BLASTX nr result
ID: Panax25_contig00019241
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00019241
(390 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BAT09137.1 Os09g0534800, partial [Oryza sativa Japonica Group] 54 1e-06
ONM23119.1 Transcription initiation factor IIB-2 [Zea mays] 54 1e-06
ACF84713.1 unknown [Zea mays] 54 5e-06
EMT25381.1 Transcription initiation factor IIB [Aegilops tauschii] 54 5e-06
AAP80618.1 transcription factor TFIIB, partial [Triticum aestivum] 52 6e-06
XP_010935048.1 PREDICTED: transcription initiation factor IIB [E... 54 7e-06
XP_009409174.1 PREDICTED: transcription initiation factor IIB-li... 54 7e-06
XP_008799413.1 PREDICTED: transcription initiation factor IIB-li... 54 7e-06
XP_008788640.1 PREDICTED: transcription initiation factor IIB-li... 54 7e-06
XP_006660890.1 PREDICTED: transcription initiation factor IIB [O... 54 7e-06
XP_015651154.1 PREDICTED: transcription initiation factor IIB [O... 54 7e-06
XP_020187100.1 transcription initiation factor IIB [Aegilops tau... 54 9e-06
OEL24987.1 Transcription initiation factor IIB [Dichanthelium ol... 54 9e-06
XP_009409510.1 PREDICTED: transcription initiation factor IIB [M... 54 9e-06
NP_001149721.1 transcription initiation factor IIB [Zea mays] AC... 54 9e-06
ACF81664.1 unknown [Zea mays] ONM56801.1 Transcription initiatio... 54 9e-06
XP_004957467.1 PREDICTED: transcription initiation factor IIB [S... 54 9e-06
XP_003578512.1 PREDICTED: transcription initiation factor IIB [B... 54 9e-06
BAK05040.1 predicted protein [Hordeum vulgare subsp. vulgare] 54 9e-06
XP_002460572.1 hypothetical protein SORBIDRAFT_02g031020 [Sorghu... 54 9e-06
>BAT09137.1 Os09g0534800, partial [Oryza sativa Japonica Group]
Length = 123
Score = 53.9 bits (128), Expect = 1e-06
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS+DKKPLK +L G NSY+ L+ Y
Sbjct: 54 RRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPY 102
>ONM23119.1 Transcription initiation factor IIB-2 [Zea mays]
Length = 115
Score = 53.5 bits (127), Expect = 1e-06
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS DKKPLK +L G NSY+ L+ Y
Sbjct: 46 RRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPY 94
>ACF84713.1 unknown [Zea mays]
Length = 198
Score = 53.5 bits (127), Expect = 5e-06
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS DKKPLK +L G NSY+ L+ Y
Sbjct: 129 RRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPY 177
>EMT25381.1 Transcription initiation factor IIB [Aegilops tauschii]
Length = 198
Score = 53.5 bits (127), Expect = 5e-06
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS DKKPLK +L G NSY+ L+ Y
Sbjct: 129 RRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPY 177
>AAP80618.1 transcription factor TFIIB, partial [Triticum aestivum]
Length = 111
Score = 51.6 bits (122), Expect = 6e-06
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKGNL 118
RRSPISIAAAVIY++TQLS DKKPLKG L
Sbjct: 21 RRSPISIAAAVIYMITQLSEDKKPLKGYL 49
>XP_010935048.1 PREDICTED: transcription initiation factor IIB [Elaeis guineensis]
Length = 312
Score = 53.9 bits (128), Expect = 7e-06
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS+DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPY 291
>XP_009409174.1 PREDICTED: transcription initiation factor IIB-like [Musa acuminata
subsp. malaccensis]
Length = 312
Score = 53.9 bits (128), Expect = 7e-06
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS+DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIKNSYKDLYPY 291
>XP_008799413.1 PREDICTED: transcription initiation factor IIB-like [Phoenix
dactylifera]
Length = 312
Score = 53.9 bits (128), Expect = 7e-06
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS+DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPY 291
>XP_008788640.1 PREDICTED: transcription initiation factor IIB-like [Phoenix
dactylifera]
Length = 312
Score = 53.9 bits (128), Expect = 7e-06
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS+DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPY 291
>XP_006660890.1 PREDICTED: transcription initiation factor IIB [Oryza brachyantha]
Length = 312
Score = 53.9 bits (128), Expect = 7e-06
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS+DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPY 291
>XP_015651154.1 PREDICTED: transcription initiation factor IIB [Oryza sativa
Japonica Group] Q8W0W3.1 RecName: Full=Transcription
initiation factor IIB; AltName: Full=General
transcription factor TFIIB AAL73491.1 general
transcription factor TFIIB [Oryza sativa] BAD33339.1
Transcription initiation factor IIB [Oryza sativa
Japonica Group] BAD34211.1 Transcription initiation
factor IIB [Oryza sativa Japonica Group] BAF25689.1
Os09g0534800 [Oryza sativa Japonica Group] EAZ09877.1
hypothetical protein OsI_32170 [Oryza sativa Indica
Group] EAZ45480.1 hypothetical protein OsJ_30135 [Oryza
sativa Japonica Group] AEP20532.1 transcription factor
[Oryza sativa Japonica Group] BAT09136.1 Os09g0534800
[Oryza sativa Japonica Group]
Length = 312
Score = 53.9 bits (128), Expect = 7e-06
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS+DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPY 291
>XP_020187100.1 transcription initiation factor IIB [Aegilops tauschii subsp.
tauschii]
Length = 312
Score = 53.5 bits (127), Expect = 9e-06
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPY 291
>OEL24987.1 Transcription initiation factor IIB [Dichanthelium oligosanthes]
Length = 312
Score = 53.5 bits (127), Expect = 9e-06
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPY 291
>XP_009409510.1 PREDICTED: transcription initiation factor IIB [Musa acuminata
subsp. malaccensis]
Length = 312
Score = 53.5 bits (127), Expect = 9e-06
Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAA+IY++TQLS+DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAIIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPY 291
>NP_001149721.1 transcription initiation factor IIB [Zea mays] ACG36522.1
transcription initiation factor IIB [Zea mays]
ONM23118.1 Transcription initiation factor IIB-2 [Zea
mays] ONM23120.1 Transcription initiation factor IIB-2
[Zea mays] ONM23122.1 Transcription initiation factor
IIB-2 [Zea mays] ONM23123.1 Transcription initiation
factor IIB-2 [Zea mays] ONM23126.1 Transcription
initiation factor IIB-2 [Zea mays] ONM23128.1
Transcription initiation factor IIB-2 [Zea mays]
ONM23129.1 Transcription initiation factor IIB-2 [Zea
mays]
Length = 312
Score = 53.5 bits (127), Expect = 9e-06
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPY 291
>ACF81664.1 unknown [Zea mays] ONM56801.1 Transcription initiation factor IIB-2
[Zea mays] ONM56804.1 Transcription initiation factor
IIB-2 [Zea mays] ONM56806.1 Transcription initiation
factor IIB-2 [Zea mays] ONM56808.1 Transcription
initiation factor IIB-2 [Zea mays] ONM56809.1
Transcription initiation factor IIB-2 [Zea mays]
ONM56812.1 Transcription initiation factor IIB-2 [Zea
mays]
Length = 312
Score = 53.5 bits (127), Expect = 9e-06
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPY 291
>XP_004957467.1 PREDICTED: transcription initiation factor IIB [Setaria italica]
KQL25465.1 hypothetical protein SETIT_030598mg [Setaria
italica]
Length = 312
Score = 53.5 bits (127), Expect = 9e-06
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPY 291
>XP_003578512.1 PREDICTED: transcription initiation factor IIB [Brachypodium
distachyon] KQJ91212.1 hypothetical protein
BRADI_4g36290 [Brachypodium distachyon]
Length = 312
Score = 53.5 bits (127), Expect = 9e-06
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPY 291
>BAK05040.1 predicted protein [Hordeum vulgare subsp. vulgare]
Length = 312
Score = 53.5 bits (127), Expect = 9e-06
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPY 291
>XP_002460572.1 hypothetical protein SORBIDRAFT_02g031020 [Sorghum bicolor]
EER97093.1 hypothetical protein SORBI_002G276900
[Sorghum bicolor]
Length = 312
Score = 53.5 bits (127), Expect = 9e-06
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 204 RRSPISIAAAVIYIVTQLSNDKKPLKG-NLYIIFCVGLQTNSYQTLFTY 61
RRSPISIAAAVIY++TQLS DKKPLK +L G NSY+ L+ Y
Sbjct: 243 RRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPY 291