BLASTX nr result

ID: Panax25_contig00018691 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00018691
         (374 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EOY26354.1 RNA-binding KH domain-containing protein, putative is...    55   2e-06
XP_007023731.2 PREDICTED: KH domain-containing protein HEN4 [The...    55   2e-06
EOY26353.1 RNA-binding KH domain-containing protein, putative is...    55   2e-06
EOY26352.1 RNA-binding KH domain-containing protein, putative is...    55   3e-06
XP_019196873.1 PREDICTED: KH domain-containing protein HEN4 [Ipo...    54   7e-06

>EOY26354.1 RNA-binding KH domain-containing protein, putative isoform 3
           [Theobroma cacao]
          Length = 540

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -2

Query: 208 QHSVQRHFLTQDAVIRVHSRIAEIGFELGAAVVATLLV 95
           +H+ QR+   QDAVIRVHSRIAEIGFE GAA+VA LLV
Sbjct: 317 EHAEQRYSPAQDAVIRVHSRIAEIGFEPGAAIVARLLV 354


>XP_007023731.2 PREDICTED: KH domain-containing protein HEN4 [Theobroma cacao]
          Length = 642

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -2

Query: 208 QHSVQRHFLTQDAVIRVHSRIAEIGFELGAAVVATLLV 95
           +H+ QR+   QDAVIRVHSRIAEIGFE GAA+VA LLV
Sbjct: 317 EHAEQRYSPAQDAVIRVHSRIAEIGFEPGAAIVARLLV 354


>EOY26353.1 RNA-binding KH domain-containing protein, putative isoform 2
           [Theobroma cacao]
          Length = 642

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -2

Query: 208 QHSVQRHFLTQDAVIRVHSRIAEIGFELGAAVVATLLV 95
           +H+ QR+   QDAVIRVHSRIAEIGFE GAA+VA LLV
Sbjct: 317 EHAEQRYSPAQDAVIRVHSRIAEIGFEPGAAIVARLLV 354


>EOY26352.1 RNA-binding KH domain-containing protein, putative isoform 1
           [Theobroma cacao]
          Length = 725

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -2

Query: 208 QHSVQRHFLTQDAVIRVHSRIAEIGFELGAAVVATLLV 95
           +H+ QR+   QDAVIRVHSRIAEIGFE GAA+VA LLV
Sbjct: 375 RHAEQRYSPAQDAVIRVHSRIAEIGFEPGAAIVARLLV 412


>XP_019196873.1 PREDICTED: KH domain-containing protein HEN4 [Ipomoea nil]
          Length = 711

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
 Frame = -2

Query: 208 QHSVQRHFLTQDAVIRVHSRIAEIGFELGAAVVATLLVIN---GYFHGE 71
           ++S QRH   Q+AVIRVHSRIAEIGFE  AAVVA LLV +   GY  G+
Sbjct: 397 ENSEQRHSPAQEAVIRVHSRIAEIGFEPAAAVVARLLVHSNQMGYVFGD 445


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