BLASTX nr result
ID: Panax25_contig00019272
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00019272
(417 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017225052.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 171 1e-46
XP_017257953.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 171 1e-46
CAN63470.1 hypothetical protein VITISV_024603 [Vitis vinifera] 147 2e-38
XP_002265533.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 147 2e-38
CBI40152.3 unnamed protein product, partial [Vitis vinifera] 147 2e-38
XP_018849434.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 146 5e-38
XP_018849433.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 146 5e-38
XP_011089162.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 145 1e-37
XP_017984847.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 145 1e-37
XP_007010999.2 PREDICTED: DNA-directed RNA polymerase V subunit ... 145 1e-37
EOY19809.1 DNA-directed RNA polymerase E subunit 1, putative iso... 145 1e-37
OMP00131.1 RNA polymerase, alpha subunit [Corchorus capsularis] 144 3e-37
XP_008465860.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 144 3e-37
XP_011655250.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 143 5e-37
CDP18669.1 unnamed protein product [Coffea canephora] 141 3e-36
XP_015876223.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 138 4e-35
XP_012449584.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 137 5e-35
XP_016714729.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 137 5e-35
XP_012449583.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 137 5e-35
XP_017645439.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 137 5e-35
>XP_017225052.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Daucus
carota subsp. sativus]
Length = 1989
Score = 171 bits (432), Expect = 1e-46
Identities = 76/104 (73%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
DHVFNYHPDK KMG GI YVM++KHS+FQDTRCLYIVSTDG KEDFSYRKCLEN++K K
Sbjct: 1654 DHVFNYHPDKAAKMGAGIHYVMISKHSSFQDTRCLYIVSTDGRKEDFSYRKCLENYMKEK 1713
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAA-PEEAATENKPRGW 310
+PDR EAFMAKY KR+ QPRPGWN+ERS +A +NK +GW
Sbjct: 1714 FPDRGEAFMAKYLKRNQQPRPGWNKERSTPDTSNSAVKNKRKGW 1757
>XP_017257953.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Daucus carota
subsp. sativus] KZM90293.1 hypothetical protein
DCAR_022342 [Daucus carota subsp. sativus]
Length = 2116
Score = 171 bits (432), Expect = 1e-46
Identities = 76/104 (73%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
DHVFNYHPDK KMG GI YVM++KHS+FQDTRCLYIVSTDG KEDFSYRKCLEN++K K
Sbjct: 1781 DHVFNYHPDKAAKMGAGIHYVMISKHSSFQDTRCLYIVSTDGRKEDFSYRKCLENYMKEK 1840
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAA-PEEAATENKPRGW 310
+PDR EAFMAKY KR+ QPRPGWN+ERS +A +NK +GW
Sbjct: 1841 FPDRGEAFMAKYLKRNQQPRPGWNKERSTPDTSNSAVKNKRKGW 1884
>CAN63470.1 hypothetical protein VITISV_024603 [Vitis vinifera]
Length = 1081
Score = 147 bits (372), Expect = 2e-38
Identities = 68/99 (68%), Positives = 78/99 (78%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
D VFN HPDK VKMGTGIDYVMV++HS+F ++RC Y+VSTDGHKEDFSYRKCLENFIK K
Sbjct: 973 DKVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEK 1032
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEEAATENK 298
YPD AE F+ KYF+R PR G NRERS PE+ +
Sbjct: 1033 YPDNAETFIGKYFRR---PRAGGNRERSVIPEDGGNREQ 1068
>XP_002265533.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
Length = 1830
Score = 147 bits (372), Expect = 2e-38
Identities = 68/99 (68%), Positives = 78/99 (78%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
D VFN HPDK VKMGTGIDYVMV++HS+F ++RC Y+VSTDGHKEDFSYRKCLENFIK K
Sbjct: 1722 DKVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEK 1781
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEEAATENK 298
YPD AE F+ KYF+R PR G NRERS PE+ +
Sbjct: 1782 YPDNAETFIGKYFRR---PRAGGNRERSVIPEDGGNREQ 1817
>CBI40152.3 unnamed protein product, partial [Vitis vinifera]
Length = 1890
Score = 147 bits (372), Expect = 2e-38
Identities = 68/99 (68%), Positives = 78/99 (78%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
D VFN HPDK VKMGTGIDYVMV++HS+F ++RC Y+VSTDGHKEDFSYRKCLENFIK K
Sbjct: 1782 DKVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEK 1841
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEEAATENK 298
YPD AE F+ KYF+R PR G NRERS PE+ +
Sbjct: 1842 YPDNAETFIGKYFRR---PRAGGNRERSVIPEDGGNREQ 1877
>XP_018849434.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Juglans regia]
Length = 1840
Score = 146 bits (368), Expect = 5e-38
Identities = 66/93 (70%), Positives = 78/93 (83%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
D VFNYHPDK VKMG GID+ MV++HSN+QD+RC Y+VSTDG KEDFSYRKCL+NFIK K
Sbjct: 1743 DSVFNYHPDKAVKMGAGIDHFMVSRHSNYQDSRCFYVVSTDGRKEDFSYRKCLDNFIKSK 1802
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEE 280
YPD AEAF+AKYF++ PR G NRE ++ PEE
Sbjct: 1803 YPDVAEAFLAKYFRK---PRSGGNRESNSVPEE 1832
>XP_018849433.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Juglans regia]
Length = 1932
Score = 146 bits (368), Expect = 5e-38
Identities = 66/93 (70%), Positives = 78/93 (83%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
D VFNYHPDK VKMG GID+ MV++HSN+QD+RC Y+VSTDG KEDFSYRKCL+NFIK K
Sbjct: 1835 DSVFNYHPDKAVKMGAGIDHFMVSRHSNYQDSRCFYVVSTDGRKEDFSYRKCLDNFIKSK 1894
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEE 280
YPD AEAF+AKYF++ PR G NRE ++ PEE
Sbjct: 1895 YPDVAEAFLAKYFRK---PRSGGNRESNSVPEE 1924
>XP_011089162.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Sesamum indicum]
Length = 2096
Score = 145 bits (366), Expect = 1e-37
Identities = 64/92 (69%), Positives = 76/92 (82%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
D+VF+YHPDK +KMG GIDY+MV++H FQD+RC Y VS DG K DFSYRKCLENFIKGK
Sbjct: 1912 DNVFSYHPDKALKMGAGIDYIMVSRHGEFQDSRCFYAVSVDGSKADFSYRKCLENFIKGK 1971
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPE 277
YPD+AEAF+ KYFK+ +QPR GWNR+R E
Sbjct: 1972 YPDKAEAFITKYFKK-SQPRAGWNRDRPPRSE 2002
>XP_017984847.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Theobroma cacao]
Length = 1786
Score = 145 bits (365), Expect = 1e-37
Identities = 65/99 (65%), Positives = 80/99 (80%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
++VF +HPDK +KMG G+DYVMV+KHSNF D+RC Y+VSTDG K+DFSYRKCL+NFIKGK
Sbjct: 1690 ENVFTHHPDKAIKMGAGVDYVMVSKHSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGK 1749
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEEAATENK 298
YPD A+ F+AKYF++ PR G RERS APE EN+
Sbjct: 1750 YPDMADVFIAKYFRK---PRFGGFRERSVAPENTEGENR 1785
>XP_007010999.2 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Theobroma cacao]
Length = 1788
Score = 145 bits (365), Expect = 1e-37
Identities = 65/99 (65%), Positives = 80/99 (80%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
++VF +HPDK +KMG G+DYVMV+KHSNF D+RC Y+VSTDG K+DFSYRKCL+NFIKGK
Sbjct: 1692 ENVFTHHPDKAIKMGAGVDYVMVSKHSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGK 1751
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEEAATENK 298
YPD A+ F+AKYF++ PR G RERS APE EN+
Sbjct: 1752 YPDMADVFIAKYFRK---PRFGGFRERSVAPENTEGENR 1787
>EOY19809.1 DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] EOY19810.1 DNA-directed RNA polymerase
E subunit 1, putative isoform 1 [Theobroma cacao]
Length = 1788
Score = 145 bits (365), Expect = 1e-37
Identities = 65/99 (65%), Positives = 80/99 (80%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
++VF +HPDK +KMG G+DYVMV+KHSNF D+RC Y+VSTDG K+DFSYRKCL+NFIKGK
Sbjct: 1692 ENVFTHHPDKAIKMGAGVDYVMVSKHSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGK 1751
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEEAATENK 298
YPD A+ F+AKYF++ PR G RERS APE EN+
Sbjct: 1752 YPDMADVFIAKYFRK---PRFGGFRERSVAPENTEGENR 1787
>OMP00131.1 RNA polymerase, alpha subunit [Corchorus capsularis]
Length = 1928
Score = 144 bits (363), Expect = 3e-37
Identities = 65/103 (63%), Positives = 83/103 (80%), Gaps = 2/103 (1%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
D++F +HPDK KMG G+DYVM++KH++FQDTRC Y+VSTDG KEDFSYRKCLE+F+KGK
Sbjct: 1813 DNIFTHHPDKAAKMGAGVDYVMISKHTDFQDTRCFYVVSTDGQKEDFSYRKCLESFVKGK 1872
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSA--APEEAATENKPR 304
YP+ A+AF+ KYFK+ RPG NRERSA AP+E ++ R
Sbjct: 1873 YPEMADAFIEKYFKK---TRPGGNRERSASVAPDEGENQHPHR 1912
>XP_008465860.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo]
Length = 1964
Score = 144 bits (362), Expect = 3e-37
Identities = 67/102 (65%), Positives = 82/102 (80%)
Frame = +2
Query: 8 VFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGKYP 187
VFN+HPDK KMG GID+ MV++HS+FQ++RC Y+V+TDGHKEDFSYRKCL+NFIKGKYP
Sbjct: 1853 VFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYP 1912
Query: 188 DRAEAFMAKYFKRHNQPRPGWNRERSAAPEEAATENKPRGWE 313
D AE F+AKYF++ PRP NR+R+ A EE ENK G E
Sbjct: 1913 DMAEMFVAKYFRK---PRPNRNRDRNPASEE--NENKSVGGE 1949
>XP_011655250.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis sativus]
XP_011655251.1 PREDICTED: DNA-directed RNA polymerase V
subunit 1 [Cucumis sativus] KGN51090.1 hypothetical
protein Csa_5G435050 [Cucumis sativus]
Length = 1963
Score = 143 bits (361), Expect = 5e-37
Identities = 67/102 (65%), Positives = 82/102 (80%)
Frame = +2
Query: 8 VFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGKYP 187
VFN+HPDK KMG GID+ MV++HS+FQ++RC Y+V+TDGHKEDFSYRKCL+NFIKGKYP
Sbjct: 1853 VFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYP 1912
Query: 188 DRAEAFMAKYFKRHNQPRPGWNRERSAAPEEAATENKPRGWE 313
D AE F+AKYF++ PRP NR+R+ A EE ENK G E
Sbjct: 1913 DLAEMFVAKYFRK---PRPNRNRDRNPASEE--NENKSIGGE 1949
>CDP18669.1 unnamed protein product [Coffea canephora]
Length = 1946
Score = 141 bits (355), Expect = 3e-36
Identities = 59/99 (59%), Positives = 82/99 (82%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
D+V NYHP+KV+K+G GI Y+MV+KH++FQ++RC Y+VSTD HK+DFSYRK LENF + K
Sbjct: 1848 DNVLNYHPEKVLKIGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRKSLENFARKK 1907
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEEAATENK 298
YPD+A+AF+AKYF R PRPGW+R+ ++ P+EA + +
Sbjct: 1908 YPDKADAFLAKYFSR-KPPRPGWSRDHASTPDEAGSRQE 1945
>XP_015876223.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Ziziphus jujuba]
Length = 1967
Score = 138 bits (347), Expect = 4e-35
Identities = 64/98 (65%), Positives = 79/98 (80%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
D+VFNYHPDK KMG+GID++ +++HS+FQD+RCLYIVSTDG K DFSYRKCLEN IK K
Sbjct: 1826 DNVFNYHPDKATKMGSGIDHLTISRHSSFQDSRCLYIVSTDGRKVDFSYRKCLENLIKTK 1885
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEEAATEN 295
YPD AEAFM+KYF++ PR G NRER+ + + EN
Sbjct: 1886 YPDVAEAFMSKYFRK---PRSGVNRERTPSLVQTPNEN 1920
>XP_012449584.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Gossypium raimondii]
Length = 1921
Score = 137 bits (346), Expect = 5e-35
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
D+V +HPDK VKMG GIDYVMVNKHS F DTRCLY+V+TDGHK+DFSY KCLEN IKGK
Sbjct: 1797 DNVLAHHPDKAVKMGAGIDYVMVNKHSLFLDTRCLYVVTTDGHKQDFSYLKCLENMIKGK 1856
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEEA 283
YPD AEAF+AKYF++ NRER APE +
Sbjct: 1857 YPDLAEAFVAKYFRKSR-----GNRERGVAPENS 1885
>XP_016714729.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Gossypium
hirsutum]
Length = 1957
Score = 137 bits (346), Expect = 5e-35
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
D+V +HPDK VKMG GIDYVMVNKHS F DTRCLY+V+TDGHK+DFSY KCLEN IKGK
Sbjct: 1836 DNVLAHHPDKAVKMGAGIDYVMVNKHSLFLDTRCLYVVTTDGHKQDFSYLKCLENMIKGK 1895
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEEA 283
YPD AEAF+AKYF++ NRER APE +
Sbjct: 1896 YPDLAEAFVAKYFRKSR-----GNRERGVAPENS 1924
>XP_012449583.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Gossypium raimondii] KJB67887.1 hypothetical protein
B456_010G216600 [Gossypium raimondii]
Length = 1966
Score = 137 bits (346), Expect = 5e-35
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
D+V +HPDK VKMG GIDYVMVNKHS F DTRCLY+V+TDGHK+DFSY KCLEN IKGK
Sbjct: 1842 DNVLAHHPDKAVKMGAGIDYVMVNKHSLFLDTRCLYVVTTDGHKQDFSYLKCLENMIKGK 1901
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEEA 283
YPD AEAF+AKYF++ NRER APE +
Sbjct: 1902 YPDLAEAFVAKYFRKSR-----GNRERGVAPENS 1930
>XP_017645439.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Gossypium
arboreum]
Length = 1969
Score = 137 bits (346), Expect = 5e-35
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +2
Query: 2 DHVFNYHPDKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGHKEDFSYRKCLENFIKGK 181
D+V +HPDK VKMG GIDYVMVNKHS F DTRCLY+V+TDGHK+DFSY KCLEN IKGK
Sbjct: 1848 DNVLAHHPDKAVKMGAGIDYVMVNKHSLFLDTRCLYVVTTDGHKQDFSYLKCLENMIKGK 1907
Query: 182 YPDRAEAFMAKYFKRHNQPRPGWNRERSAAPEEA 283
YPD AEAF+AKYF++ NRER APE +
Sbjct: 1908 YPDLAEAFVAKYFRKSR-----GNRERGVAPENS 1936