BLASTX nr result

ID: Panax25_contig00018059 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00018059
         (928 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017219543.1 PREDICTED: protein SPT2 homolog isoform X1 [Daucu...    52   1e-07
KZM88768.1 hypothetical protein DCAR_025843 [Daucus carota subsp...    52   1e-07
XP_017219544.1 PREDICTED: protein SPT2 homolog isoform X2 [Daucu...    52   1e-07

>XP_017219543.1 PREDICTED: protein SPT2 homolog isoform X1 [Daucus carota subsp.
           sativus]
          Length = 498

 Score = 52.0 bits (123), Expect(2) = 1e-07
 Identities = 23/27 (85%), Positives = 27/27 (100%)
 Frame = -2

Query: 81  LKTKTKVQMLKNTRDYSFLLSDDAELP 1
           ++T+TKVQMLKNTRDYSFLLSDDAE+P
Sbjct: 149 MQTQTKVQMLKNTRDYSFLLSDDAEIP 175



 Score = 32.7 bits (73), Expect(2) = 1e-07
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 173 LQNNKVHASSPHGSRPRVNDHPPK 102
           L N+KVHAS+  GS  R+N HP K
Sbjct: 121 LSNHKVHASASSGSSSRLNGHPTK 144


>KZM88768.1 hypothetical protein DCAR_025843 [Daucus carota subsp. sativus]
          Length = 493

 Score = 52.0 bits (123), Expect(2) = 1e-07
 Identities = 23/27 (85%), Positives = 27/27 (100%)
 Frame = -2

Query: 81  LKTKTKVQMLKNTRDYSFLLSDDAELP 1
           ++T+TKVQMLKNTRDYSFLLSDDAE+P
Sbjct: 149 MQTQTKVQMLKNTRDYSFLLSDDAEIP 175



 Score = 32.7 bits (73), Expect(2) = 1e-07
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 173 LQNNKVHASSPHGSRPRVNDHPPK 102
           L N+KVHAS+  GS  R+N HP K
Sbjct: 121 LSNHKVHASASSGSSSRLNGHPTK 144


>XP_017219544.1 PREDICTED: protein SPT2 homolog isoform X2 [Daucus carota subsp.
           sativus]
          Length = 486

 Score = 52.0 bits (123), Expect(2) = 1e-07
 Identities = 23/27 (85%), Positives = 27/27 (100%)
 Frame = -2

Query: 81  LKTKTKVQMLKNTRDYSFLLSDDAELP 1
           ++T+TKVQMLKNTRDYSFLLSDDAE+P
Sbjct: 149 MQTQTKVQMLKNTRDYSFLLSDDAEIP 175



 Score = 32.7 bits (73), Expect(2) = 1e-07
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 173 LQNNKVHASSPHGSRPRVNDHPPK 102
           L N+KVHAS+  GS  R+N HP K
Sbjct: 121 LSNHKVHASASSGSSSRLNGHPTK 144


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