BLASTX nr result
ID: Panax25_contig00019251
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00019251
(1287 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZN09272.1 hypothetical protein DCAR_001928 [Daucus carota subsp... 73 7e-14
XP_017229614.1 PREDICTED: 5'-3' exoribonuclease 4 [Daucus carota... 73 7e-14
XP_010674889.1 PREDICTED: 5'-3' exoribonuclease 4 isoform X1 [Be... 65 5e-13
XP_010674890.1 PREDICTED: 5'-3' exoribonuclease 4 isoform X2 [Be... 65 5e-13
KVI08567.1 5'-3' exoribonuclease [Cynara cardunculus var. scolymus] 62 1e-10
XP_008218188.1 PREDICTED: 5'-3' exoribonuclease 4 [Prunus mume] 57 1e-08
XP_019197625.1 PREDICTED: 5'-3' exoribonuclease 4 [Ipomoea nil] 55 2e-08
XP_006433057.1 hypothetical protein CICLE_v10000168mg [Citrus cl... 55 2e-08
XP_006433056.1 hypothetical protein CICLE_v10000168mg [Citrus cl... 55 2e-08
XP_007208373.1 hypothetical protein PRUPE_ppa000881mg [Prunus pe... 56 2e-08
ONI04768.1 hypothetical protein PRUPE_6G338500 [Prunus persica] 56 2e-08
XP_015875491.1 PREDICTED: 5'-3' exoribonuclease 4 [Ziziphus jujuba] 57 3e-08
KNA09594.1 hypothetical protein SOVF_152220 [Spinacia oleracea] 67 3e-08
XP_008370675.1 PREDICTED: 5'-3' exoribonuclease 4-like [Malus do... 52 1e-07
XP_018824933.1 PREDICTED: 5'-3' exoribonuclease 4-like [Juglans ... 53 2e-07
XP_011003775.1 PREDICTED: 5'-3' exoribonuclease 4-like isoform X... 50 2e-07
XP_009765212.1 PREDICTED: 5'-3' exoribonuclease 4 [Nicotiana syl... 57 2e-07
XP_011003776.1 PREDICTED: 5'-3' exoribonuclease 4-like isoform X... 50 2e-07
XP_016488688.1 PREDICTED: 5'-3' exoribonuclease 4-like, partial ... 57 2e-07
XP_011032477.1 PREDICTED: 5'-3' exoribonuclease 4 [Populus euphr... 53 2e-07
>KZN09272.1 hypothetical protein DCAR_001928 [Daucus carota subsp. sativus]
Length = 1052
Score = 72.8 bits (177), Expect(2) = 7e-14
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPWP 1085
+ E+E +RNRV+YDLLYVNP HAL+P I+SYYNF Q+P +QR PWP
Sbjct: 709 LTEEEHMRNRVMYDLLYVNPYHALSPYIVSYYNFVNQMPVNQRVPWP 755
Score = 33.9 bits (76), Expect(2) = 7e-14
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN RIV+ SP+ GLPDI +N VL
Sbjct: 773 RNGFRIVVTSPVRGLPDINDNHVL 796
>XP_017229614.1 PREDICTED: 5'-3' exoribonuclease 4 [Daucus carota subsp. sativus]
Length = 940
Score = 72.8 bits (177), Expect(2) = 7e-14
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPWP 1085
+ E+E +RNRV+YDLLYVNP HAL+P I+SYYNF Q+P +QR PWP
Sbjct: 597 LTEEEHMRNRVMYDLLYVNPYHALSPYIVSYYNFVNQMPVNQRVPWP 643
Score = 33.9 bits (76), Expect(2) = 7e-14
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN RIV+ SP+ GLPDI +N VL
Sbjct: 661 RNGFRIVVTSPVRGLPDINDNHVL 684
>XP_010674889.1 PREDICTED: 5'-3' exoribonuclease 4 isoform X1 [Beta vulgaris subsp.
vulgaris] KMT13460.1 hypothetical protein BVRB_4g082390
[Beta vulgaris subsp. vulgaris]
Length = 930
Score = 65.5 bits (158), Expect(2) = 5e-13
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = +3
Query: 954 KEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPWP 1085
+EQ RN V++D+LYV+P+H + I+SYY+F+YQ PP+QRY WP
Sbjct: 600 EEQHRNTVMFDMLYVHPAHPMGSQIVSYYHFYYQTPPNQRYAWP 643
Score = 38.5 bits (88), Expect(2) = 5e-13
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 13/63 (20%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL*V-------------PPSAIN*CKILMKFSAFWPFK 1230
RN R V+PSP+ GLPDITNN L V PP +N ++K++ PF
Sbjct: 661 RNGWRQVVPSPVYGLPDITNNLALNVTYLNPLPHKHISEPPKGVNMPAKVVKYTDVKPFP 720
Query: 1231 VMF 1239
++
Sbjct: 721 ALW 723
>XP_010674890.1 PREDICTED: 5'-3' exoribonuclease 4 isoform X2 [Beta vulgaris subsp.
vulgaris]
Length = 768
Score = 65.5 bits (158), Expect(2) = 5e-13
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = +3
Query: 954 KEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPWP 1085
+EQ RN V++D+LYV+P+H + I+SYY+F+YQ PP+QRY WP
Sbjct: 438 EEQHRNTVMFDMLYVHPAHPMGSQIVSYYHFYYQTPPNQRYAWP 481
Score = 38.5 bits (88), Expect(2) = 5e-13
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 13/63 (20%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL*V-------------PPSAIN*CKILMKFSAFWPFK 1230
RN R V+PSP+ GLPDITNN L V PP +N ++K++ PF
Sbjct: 499 RNGWRQVVPSPVYGLPDITNNLALNVTYLNPLPHKHISEPPKGVNMPAKVVKYTDVKPFP 558
Query: 1231 VMF 1239
++
Sbjct: 559 ALW 561
>KVI08567.1 5'-3' exoribonuclease [Cynara cardunculus var. scolymus]
Length = 1030
Score = 62.4 bits (150), Expect(2) = 1e-10
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +3
Query: 948 QEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPWP 1085
Q +EQ RNRV+ DLLYV+P + LAP I +YYNFF Q+ P QR WP
Sbjct: 694 QFEEQARNRVLCDLLYVSPRNRLAPQIFAYYNFFNQMHPSQRSAWP 739
Score = 33.5 bits (75), Expect(2) = 1e-10
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN R+V+PSPISGL D+ N+VL
Sbjct: 757 RNGCRLVLPSPISGLGDLMENRVL 780
>XP_008218188.1 PREDICTED: 5'-3' exoribonuclease 4 [Prunus mume]
Length = 972
Score = 57.4 bits (137), Expect(2) = 1e-08
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPW 1082
+ E+EQ RN V+ DLLYV PSH LA I YY +YQ PP +R+ W
Sbjct: 599 LTEEEQARNSVMLDLLYVYPSHPLAAQINLYYQLYYQSPPHERFAW 644
Score = 32.0 bits (71), Expect(2) = 1e-08
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN R VIPSP+ G P+I NQVL
Sbjct: 663 RNGVRYVIPSPVRGYPNIDYNQVL 686
>XP_019197625.1 PREDICTED: 5'-3' exoribonuclease 4 [Ipomoea nil]
Length = 997
Score = 54.7 bits (130), Expect(2) = 2e-08
Identities = 22/46 (47%), Positives = 34/46 (73%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPW 1082
+ ++EQ+RN +++DLLYV+P HALAP IL+Y+ PP ++ PW
Sbjct: 603 LTQEEQLRNSMMFDLLYVHPIHALAPYILAYFRHNGSTPPKEQVPW 648
Score = 33.9 bits (76), Expect(2) = 2e-08
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN R V+PSPI GL DI NN++L
Sbjct: 667 RNGLRNVVPSPIHGLDDIVNNKIL 690
>XP_006433057.1 hypothetical protein CICLE_v10000168mg [Citrus clementina]
XP_006471738.1 PREDICTED: 5'-3' exoribonuclease 4 [Citrus
sinensis] ESR46297.1 hypothetical protein
CICLE_v10000168mg [Citrus clementina]
Length = 959
Score = 54.7 bits (130), Expect(2) = 2e-08
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPW 1082
+ E+E RN V+ DLLYV+P HAL I+ YY ++Q+PP R+ W
Sbjct: 605 LTEEELFRNSVMLDLLYVHPQHALYQQIILYYQLYHQLPPQDRFAW 650
Score = 33.9 bits (76), Expect(2) = 2e-08
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN R +IPSP+ GLPDI NQ +
Sbjct: 669 RNGFRSIIPSPVKGLPDIERNQAI 692
>XP_006433056.1 hypothetical protein CICLE_v10000168mg [Citrus clementina] ESR46296.1
hypothetical protein CICLE_v10000168mg [Citrus
clementina]
Length = 750
Score = 54.7 bits (130), Expect(2) = 2e-08
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPW 1082
+ E+E RN V+ DLLYV+P HAL I+ YY ++Q+PP R+ W
Sbjct: 396 LTEEELFRNSVMLDLLYVHPQHALYQQIILYYQLYHQLPPQDRFAW 441
Score = 33.9 bits (76), Expect(2) = 2e-08
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN R +IPSP+ GLPDI NQ +
Sbjct: 460 RNGFRSIIPSPVKGLPDIERNQAI 483
>XP_007208373.1 hypothetical protein PRUPE_ppa000881mg [Prunus persica] ONI04767.1
hypothetical protein PRUPE_6G338500 [Prunus persica]
Length = 972
Score = 56.2 bits (134), Expect(2) = 2e-08
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPWP 1085
+ E+EQ RN V+ DLLYV PSH LA + YY +YQ P +R+ WP
Sbjct: 599 LTEEEQARNSVMLDLLYVYPSHPLAAEMKLYYQLYYQSAPQERFVWP 645
Score = 32.0 bits (71), Expect(2) = 2e-08
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN R VIPSP+ G P+I NQVL
Sbjct: 663 RNGVRCVIPSPVRGYPNIDYNQVL 686
>ONI04768.1 hypothetical protein PRUPE_6G338500 [Prunus persica]
Length = 831
Score = 56.2 bits (134), Expect(2) = 2e-08
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPWP 1085
+ E+EQ RN V+ DLLYV PSH LA + YY +YQ P +R+ WP
Sbjct: 458 LTEEEQARNSVMLDLLYVYPSHPLAAEMKLYYQLYYQSAPQERFVWP 504
Score = 32.0 bits (71), Expect(2) = 2e-08
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN R VIPSP+ G P+I NQVL
Sbjct: 522 RNGVRCVIPSPVRGYPNIDYNQVL 545
>XP_015875491.1 PREDICTED: 5'-3' exoribonuclease 4 [Ziziphus jujuba]
Length = 957
Score = 57.4 bits (137), Expect(2) = 3e-08
Identities = 26/46 (56%), Positives = 31/46 (67%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPW 1082
+ E+EQ RN V+ DLLYVNP+H LAP I YY+ YQ P RY W
Sbjct: 599 LTEEEQFRNSVMLDLLYVNPAHPLAPQINLYYSLCYQTPLHARYAW 644
Score = 30.4 bits (67), Expect(2) = 3e-08
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN R VIPSP+ GL +I NQVL
Sbjct: 663 RNGMRHVIPSPVGGLQNIEWNQVL 686
>KNA09594.1 hypothetical protein SOVF_152220 [Spinacia oleracea]
Length = 929
Score = 67.0 bits (162), Expect = 3e-08
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +3
Query: 957 EQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPWPXXE*KENCNSFPH*WTT 1136
EQ RN V++D+LYV+P+H LA ++ YY F+YQ+PPDQRY WP +C + W +
Sbjct: 602 EQRRNCVMFDMLYVHPAHPLASQVVPYYQFYYQMPPDQRYAWPIDS-NASCGMNGYLWIS 660
Query: 1137 RHYK*PSFVSSP 1172
V SP
Sbjct: 661 ERNGWRQVVPSP 672
>XP_008370675.1 PREDICTED: 5'-3' exoribonuclease 4-like [Malus domestica]
Length = 962
Score = 52.4 bits (124), Expect(2) = 1e-07
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +3
Query: 927 REPKLCMQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPW 1082
R+ + + E+EQ RN + DLLYV PSH LA I YY FYQ P +R+ W
Sbjct: 592 RKLESTLTEEEQARNSXMLDLLYVYPSHPLAAQISMYYQQFYQTPLHERFLW 643
Score = 33.5 bits (75), Expect(2) = 1e-07
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN R VIPSPI G PD+ NQVL
Sbjct: 662 RNGLRYVIPSPIRGYPDLDCNQVL 685
>XP_018824933.1 PREDICTED: 5'-3' exoribonuclease 4-like [Juglans regia]
Length = 992
Score = 53.1 bits (126), Expect(2) = 2e-07
Identities = 20/49 (40%), Positives = 36/49 (73%)
Frame = +3
Query: 936 KLCMQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPW 1082
++ + E+E+VRN V++DLLYV+P+H LA I+ YY +++ P +++ W
Sbjct: 594 EVTLSEEEKVRNSVMHDLLYVHPAHRLASQIIQYYRVCFRLHPHEKFVW 642
Score = 32.0 bits (71), Expect(2) = 2e-07
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN + V+PSP++GL D+ NN+V+
Sbjct: 661 RNNIKNVVPSPVNGLQDLDNNRVI 684
>XP_011003775.1 PREDICTED: 5'-3' exoribonuclease 4-like isoform X1 [Populus
euphratica]
Length = 987
Score = 50.1 bits (118), Expect(2) = 2e-07
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPW 1082
+ E+EQ+RNRV++DLLY++P H LA ++SYY + +R+ W
Sbjct: 602 LTEEEQIRNRVMHDLLYIHPVHPLAQQVISYYQQNDHLSVGERFAW 647
Score = 35.0 bits (79), Expect(2) = 2e-07
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN RR V+PSPI GLP + NQVL
Sbjct: 666 RNVRRSVVPSPILGLPALEGNQVL 689
>XP_009765212.1 PREDICTED: 5'-3' exoribonuclease 4 [Nicotiana sylvestris]
XP_009765213.1 PREDICTED: 5'-3' exoribonuclease 4
[Nicotiana sylvestris]
Length = 982
Score = 57.0 bits (136), Expect(2) = 2e-07
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPW 1082
+ E+EQ+RN V++DLLYV+ H LAP I+SYY+ ++PP ++ PW
Sbjct: 598 LSEEEQLRNSVMFDLLYVHHHHTLAPYIISYYHHNNKVPPGEQRPW 643
Score = 28.1 bits (61), Expect(2) = 2e-07
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 13/63 (20%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL*V-------------PPSAIN*CKILMKFSAFWPFK 1230
RN R + SP++GL DI+NN++L + PP + K +++ PF
Sbjct: 662 RNGLRDRVCSPLNGLEDISNNKILNITFLNPVLHKHIPKPPEGVYMPKKILRAVDIKPFP 721
Query: 1231 VMF 1239
V++
Sbjct: 722 VLW 724
>XP_011003776.1 PREDICTED: 5'-3' exoribonuclease 4-like isoform X2 [Populus
euphratica] XP_011003778.1 PREDICTED: 5'-3'
exoribonuclease 4-like isoform X3 [Populus euphratica]
XP_011003779.1 PREDICTED: 5'-3' exoribonuclease 4-like
isoform X4 [Populus euphratica]
Length = 965
Score = 50.1 bits (118), Expect(2) = 2e-07
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPW 1082
+ E+EQ+RNRV++DLLY++P H LA ++SYY + +R+ W
Sbjct: 602 LTEEEQIRNRVMHDLLYIHPVHPLAQQVISYYQQNDHLSVGERFAW 647
Score = 35.0 bits (79), Expect(2) = 2e-07
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN RR V+PSPI GLP + NQVL
Sbjct: 666 RNVRRSVVPSPILGLPALEGNQVL 689
>XP_016488688.1 PREDICTED: 5'-3' exoribonuclease 4-like, partial [Nicotiana tabacum]
Length = 949
Score = 57.0 bits (136), Expect(2) = 2e-07
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYPW 1082
+ E+EQ+RN V++DLLYV+ H LAP I+SYY+ ++PP ++ PW
Sbjct: 565 LSEEEQLRNSVMFDLLYVHHHHTLAPYIISYYHHNNKVPPGEQRPW 610
Score = 28.1 bits (61), Expect(2) = 2e-07
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 13/63 (20%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL*V-------------PPSAIN*CKILMKFSAFWPFK 1230
RN R + SP++GL DI+NN++L + PP + K +++ PF
Sbjct: 629 RNGLRDRVCSPLNGLEDISNNKILNITFLNPVLHKHIPKPPEGVYMPKKILRAVDIKPFP 688
Query: 1231 VMF 1239
V++
Sbjct: 689 VLW 691
>XP_011032477.1 PREDICTED: 5'-3' exoribonuclease 4 [Populus euphratica]
Length = 948
Score = 52.8 bits (125), Expect(2) = 2e-07
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +3
Query: 945 MQEKEQVRNRVIYDLLYVNPSHALAPTILSYYNFFYQIPPDQRYP 1079
+ E+EQVRN V+ DLLYV+P H L+ ++SYY+ Y++P +R P
Sbjct: 602 LMEEEQVRNSVMLDLLYVHPVHPLSQQVISYYHHNYRLPVSERIP 646
Score = 32.3 bits (72), Expect(2) = 2e-07
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 1090 RNERRIVIPSPISGLPDITNNQVL 1161
RN R V+PSPI+GLP + NQVL
Sbjct: 666 RNVWRSVVPSPINGLPALEYNQVL 689