BLASTX nr result

ID: Panax25_contig00018437 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00018437
         (574 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...   118   2e-27
XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...   118   2e-27
XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...   118   2e-27
KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp...   118   2e-27
XP_019075106.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    77   3e-13
CBI37639.3 unnamed protein product, partial [Vitis vinifera]           77   3e-13
XP_010649440.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    77   3e-13
XP_010649435.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    77   3e-13

>XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Daucus carota
            subsp. sativus]
          Length = 1045

 Score =  118 bits (296), Expect = 2e-27
 Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 5/193 (2%)
 Frame = +3

Query: 3    SIWSSPRLITQHDMCMGPDITARDSMQLFPIIGECFXXXXXXXXXXXXYFQKCGSKHIS- 179
            S+W SP    +  M MGPD T R  MQLF ++  CF             FQK G +  S 
Sbjct: 612  SVWCSPGFTNKDVMFMGPDTTTRAPMQLFQMVA-CFDEDTDLSLDLGNQFQKYGPRESSS 670

Query: 180  ---FECLTPNPFMKTILREAEHFIDEDLLEKKFKIASYDYSADRKNKDCISGYGSMRNNF 350
               + C+TP+   +T   EA+H +  D ++ K K+ SY YS D   K CISG+ +M  NF
Sbjct: 671  KFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKMNSYHYSGD---KGCISGFDNMGYNF 726

Query: 351  GWGNCSTSSCME-SGLKDYGSSQGDIYNFQVDNLDYDLFPKCLDEYSNEIKWSSLEACGK 527
            G  NC  SS +E SGL DY SSQ D  +F+VD+++YD  P   D +S+++K S  +   +
Sbjct: 727  GHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVFDFHSDKVKGSCSKPVDR 786

Query: 528  NRSMTGAEPSHHI 566
            ++  + A  S  +
Sbjct: 787  DKGRSDAASSSRV 799


>XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Daucus carota
            subsp. sativus]
          Length = 1133

 Score =  118 bits (296), Expect = 2e-27
 Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 5/193 (2%)
 Frame = +3

Query: 3    SIWSSPRLITQHDMCMGPDITARDSMQLFPIIGECFXXXXXXXXXXXXYFQKCGSKHIS- 179
            S+W SP    +  M MGPD T R  MQLF ++  CF             FQK G +  S 
Sbjct: 612  SVWCSPGFTNKDVMFMGPDTTTRAPMQLFQMVA-CFDEDTDLSLDLGNQFQKYGPRESSS 670

Query: 180  ---FECLTPNPFMKTILREAEHFIDEDLLEKKFKIASYDYSADRKNKDCISGYGSMRNNF 350
               + C+TP+   +T   EA+H +  D ++ K K+ SY YS D   K CISG+ +M  NF
Sbjct: 671  KFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKMNSYHYSGD---KGCISGFDNMGYNF 726

Query: 351  GWGNCSTSSCME-SGLKDYGSSQGDIYNFQVDNLDYDLFPKCLDEYSNEIKWSSLEACGK 527
            G  NC  SS +E SGL DY SSQ D  +F+VD+++YD  P   D +S+++K S  +   +
Sbjct: 727  GHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVFDFHSDKVKGSCSKPVDR 786

Query: 528  NRSMTGAEPSHHI 566
            ++  + A  S  +
Sbjct: 787  DKGRSDAASSSRV 799


>XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Daucus carota
            subsp. sativus]
          Length = 1235

 Score =  118 bits (296), Expect = 2e-27
 Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 5/193 (2%)
 Frame = +3

Query: 3    SIWSSPRLITQHDMCMGPDITARDSMQLFPIIGECFXXXXXXXXXXXXYFQKCGSKHIS- 179
            S+W SP    +  M MGPD T R  MQLF ++  CF             FQK G +  S 
Sbjct: 612  SVWCSPGFTNKDVMFMGPDTTTRAPMQLFQMVA-CFDEDTDLSLDLGNQFQKYGPRESSS 670

Query: 180  ---FECLTPNPFMKTILREAEHFIDEDLLEKKFKIASYDYSADRKNKDCISGYGSMRNNF 350
               + C+TP+   +T   EA+H +  D ++ K K+ SY YS D   K CISG+ +M  NF
Sbjct: 671  KFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKMNSYHYSGD---KGCISGFDNMGYNF 726

Query: 351  GWGNCSTSSCME-SGLKDYGSSQGDIYNFQVDNLDYDLFPKCLDEYSNEIKWSSLEACGK 527
            G  NC  SS +E SGL DY SSQ D  +F+VD+++YD  P   D +S+++K S  +   +
Sbjct: 727  GHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVFDFHSDKVKGSCSKPVDR 786

Query: 528  NRSMTGAEPSHHI 566
            ++  + A  S  +
Sbjct: 787  DKGRSDAASSSRV 799


>KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp. sativus]
          Length = 1344

 Score =  118 bits (296), Expect = 2e-27
 Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 5/193 (2%)
 Frame = +3

Query: 3    SIWSSPRLITQHDMCMGPDITARDSMQLFPIIGECFXXXXXXXXXXXXYFQKCGSKHIS- 179
            S+W SP    +  M MGPD T R  MQLF ++  CF             FQK G +  S 
Sbjct: 716  SVWCSPGFTNKDVMFMGPDTTTRAPMQLFQMVA-CFDEDTDLSLDLGNQFQKYGPRESSS 774

Query: 180  ---FECLTPNPFMKTILREAEHFIDEDLLEKKFKIASYDYSADRKNKDCISGYGSMRNNF 350
               + C+TP+   +T   EA+H +  D ++ K K+ SY YS D   K CISG+ +M  NF
Sbjct: 775  KFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKMNSYHYSGD---KGCISGFDNMGYNF 830

Query: 351  GWGNCSTSSCME-SGLKDYGSSQGDIYNFQVDNLDYDLFPKCLDEYSNEIKWSSLEACGK 527
            G  NC  SS +E SGL DY SSQ D  +F+VD+++YD  P   D +S+++K S  +   +
Sbjct: 831  GHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVFDFHSDKVKGSCSKPVDR 890

Query: 528  NRSMTGAEPSHHI 566
            ++  + A  S  +
Sbjct: 891  DKGRSDAASSSRV 903


>XP_019075106.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Vitis
            vinifera]
          Length = 1164

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
 Frame = +3

Query: 3    SIWSSPRLITQHDMCMGPDITARDSMQLFPIIGECFXXXXXXXXXXXXYFQKCGSKHISF 182
            S W S RL T+ +MC G D  +RDS++      E F               K GS H+S 
Sbjct: 519  SDWPSSRLKTKPEMCTGLDFMSRDSLKSLSTYRERFAVENNLPPDSVEQSGKFGSGHLSL 578

Query: 183  --EC--LTPNPFMKTILREAEHFIDEDLLEKKF---KIASYDYSADRKNKDCISGYGSMR 341
              EC  +      +T   + EHF  E+  +      +  SY++  D ++   I  +  M 
Sbjct: 579  NSECCSMVSQSLFQTTPWDVEHFTHENTPQGGLGSDRNVSYEHFIDSESGGWIFSHDIMP 638

Query: 342  NNFGWGNCSTSSCMES--GLKDYGSSQGDIYN-FQVDNLDYDLFPKCLDEYSNEIKWSSL 512
            ++    NCS+SSC+ +  GLKDY     DIY   + +NLD    P+  D  S E  W   
Sbjct: 639  SSSSQENCSSSSCINTGLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYS 698

Query: 513  EACGKNRSMTGAEPS 557
            ++CGK+ +   A PS
Sbjct: 699  KSCGKDNNNNRAVPS 713


>CBI37639.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1230

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
 Frame = +3

Query: 3    SIWSSPRLITQHDMCMGPDITARDSMQLFPIIGECFXXXXXXXXXXXXYFQKCGSKHISF 182
            S W S RL T+ +MC G D  +RDS++      E F               K GS H+S 
Sbjct: 585  SDWPSSRLKTKPEMCTGLDFMSRDSLKSLSTYRERFAVENNLPPDSVEQSGKFGSGHLSL 644

Query: 183  --EC--LTPNPFMKTILREAEHFIDEDLLEKKF---KIASYDYSADRKNKDCISGYGSMR 341
              EC  +      +T   + EHF  E+  +      +  SY++  D ++   I  +  M 
Sbjct: 645  NSECCSMVSQSLFQTTPWDVEHFTHENTPQGGLGSDRNVSYEHFIDSESGGWIFSHDIMP 704

Query: 342  NNFGWGNCSTSSCMES--GLKDYGSSQGDIYN-FQVDNLDYDLFPKCLDEYSNEIKWSSL 512
            ++    NCS+SSC+ +  GLKDY     DIY   + +NLD    P+  D  S E  W   
Sbjct: 705  SSSSQENCSSSSCINTGLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYS 764

Query: 513  EACGKNRSMTGAEPS 557
            ++CGK+ +   A PS
Sbjct: 765  KSCGKDNNNNRAVPS 779


>XP_010649440.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Vitis
            vinifera]
          Length = 1245

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
 Frame = +3

Query: 3    SIWSSPRLITQHDMCMGPDITARDSMQLFPIIGECFXXXXXXXXXXXXYFQKCGSKHISF 182
            S W S RL T+ +MC G D  +RDS++      E F               K GS H+S 
Sbjct: 604  SDWPSSRLKTKPEMCTGLDFMSRDSLKSLSTYRERFAVENNLPPDSVEQSGKFGSGHLSL 663

Query: 183  --EC--LTPNPFMKTILREAEHFIDEDLLEKKF---KIASYDYSADRKNKDCISGYGSMR 341
              EC  +      +T   + EHF  E+  +      +  SY++  D ++   I  +  M 
Sbjct: 664  NSECCSMVSQSLFQTTPWDVEHFTHENTPQGGLGSDRNVSYEHFIDSESGGWIFSHDIMP 723

Query: 342  NNFGWGNCSTSSCMES--GLKDYGSSQGDIYN-FQVDNLDYDLFPKCLDEYSNEIKWSSL 512
            ++    NCS+SSC+ +  GLKDY     DIY   + +NLD    P+  D  S E  W   
Sbjct: 724  SSSSQENCSSSSCINTGLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYS 783

Query: 513  EACGKNRSMTGAEPS 557
            ++CGK+ +   A PS
Sbjct: 784  KSCGKDNNNNRAVPS 798


>XP_010649435.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Vitis
            vinifera] XP_010649438.1 PREDICTED: DNA mismatch repair
            protein MLH3 isoform X1 [Vitis vinifera] XP_010649439.1
            PREDICTED: DNA mismatch repair protein MLH3 isoform X1
            [Vitis vinifera]
          Length = 1249

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
 Frame = +3

Query: 3    SIWSSPRLITQHDMCMGPDITARDSMQLFPIIGECFXXXXXXXXXXXXYFQKCGSKHISF 182
            S W S RL T+ +MC G D  +RDS++      E F               K GS H+S 
Sbjct: 604  SDWPSSRLKTKPEMCTGLDFMSRDSLKSLSTYRERFAVENNLPPDSVEQSGKFGSGHLSL 663

Query: 183  --EC--LTPNPFMKTILREAEHFIDEDLLEKKF---KIASYDYSADRKNKDCISGYGSMR 341
              EC  +      +T   + EHF  E+  +      +  SY++  D ++   I  +  M 
Sbjct: 664  NSECCSMVSQSLFQTTPWDVEHFTHENTPQGGLGSDRNVSYEHFIDSESGGWIFSHDIMP 723

Query: 342  NNFGWGNCSTSSCMES--GLKDYGSSQGDIYN-FQVDNLDYDLFPKCLDEYSNEIKWSSL 512
            ++    NCS+SSC+ +  GLKDY     DIY   + +NLD    P+  D  S E  W   
Sbjct: 724  SSSSQENCSSSSCINTGLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYS 783

Query: 513  EACGKNRSMTGAEPS 557
            ++CGK+ +   A PS
Sbjct: 784  KSCGKDNNNNRAVPS 798


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