BLASTX nr result

ID: Panax25_contig00019425 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00019425
         (377 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017227356.1 PREDICTED: translocase of chloroplast 159, chloro...    67   1e-10
XP_017235013.1 PREDICTED: translocase of chloroplast 159, chloro...    66   5e-10
XP_017235012.1 PREDICTED: translocase of chloroplast 159, chloro...    66   5e-10
KZN04966.1 hypothetical protein DCAR_005803 [Daucus carota subsp...    66   5e-10
XP_018499723.1 PREDICTED: translocase of chloroplast 159, chloro...    57   6e-07
XP_008368991.1 PREDICTED: translocase of chloroplast 159, chloro...    54   7e-06

>XP_017227356.1 PREDICTED: translocase of chloroplast 159, chloroplastic-like
           [Daucus carota subsp. sativus] KZN10164.1 hypothetical
           protein DCAR_002820 [Daucus carota subsp. sativus]
          Length = 1430

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
 Frame = -2

Query: 361 SVSVGTLDGGFEKDKVIEFSQLSEGLSSVVKDSSIPEGEVEEVKLKDEEGLENIKIEALE 182
           +V VG L+ G ++DKVIE +                    EE+KL+ E        E L 
Sbjct: 139 NVEVGVLEEGLKEDKVIEVA------------------GAEEIKLEGE--------EVLL 172

Query: 181 DENAADGIEA--KVVNELIEEHAVESDNTQQVSAQIVEAADGVKVTSEGDSVVEAVHVEL 8
           DE   +G     + V+E++E+H VES  +++VS  +VE  +GV+VT EGD+VVE ++V+L
Sbjct: 173 DEKKIEGYNGGEEGVSEVVEKHVVESSGSEEVSVGVVEPMEGVEVTREGDAVVETINVDL 232


>XP_017235013.1 PREDICTED: translocase of chloroplast 159, chloroplastic-like
           isoform X2 [Daucus carota subsp. sativus]
          Length = 1400

 Score = 65.9 bits (159), Expect = 5e-10
 Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 26/137 (18%)
 Frame = -2

Query: 340 DGGFEKDKVIEFSQ-LSEGLSSVV----------KDSSIPEGE--------------VEE 236
           +GG  +DKV EFS+ L   L+ VV          KD  +  GE              VEE
Sbjct: 123 EGGLREDKVTEFSEGLGSDLNGVVEKNGGVGKSFKDVVVEGGEGLTGNVDVGAEGGFVEE 182

Query: 235 VKLKDEEGL-ENIKIEALEDENAADGIEAKVVNELIEEHAVESDNTQQVSAQIVEAADGV 59
                 EGL   ++  +LE E   +  + + V++++E+H VES  ++QV   +VE+  GV
Sbjct: 183 EVRGFTEGLGSGVEENSLESEEVLEVKKMEGVSQVVEKHVVESSESEQVGDVVVESGSGV 242

Query: 58  KVTSEGDSVVEAVHVEL 8
           +VT EGD+VVE ++V+L
Sbjct: 243 EVTREGDTVVETINVDL 259


>XP_017235012.1 PREDICTED: translocase of chloroplast 159, chloroplastic-like
           isoform X1 [Daucus carota subsp. sativus]
          Length = 1478

 Score = 65.9 bits (159), Expect = 5e-10
 Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 26/137 (18%)
 Frame = -2

Query: 340 DGGFEKDKVIEFSQ-LSEGLSSVV----------KDSSIPEGE--------------VEE 236
           +GG  +DKV EFS+ L   L+ VV          KD  +  GE              VEE
Sbjct: 201 EGGLREDKVTEFSEGLGSDLNGVVEKNGGVGKSFKDVVVEGGEGLTGNVDVGAEGGFVEE 260

Query: 235 VKLKDEEGL-ENIKIEALEDENAADGIEAKVVNELIEEHAVESDNTQQVSAQIVEAADGV 59
                 EGL   ++  +LE E   +  + + V++++E+H VES  ++QV   +VE+  GV
Sbjct: 261 EVRGFTEGLGSGVEENSLESEEVLEVKKMEGVSQVVEKHVVESSESEQVGDVVVESGSGV 320

Query: 58  KVTSEGDSVVEAVHVEL 8
           +VT EGD+VVE ++V+L
Sbjct: 321 EVTREGDTVVETINVDL 337


>KZN04966.1 hypothetical protein DCAR_005803 [Daucus carota subsp. sativus]
          Length = 1492

 Score = 65.9 bits (159), Expect = 5e-10
 Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 26/137 (18%)
 Frame = -2

Query: 340 DGGFEKDKVIEFSQ-LSEGLSSVV----------KDSSIPEGE--------------VEE 236
           +GG  +DKV EFS+ L   L+ VV          KD  +  GE              VEE
Sbjct: 201 EGGLREDKVTEFSEGLGSDLNGVVEKNGGVGKSFKDVVVEGGEGLTGNVDVGAEGGFVEE 260

Query: 235 VKLKDEEGL-ENIKIEALEDENAADGIEAKVVNELIEEHAVESDNTQQVSAQIVEAADGV 59
                 EGL   ++  +LE E   +  + + V++++E+H VES  ++QV   +VE+  GV
Sbjct: 261 EVRGFTEGLGSGVEENSLESEEVLEVKKMEGVSQVVEKHVVESSESEQVGDVVVESGSGV 320

Query: 58  KVTSEGDSVVEAVHVEL 8
           +VT EGD+VVE ++V+L
Sbjct: 321 EVTREGDTVVETINVDL 337


>XP_018499723.1 PREDICTED: translocase of chloroplast 159, chloroplastic-like
           isoform X1 [Pyrus x bretschneideri] XP_018499725.1
           PREDICTED: translocase of chloroplast 159,
           chloroplastic-like isoform X1 [Pyrus x bretschneideri]
          Length = 1374

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 42/123 (34%), Positives = 67/123 (54%)
 Frame = -2

Query: 376 EPVKESVSVGTLDGGFEKDKVIEFSQLSEGLSSVVKDSSIPEGEVEEVKLKDEEGLENIK 197
           E + E V    + GG E+D V+E  +L EGL SVV++  + E  VE  ++ D++ +E  K
Sbjct: 162 ENLGEMVKENGVSGG-EEDTVVENLKLVEGLGSVVEEIPVVEKPVEVAEVDDKKAVEQPK 220

Query: 196 IEALEDENAADGIEAKVVNELIEEHAVESDNTQQVSAQIVEAADGVKVTSEGDSVVEAVH 17
                +E+  +G E +VV E  E   V      +   ++ E  +GV++TS GDSVV+ +H
Sbjct: 221 -----EEHVFNG-EREVVRESKENGVVVDGPADEKLVEVEE--NGVEITSGGDSVVQDIH 272

Query: 16  VEL 8
             L
Sbjct: 273 ANL 275


>XP_008368991.1 PREDICTED: translocase of chloroplast 159, chloroplastic-like
           [Malus domestica]
          Length = 1480

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 41/109 (37%), Positives = 60/109 (55%)
 Frame = -2

Query: 334 GFEKDKVIEFSQLSEGLSSVVKDSSIPEGEVEEVKLKDEEGLENIKIEALEDENAADGIE 155
           G E+DKV+E S+L EGL SVV      E  VE  ++ D++ +E  K     +E+A +G E
Sbjct: 175 GEEEDKVVENSKLVEGLGSVV------EKPVEVAEVDDKKAVEQPK-----EEHAFNG-E 222

Query: 154 AKVVNELIEEHAVESDNTQQVSAQIVEAADGVKVTSEGDSVVEAVHVEL 8
            +VV E  E   V      +   ++ E  +GV++TS GDSVV  +H  L
Sbjct: 223 TEVVTESKENCVVVDGPADEKLVEVEE--NGVEITSGGDSVVRDIHANL 269


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