [Pyrus x ...    58   2e-06
XP_009370041.1 PREDICTED: F-box protein At5g07610-like [Pyrus x ...    58   2e-06
XP_010263254.1 PREDICTED: F-box protein At5g07610-like [Nelumbo ...    57   2e-06

>CBI36446.3 unnamed protein product, partial [Vitis vinifera]
          Length = 374

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = -3

Query: 601 YQS*LSKFYVLEMKKDYSKWFVKYNVNLDAMAVKFPEIMP-YHGVYSKAFGFHVLSLVRR 425
           Y+S  ++F V EM++D+S WFVK+ V+L+ +A+ FP I+  YH  Y   + F VL +VRR
Sbjct: 263 YESSTTQFNVYEMERDHSGWFVKFRVDLNGVALAFPGIIEGYHEEYDYMYSFSVLCIVRR 322

Query: 424 ELGERSVLA 398
           E  E S LA
Sbjct: 323 EKEEDSFLA 331


>XP_002269241.2 PREDICTED: F-box protein At5g07610 [Vitis vinifera]
          Length = 386

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = -3

Query: 601 YQS*LSKFYVLEMKKDYSKWFVKYNVNLDAMAVKFPEIMP-YHGVYSKAFGFHVLSLVRR 425
           Y+S  ++F V EM++D+S WFVK+ V+L+ +A+ FP I+  YH  Y   + F VL +VRR
Sbjct: 275 YESSTTQFNVYEMERDHSGWFVKFRVDLNGVALAFPGIIEGYHEEYDYMYSFSVLCIVRR 334

Query: 424 ELGERSVLA 398
           E  E S LA
Sbjct: 335 EKEEDSFLA 343


>XP_008341163.1 PREDICTED: F-box protein At5g07610-like [Malus domestica]
          Length = 325

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
 Frame = -3

Query: 601 YQS*LSKFYVLEMKKDYSKWFVKYNVNLDAMAVKFPEIMPYHGVYSKA-----FGFHVLS 437
           Y+   ++F V+EM +DYS WFVKY+V+LD +  KFPE++P H +   +     + F VL 
Sbjct: 205 YRPCFTQFDVMEMGRDYSGWFVKYHVDLDTITAKFPEMVPQHNLDDPSEENWYYEFVVLF 264

Query: 436 LVRRELGERSVL 401
           LVR E  E + +
Sbjct: 265 LVREENEEETAM 276


>XP_009339415.2 PREDICTED: F-box protein At5g07610-like [Pyrus x bretschneideri]
          Length = 324

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
 Frame = -3

Query: 601 YQS*LSKFYVLEMKKDYSKWFVKYNVNLDAMAVKFPEIMPYHGVYSKA-----FGFHVLS 437
           Y+   ++F V+EM +DYS WFVKY+V+LD +  KFP+++P H +   +     + F VL 
Sbjct: 204 YRPCFTQFDVMEMGRDYSGWFVKYHVDLDTITAKFPKMVPQHNIDDPSEENWYYEFVVLF 263

Query: 436 LVRRELGERSVL 401
           LVR E  E + +
Sbjct: 264 LVREENEEETAM 275


>XP_009370041.1 PREDICTED: F-box protein At5g07610-like [Pyrus x bretschneideri]
          Length = 324

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
 Frame = -3

Query: 601 YQS*LSKFYVLEMKKDYSKWFVKYNVNLDAMAVKFPEIMPYHGVYSKA-----FGFHVLS 437
           Y+   ++F V+EM +DYS WFVKY+V+LD +  KFP+++P H +   +     + F VL 
Sbjct: 204 YRPCFTQFDVMEMGRDYSGWFVKYHVDLDTITAKFPKMVPQHNIDDPSEENWYYEFVVLF 263

Query: 436 LVRRELGERSVL 401
           LVR E  E + +
Sbjct: 264 LVREENEEETAM 275


>XP_010263254.1 PREDICTED: F-box protein At5g07610-like [Nelumbo nucifera]
          Length = 451

 Score = 57.0 bits (136), Expect(2) = 2e-06
 Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
 Frame = -3

Query: 586 SKFYVLEMKKDYSKWFVKYNVNLDAMAVKFPEIMPY---HGVYSKAF-------GFHVLS 437
           + F VLEM+KDYS WFVKY V+LDA+  +FPEI+P+   H + ++ F        + VL+
Sbjct: 322 TSFAVLEMEKDYSGWFVKYQVDLDALIYEFPEILPFAPGHQIDTRFFPIPVPFYQYSVLN 381

Query: 436 LVRRELGE 413
           L+R   GE
Sbjct: 382 LIRGGGGE 389



 Score = 22.7 bits (47), Expect(2) = 2e-06
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 656 PMPSLHGNAKRRNIIYFGVSE 594
           P+P L     RR  +YFG S+
Sbjct: 282 PLPQLTQALNRRGYLYFGESQ 302


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