BLASTX nr result
ID: Panax25_contig00017821
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax25_contig00017821 (1294 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_006343727.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop... 408 e-130 XP_004242994.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop... 407 e-130 XP_018818702.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop... 400 e-128 XP_015081184.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop... 403 e-128 XP_011069585.1 PREDICTED: DNA-directed RNA polymerase 3B, chloro... 397 e-128 XP_018818701.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop... 400 e-127 XP_011069584.1 PREDICTED: DNA-directed RNA polymerase 3B, chloro... 397 e-127 XP_011069583.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop... 397 e-126 XP_012837864.1 PREDICTED: DNA-directed RNA polymerase 3B, chloro... 395 e-125 EYU37150.1 hypothetical protein MIMGU_mgv1a000925mg [Erythranthe... 389 e-123 NP_001289533.1 DNA-directed RNA polymerase 3, chloroplastic [Nic... 383 e-120 XP_015580378.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 381 e-119 EEF33998.1 DNA-directed RNA polymerase 3B, chloroplast precursor... 381 e-119 ONH98785.1 hypothetical protein PRUPE_7G266200 [Prunus persica] 379 e-119 XP_017250907.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop... 380 e-119 XP_007203225.1 hypothetical protein PRUPE_ppa000868mg [Prunus pe... 379 e-119 XP_016459970.1 PREDICTED: DNA-directed RNA polymerase 3B, chloro... 379 e-119 GAV88805.1 RNA_pol domain-containing protein [Cephalotus follicu... 379 e-119 NP_001312292.1 DNA-directed RNA polymerase 3B, chloroplastic [Ni... 377 e-118 EOY31498.1 DNA/RNA polymerases superfamily protein isoform 3 [Th... 371 e-116 >XP_006343727.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum tuberosum] Length = 1015 Score = 408 bits (1049), Expect = e-130 Identities = 229/407 (56%), Positives = 275/407 (67%), Gaps = 5/407 (1%) Frame = -3 Query: 1220 SSLIYHPIPSLPPSCQKRQSFAEMASLSPTPKAQLHSSWRPKIRKLNQNSNTHSHLLFIS 1041 S + YHPIP L A AS SP+P + S WR K +K +N F+ Sbjct: 26 SFINYHPIPPL--------KLASSASYSPSPPS---SQWR-KTQKSQKNC-------FLY 66 Query: 1040 TPISQRFLTNPSLCSSSFPYNLKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQTIT 861 SQ FL +SSFP LKLP + PI++H + STDENLTEN E+L NLQ I Sbjct: 67 GIHSQEFLKLSQ--TSSFPKTLKLPVIQLPITVHSEVVCVSTDENLTENLEELVNLQKIP 124 Query: 860 IGLNQI-PPQSTQRIFIQDPPWINSLFMRNLYNRTKQ--RVKIEFKEIERRKYY-LLRRR 693 G + +S +R+FIQDPPW++SLFM +L+ R KQ V+ EF+EIERR+ Y +LRRR Sbjct: 125 NGYPLVLQKESNKRVFIQDPPWVSSLFMNSLFVRAKQVKGVRREFREIERRRRYAMLRRR 184 Query: 692 QIKAETEAWENMVEEYRELEKEMCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQTR 513 QIKAETEAWE MVEEYRELE+EMCEKKLAPNLPYVKKL LGWFEPLR+AI KEQ ++ T+ Sbjct: 185 QIKAETEAWEQMVEEYRELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAEMTQ 244 Query: 512 KHKAAYSPHIDCLPADKMAVIVMHKMMALLMM-GQEGRCXXXXXXXXXXXXXXXQEVRIH 336 KH+ AY+PHID LPADKMAVIVMHK+M LLMM G+E RC EVRIH Sbjct: 245 KHRTAYAPHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIH 304 Query: 335 SFLEKTKKYHKGKIVTQAQEDLSKETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRD 156 +F+EKTKK+ K Q QED+S+ET V+KL+ +EE +SWGRD Sbjct: 305 NFMEKTKKHQKHMSGAQGQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWGRD 364 Query: 155 TQAKLGCRLIELLTETAYVQPPIDQSADAPPDIRPAFRHKFKIVAKD 15 TQAKLGCRL+ELLTETAYVQPP+DQSAD PPDIRPAFRH F+I +D Sbjct: 365 TQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRD 411 >XP_004242994.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum lycopersicum] Length = 1007 Score = 407 bits (1047), Expect = e-130 Identities = 228/409 (55%), Positives = 274/409 (66%), Gaps = 5/409 (1%) Frame = -3 Query: 1226 LPSSLIYHPIPSLPPSCQKRQSFAEMASLSPTPKAQLHSSWRPKIRKLNQNSNTHSHLLF 1047 L S L + + SLP A AS SPTP + S WR K +K +N H Sbjct: 8 LTSQLSSNFLCSLPYPLSPPLKLASSASYSPTPAS---SQWR-KAQKSQKNCTFHGIY-- 61 Query: 1046 ISTPISQRFLTNPSLCSSSFPYNLKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQT 867 +Q FL +SSFP LKLP + PI++H + STDENLTEN E+L NLQ Sbjct: 62 -----NQEFLKLSQ--TSSFPKTLKLPIIQLPITVHSEVVCVSTDENLTENLEELVNLQK 114 Query: 866 ITIGLNQI-PPQSTQRIFIQDPPWINSLFMRNLYNRTKQ--RVKIEFKEIERRKYY-LLR 699 I G + +S +R+FIQDPPW++SLFM NL+ R KQ V+ EF+EIERR+ Y +LR Sbjct: 115 IPNGYPLVLQKESNKRVFIQDPPWVSSLFMNNLFVRAKQVKGVRREFREIERRRRYAMLR 174 Query: 698 RRQIKAETEAWENMVEEYRELEKEMCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQ 519 RRQIKAETEAWE MVEEYRELE+EMCEKKLAPNLPYVKKL LGWFEPLR+AI +EQ ++ Sbjct: 175 RRQIKAETEAWEQMVEEYRELEREMCEKKLAPNLPYVKKLMLGWFEPLRQAIEREQNAEM 234 Query: 518 TRKHKAAYSPHIDCLPADKMAVIVMHKMMALLMM-GQEGRCXXXXXXXXXXXXXXXQEVR 342 T+KH+ AY+PHID LPADKMAVIVMHK+M LLMM G+E RC EVR Sbjct: 235 TQKHRTAYAPHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVR 294 Query: 341 IHSFLEKTKKYHKGKIVTQAQEDLSKETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWG 162 IH+F+EKTKK+ K Q QED+S+ET V+KL+ +EE +SWG Sbjct: 295 IHNFMEKTKKHQKHMTGAQGQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWG 354 Query: 161 RDTQAKLGCRLIELLTETAYVQPPIDQSADAPPDIRPAFRHKFKIVAKD 15 RDTQAKLGCRL+ELLTETAYVQPP+DQSAD PPDIRPAFRH F+I +D Sbjct: 355 RDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRD 403 >XP_018818702.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X2 [Juglans regia] Length = 883 Score = 400 bits (1029), Expect = e-128 Identities = 224/385 (58%), Positives = 258/385 (67%), Gaps = 4/385 (1%) Frame = -3 Query: 1148 ASLSPTPKAQLH-SSWR--PKIRKLNQNSNTHSHLLFISTPISQRFLTNPSLCSSSFPYN 978 AS P+P+AQ+H ++WR PKI N+ +H +L F+ + S F PSL + FP N Sbjct: 5 ASFYPSPRAQIHPTTWRRPPKI-----NTKSHKNLYFLFSSNSNTFF-KPSLSPTPFPLN 58 Query: 977 LKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQTITIGLNQIPP-QSTQRIFIQDPP 801 LK PS NPI L PLSDS +NL EN E N + QI P +S RIFIQDPP Sbjct: 59 LKSPS--NPIQ--LLPLSDSVQDNLVENLESSMNSLMPINEIGQITPLESCPRIFIQDPP 114 Query: 800 WINSLFMRNLYNRTKQRVKIEFKEIERRKYYLLRRRQIKAETEAWENMVEEYRELEKEMC 621 WI SLF++ LY RT Q VK+EFKE+++ KY LLRRRQIKAETEAWE MVEEYRELE+EMC Sbjct: 115 WIASLFLKGLYKRTDQEVKLEFKEMDKSKYNLLRRRQIKAETEAWERMVEEYRELEREMC 174 Query: 620 EKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQTRKHKAAYSPHIDCLPADKMAVIVMH 441 EKKLAPNLPYVK LFLGWFEP R+AI +EQK Q+T K KAA++PHID LPADKMAVIVMH Sbjct: 175 EKKLAPNLPYVKALFLGWFEPFRDAIEREQKMQRTDKQKAAFAPHIDALPADKMAVIVMH 234 Query: 440 KMMALLMMGQEGRCXXXXXXXXXXXXXXXQEVRIHSFLEKTKKYHKGKIVTQAQEDLSKE 261 KMM L M G + QEVRIHSFLEKTK Y IV +E L KE Sbjct: 235 KMMGLFMAGAQEGFVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYRSKNIVAGTEEGLRKE 294 Query: 260 TXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRDTQAKLGCRLIELLTETAYVQPPIDQ 81 VQKL+ EEIK W RDTQAKLGC LIELLT +AYVQPP++Q Sbjct: 295 KEILMKHVNSLVRKRRLKEVQKLLKKEEIKPWSRDTQAKLGCLLIELLTGSAYVQPPLNQ 354 Query: 80 SADAPPDIRPAFRHKFKIVAKDARQ 6 SAD PPDIRPAFRHK+K V K+ RQ Sbjct: 355 SADGPPDIRPAFRHKYKAVIKNPRQ 379 >XP_015081184.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum pennellii] Length = 1036 Score = 403 bits (1036), Expect = e-128 Identities = 225/399 (56%), Positives = 269/399 (67%), Gaps = 6/399 (1%) Frame = -3 Query: 1193 SLPPSCQKRQSFAEMASLSPTPKAQLHSSWRPKIRKLNQNSNTHS-HLLFISTPISQRFL 1017 SLP A AS SPTP + S WR K +K +N H H +Q FL Sbjct: 48 SLPYPLSPPLKLASSASYSPTPAS---SQWR-KAQKSPKNCTFHGIH--------NQEFL 95 Query: 1016 TNPSLCSSSFPYNLKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQTITIGLNQI-P 840 +SSFP LKLP + PI++H + STDENLTEN E+L NLQ I G + Sbjct: 96 KLSQ--TSSFPKTLKLPIIQLPITVHSEVVCVSTDENLTENLEELVNLQKIPNGYPLVLQ 153 Query: 839 PQSTQRIFIQDPPWINSLFMRNLYNRTKQ--RVKIEFKEI-ERRKYYLLRRRQIKAETEA 669 +S +R+FIQDPPW++SLFM NL+ R KQ V+ EF+EI RR+Y +LRRRQIKAETEA Sbjct: 154 KESNKRVFIQDPPWVSSLFMNNLFVRAKQVKGVRREFREIARRRRYAMLRRRQIKAETEA 213 Query: 668 WENMVEEYRELEKEMCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQTRKHKAAYSP 489 WE MVEEYRELE+EMCEKKLAPNLPYVKKL LGWFEPLR+AI +EQ ++ T+KH+ AY+P Sbjct: 214 WEQMVEEYRELEREMCEKKLAPNLPYVKKLMLGWFEPLRQAIEREQNAEMTQKHRTAYAP 273 Query: 488 HIDCLPADKMAVIVMHKMMALLMM-GQEGRCXXXXXXXXXXXXXXXQEVRIHSFLEKTKK 312 HID LPADKMAVIVMHK+M LLMM G+E RC EVRIH+F+EKTKK Sbjct: 274 HIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFMEKTKK 333 Query: 311 YHKGKIVTQAQEDLSKETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRDTQAKLGCR 132 + K Q QED+S+ET V+KL+ +EE +SWGRDTQAKLGCR Sbjct: 334 HQKHMTGAQGQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWGRDTQAKLGCR 393 Query: 131 LIELLTETAYVQPPIDQSADAPPDIRPAFRHKFKIVAKD 15 L+ELLTETAYVQPP+DQSAD PPDIRPAFRH F+I +D Sbjct: 394 LLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRD 432 >XP_011069585.1 PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X3 [Sesamum indicum] Length = 816 Score = 397 bits (1021), Expect = e-128 Identities = 209/352 (59%), Positives = 252/352 (71%), Gaps = 4/352 (1%) Frame = -3 Query: 1046 ISTPISQRFLTNPSLCSSSFPYNLKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQT 867 +STP F +P SS FP LKLPS+ NP + P+SD TD++ E L+ LQ Sbjct: 1 MSTPEIPSFSQSPQFSSSPFPQTLKLPSIHNPAPLLPPPISDCTDDSFPGKPEKLSTLQV 60 Query: 866 ITIGL-NQIPPQSTQRIFIQDPPWINSLFMRNLYNRTKQR--VKIEFKEIERRKYYLLRR 696 + G + + +S+ R FIQDPPWI+SL+M++L R+K R VKIEF+E ERRKYYLLRR Sbjct: 61 MPNGFQSNLTKESSGRGFIQDPPWISSLYMKSLLFRSKNRSEVKIEFQETERRKYYLLRR 120 Query: 695 RQIKAETEAWENMVEEYRELEKEMCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQT 516 RQIKAETEAWENMVEEYRELE+EMCEKKLAPNLPYVKKL LGWFEPLREAI KEQ SQ++ Sbjct: 121 RQIKAETEAWENMVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNSQRS 180 Query: 515 RKHKAAYSPHIDCLPADKMAVIVMHKMMALLMM-GQEGRCXXXXXXXXXXXXXXXQEVRI 339 +K KAA++P ID LPADKMAVIVMHK+M+LLMM G+E RC EVRI Sbjct: 181 KKQKAAFAPFIDALPADKMAVIVMHKIMSLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRI 240 Query: 338 HSFLEKTKKYHKGKIVTQAQEDLSKETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGR 159 H+FLEKTKKY + + V + +ED KE VQKLV NEE KSW R Sbjct: 241 HNFLEKTKKYQRKETVAETEEDSKKEAAILRKRVKSLIRRNRVIEVQKLVRNEESKSWSR 300 Query: 158 DTQAKLGCRLIELLTETAYVQPPIDQSADAPPDIRPAFRHKFKIVAKDARQS 3 DTQAKLGC LIELLT++AYVQPP++QSAD+PPD+RPAFRH FKI +++ Q+ Sbjct: 301 DTQAKLGCCLIELLTQSAYVQPPVNQSADSPPDVRPAFRHFFKIAPRESGQN 352 >XP_018818701.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1 [Juglans regia] Length = 981 Score = 400 bits (1029), Expect = e-127 Identities = 224/385 (58%), Positives = 258/385 (67%), Gaps = 4/385 (1%) Frame = -3 Query: 1148 ASLSPTPKAQLH-SSWR--PKIRKLNQNSNTHSHLLFISTPISQRFLTNPSLCSSSFPYN 978 AS P+P+AQ+H ++WR PKI N+ +H +L F+ + S F PSL + FP N Sbjct: 5 ASFYPSPRAQIHPTTWRRPPKI-----NTKSHKNLYFLFSSNSNTFF-KPSLSPTPFPLN 58 Query: 977 LKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQTITIGLNQIPP-QSTQRIFIQDPP 801 LK PS NPI L PLSDS +NL EN E N + QI P +S RIFIQDPP Sbjct: 59 LKSPS--NPIQ--LLPLSDSVQDNLVENLESSMNSLMPINEIGQITPLESCPRIFIQDPP 114 Query: 800 WINSLFMRNLYNRTKQRVKIEFKEIERRKYYLLRRRQIKAETEAWENMVEEYRELEKEMC 621 WI SLF++ LY RT Q VK+EFKE+++ KY LLRRRQIKAETEAWE MVEEYRELE+EMC Sbjct: 115 WIASLFLKGLYKRTDQEVKLEFKEMDKSKYNLLRRRQIKAETEAWERMVEEYRELEREMC 174 Query: 620 EKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQTRKHKAAYSPHIDCLPADKMAVIVMH 441 EKKLAPNLPYVK LFLGWFEP R+AI +EQK Q+T K KAA++PHID LPADKMAVIVMH Sbjct: 175 EKKLAPNLPYVKALFLGWFEPFRDAIEREQKMQRTDKQKAAFAPHIDALPADKMAVIVMH 234 Query: 440 KMMALLMMGQEGRCXXXXXXXXXXXXXXXQEVRIHSFLEKTKKYHKGKIVTQAQEDLSKE 261 KMM L M G + QEVRIHSFLEKTK Y IV +E L KE Sbjct: 235 KMMGLFMAGAQEGFVQVVQAAVQIGMAIEQEVRIHSFLEKTKNYRSKNIVAGTEEGLRKE 294 Query: 260 TXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRDTQAKLGCRLIELLTETAYVQPPIDQ 81 VQKL+ EEIK W RDTQAKLGC LIELLT +AYVQPP++Q Sbjct: 295 KEILMKHVNSLVRKRRLKEVQKLLKKEEIKPWSRDTQAKLGCLLIELLTGSAYVQPPLNQ 354 Query: 80 SADAPPDIRPAFRHKFKIVAKDARQ 6 SAD PPDIRPAFRHK+K V K+ RQ Sbjct: 355 SADGPPDIRPAFRHKYKAVIKNPRQ 379 >XP_011069584.1 PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X2 [Sesamum indicum] Length = 884 Score = 397 bits (1021), Expect = e-127 Identities = 209/352 (59%), Positives = 252/352 (71%), Gaps = 4/352 (1%) Frame = -3 Query: 1046 ISTPISQRFLTNPSLCSSSFPYNLKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQT 867 +STP F +P SS FP LKLPS+ NP + P+SD TD++ E L+ LQ Sbjct: 1 MSTPEIPSFSQSPQFSSSPFPQTLKLPSIHNPAPLLPPPISDCTDDSFPGKPEKLSTLQV 60 Query: 866 ITIGL-NQIPPQSTQRIFIQDPPWINSLFMRNLYNRTKQR--VKIEFKEIERRKYYLLRR 696 + G + + +S+ R FIQDPPWI+SL+M++L R+K R VKIEF+E ERRKYYLLRR Sbjct: 61 MPNGFQSNLTKESSGRGFIQDPPWISSLYMKSLLFRSKNRSEVKIEFQETERRKYYLLRR 120 Query: 695 RQIKAETEAWENMVEEYRELEKEMCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQT 516 RQIKAETEAWENMVEEYRELE+EMCEKKLAPNLPYVKKL LGWFEPLREAI KEQ SQ++ Sbjct: 121 RQIKAETEAWENMVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNSQRS 180 Query: 515 RKHKAAYSPHIDCLPADKMAVIVMHKMMALLMM-GQEGRCXXXXXXXXXXXXXXXQEVRI 339 +K KAA++P ID LPADKMAVIVMHK+M+LLMM G+E RC EVRI Sbjct: 181 KKQKAAFAPFIDALPADKMAVIVMHKIMSLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRI 240 Query: 338 HSFLEKTKKYHKGKIVTQAQEDLSKETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGR 159 H+FLEKTKKY + + V + +ED KE VQKLV NEE KSW R Sbjct: 241 HNFLEKTKKYQRKETVAETEEDSKKEAAILRKRVKSLIRRNRVIEVQKLVRNEESKSWSR 300 Query: 158 DTQAKLGCRLIELLTETAYVQPPIDQSADAPPDIRPAFRHKFKIVAKDARQS 3 DTQAKLGC LIELLT++AYVQPP++QSAD+PPD+RPAFRH FKI +++ Q+ Sbjct: 301 DTQAKLGCCLIELLTQSAYVQPPVNQSADSPPDVRPAFRHFFKIAPRESGQN 352 >XP_011069583.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1 [Sesamum indicum] Length = 952 Score = 397 bits (1021), Expect = e-126 Identities = 209/352 (59%), Positives = 252/352 (71%), Gaps = 4/352 (1%) Frame = -3 Query: 1046 ISTPISQRFLTNPSLCSSSFPYNLKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQT 867 +STP F +P SS FP LKLPS+ NP + P+SD TD++ E L+ LQ Sbjct: 1 MSTPEIPSFSQSPQFSSSPFPQTLKLPSIHNPAPLLPPPISDCTDDSFPGKPEKLSTLQV 60 Query: 866 ITIGL-NQIPPQSTQRIFIQDPPWINSLFMRNLYNRTKQR--VKIEFKEIERRKYYLLRR 696 + G + + +S+ R FIQDPPWI+SL+M++L R+K R VKIEF+E ERRKYYLLRR Sbjct: 61 MPNGFQSNLTKESSGRGFIQDPPWISSLYMKSLLFRSKNRSEVKIEFQETERRKYYLLRR 120 Query: 695 RQIKAETEAWENMVEEYRELEKEMCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQT 516 RQIKAETEAWENMVEEYRELE+EMCEKKLAPNLPYVKKL LGWFEPLREAI KEQ SQ++ Sbjct: 121 RQIKAETEAWENMVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNSQRS 180 Query: 515 RKHKAAYSPHIDCLPADKMAVIVMHKMMALLMM-GQEGRCXXXXXXXXXXXXXXXQEVRI 339 +K KAA++P ID LPADKMAVIVMHK+M+LLMM G+E RC EVRI Sbjct: 181 KKQKAAFAPFIDALPADKMAVIVMHKIMSLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRI 240 Query: 338 HSFLEKTKKYHKGKIVTQAQEDLSKETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGR 159 H+FLEKTKKY + + V + +ED KE VQKLV NEE KSW R Sbjct: 241 HNFLEKTKKYQRKETVAETEEDSKKEAAILRKRVKSLIRRNRVIEVQKLVRNEESKSWSR 300 Query: 158 DTQAKLGCRLIELLTETAYVQPPIDQSADAPPDIRPAFRHKFKIVAKDARQS 3 DTQAKLGC LIELLT++AYVQPP++QSAD+PPD+RPAFRH FKI +++ Q+ Sbjct: 301 DTQAKLGCCLIELLTQSAYVQPPVNQSADSPPDVRPAFRHFFKIAPRESGQN 352 >XP_012837864.1 PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic [Erythranthe guttata] Length = 953 Score = 395 bits (1015), Expect = e-125 Identities = 209/347 (60%), Positives = 248/347 (71%), Gaps = 4/347 (1%) Frame = -3 Query: 1046 ISTPISQRFLTNPSLCSSSFPYNLKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQT 867 +STP + +P SSSFP NLKLPSL NP + P+SDS+D+N N + +A LQ Sbjct: 1 MSTPEAPILSQSPQFSSSSFPQNLKLPSLHNPALLLPPPVSDSSDDNFRGNLDKVATLQV 60 Query: 866 ITIGL-NQIPPQSTQRIFIQDPPWINSLFMRNLYNRTKQR--VKIEFKEIERRKYYLLRR 696 I G + +S R+FIQDPPWI+SLFM+NL R++ R VKIEF+E+ERRKYYLLRR Sbjct: 61 IPNGFPSNFTKESKDRVFIQDPPWISSLFMKNLLFRSRNRGGVKIEFQEMERRKYYLLRR 120 Query: 695 RQIKAETEAWENMVEEYRELEKEMCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQT 516 RQ+KAETEAWEN VEEYRELE+EMCEKKLAPNLPYVKKL LGWFEPLREAI KEQ +Q++ Sbjct: 121 RQVKAETEAWENKVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNTQRS 180 Query: 515 RKHKAAYSPHIDCLPADKMAVIVMHKMMALLMM-GQEGRCXXXXXXXXXXXXXXXQEVRI 339 +K+KAA++P ID LPADKMAVIVMHKMM LLMM G+E RC EVRI Sbjct: 181 KKNKAAFAPFIDALPADKMAVIVMHKMMGLLMMGGKEDRCVRVVEAAVQIGVAVENEVRI 240 Query: 338 HSFLEKTKKYHKGKIVTQAQEDLSKETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGR 159 HSFLEK KK K +I ++Q D S E V KLV +EE KSWGR Sbjct: 241 HSFLEKMKKNEKREIGDESQVDSSNEAVIMRKRVKSLIKRNRVIEVHKLVRSEEFKSWGR 300 Query: 158 DTQAKLGCRLIELLTETAYVQPPIDQSADAPPDIRPAFRHKFKIVAK 18 D QAKLGC LIELLT++AYVQPP++QSAD+PPD+RPAFRH FKI + Sbjct: 301 DIQAKLGCCLIELLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATR 347 >EYU37150.1 hypothetical protein MIMGU_mgv1a000925mg [Erythranthe guttata] Length = 941 Score = 389 bits (1000), Expect = e-123 Identities = 207/346 (59%), Positives = 245/346 (70%), Gaps = 3/346 (0%) Frame = -3 Query: 1046 ISTPISQRFLTNPSLCSSSFPYNLKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQT 867 +STP + +P SSSFP NLKLPSL NP + P+SDS+D+N N + +A LQ Sbjct: 1 MSTPEAPILSQSPQFSSSSFPQNLKLPSLHNPALLLPPPVSDSSDDNFRGNLDKVATLQ- 59 Query: 866 ITIGLNQIPPQSTQRIFIQDPPWINSLFMRNLYNRTKQR--VKIEFKEIERRKYYLLRRR 693 +S R+FIQDPPWI+SLFM+NL R++ R VKIEF+E+ERRKYYLLRRR Sbjct: 60 ----------ESKDRVFIQDPPWISSLFMKNLLFRSRNRGGVKIEFQEMERRKYYLLRRR 109 Query: 692 QIKAETEAWENMVEEYRELEKEMCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQTR 513 Q+KAETEAWEN VEEYRELE+EMCEKKLAPNLPYVKKL LGWFEPLREAI KEQ +Q+++ Sbjct: 110 QVKAETEAWENKVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNTQRSK 169 Query: 512 KHKAAYSPHIDCLPADKMAVIVMHKMMALLMM-GQEGRCXXXXXXXXXXXXXXXQEVRIH 336 K+KAA++P ID LPADKMAVIVMHKMM LLMM G+E RC EVRIH Sbjct: 170 KNKAAFAPFIDALPADKMAVIVMHKMMGLLMMGGKEDRCVRVVEAAVQIGVAVENEVRIH 229 Query: 335 SFLEKTKKYHKGKIVTQAQEDLSKETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRD 156 SFLEK KK K +I ++Q D S E V KLV +EE KSWGRD Sbjct: 230 SFLEKMKKNEKREIGDESQVDSSNEAVIMRKRVKSLIKRNRVIEVHKLVRSEEFKSWGRD 289 Query: 155 TQAKLGCRLIELLTETAYVQPPIDQSADAPPDIRPAFRHKFKIVAK 18 QAKLGC LIELLT++AYVQPP++QSAD+PPD+RPAFRH FKI + Sbjct: 290 IQAKLGCCLIELLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATR 335 >NP_001289533.1 DNA-directed RNA polymerase 3, chloroplastic [Nicotiana sylvestris] P69242.1 RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName: Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 3; Flags: Precursor P69243.1 RecName: Full=DNA-directed RNA polymerase 3A, chloroplastic; AltName: Full=NictaRpoT3-syl; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 3A; Flags: Precursor CAC82576.3 phage-type RNA polymerase [Nicotiana sylvestris] CAC95027.2 plastid RNA polymerase [Nicotiana tabacum] BAC22693.1 T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] BAC22694.1 T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] Length = 977 Score = 383 bits (984), Expect = e-120 Identities = 218/392 (55%), Positives = 267/392 (68%), Gaps = 7/392 (1%) Frame = -3 Query: 1157 AEMASLSPTPKAQLHSSWRPKIRKLNQNSNTHSHLLFISTPISQRFLTNPSLCSSSFPYN 978 A AS SP+P +Q WR + KL + N + I + + SL +SSFP Sbjct: 2 ASTASYSPSPTSQ----WRTQ--KLPKRFNFY----VIHNQEFGKLSQSSSLPTSSFPKT 51 Query: 977 LKLPSLSNPISIHLHPLSD---STDENLTENREDLANLQTITIGLNQIPPQSTQRIFIQD 807 LKLP + PI+ ++ + STDENL E+L NLQ I G+ + +S +R+FIQD Sbjct: 52 LKLPVIQMPINNNIQSQTTVCVSTDENL----EELVNLQKIANGV--LTKESNKRVFIQD 105 Query: 806 PPWINSLFMRNLYNRTKQ--RVKIEFKEIERRKYY-LLRRRQIKAETEAWENMVEEYREL 636 PPW++SLFM +L+ R KQ V+ EF+EIERR+ Y +LRRRQIKAETEAWE MVEEYREL Sbjct: 106 PPWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYREL 165 Query: 635 EKEMCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQTRKHKAAYSPHIDCLPADKMA 456 E+EMCEKKLAPNLPYVKKL LGWFEPLR+AI KEQ ++ T KH+AA++PHID LPADKMA Sbjct: 166 EREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMA 225 Query: 455 VIVMHKMMALLMM-GQEGRCXXXXXXXXXXXXXXXQEVRIHSFLEKTKKYHKGKIVTQAQ 279 VIVMHK+M LLMM G+E RC EVRIH+FLEKTKK K Q+Q Sbjct: 226 VIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQSQ 285 Query: 278 EDLSKETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRDTQAKLGCRLIELLTETAYV 99 ED+S+ET V+KL+ +EE +SWGRDTQAKLGCRL+ELLTETAYV Sbjct: 286 EDMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETAYV 345 Query: 98 QPPIDQSADAPPDIRPAFRHKFKIVAKDARQS 3 QPP+DQSAD PPDIRPAFRH F+I +D +S Sbjct: 346 QPPVDQSADTPPDIRPAFRHVFRIATRDPGKS 377 >XP_015580378.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 3, chloroplastic [Ricinus communis] Length = 994 Score = 381 bits (978), Expect = e-119 Identities = 202/382 (52%), Positives = 251/382 (65%), Gaps = 12/382 (3%) Frame = -3 Query: 1115 HSSWRPKIRKLNQNSNTHSHLLFISTPISQRFLTNPSLCSSSFPYNLKLPSLSNPISIHL 936 + +W K K+ + H +L F+S P S TN SL SSSFP K P P Sbjct: 9 YQNWPTKPPKITKTQKNHKNLHFLSVPTSHSLFTN-SLSSSSFPLITKFPRNLLPF---- 63 Query: 935 HPLSDSTDENLTE--------NREDLANLQTITIGLNQ----IPPQSTQRIFIQDPPWIN 792 HPL D+ +E+L E N + L L + + N +P +S++R+FIQDPPWI+ Sbjct: 64 HPLHDAVEEHLLEDLVENPIGNHQKLETLIKLDLPTNHNHQVLPEESSRRVFIQDPPWIS 123 Query: 791 SLFMRNLYNRTKQRVKIEFKEIERRKYYLLRRRQIKAETEAWENMVEEYRELEKEMCEKK 612 +LF + LY + VK+EFK+IE+RKY LLRRRQI+ ETEAWE MVEEY+ L KEMCE+K Sbjct: 124 ALFFKGLYKIPNKEVKLEFKDIEKRKYNLLRRRQIREETEAWERMVEEYKALVKEMCERK 183 Query: 611 LAPNLPYVKKLFLGWFEPLREAIAKEQKSQQTRKHKAAYSPHIDCLPADKMAVIVMHKMM 432 LAPNLPYVK LFLGWFEPL+E I EQ Q+++K+KAA++PHI+ LPADKMAVIVMHKM+ Sbjct: 184 LAPNLPYVKGLFLGWFEPLKEGIKSEQNLQRSKKNKAAFAPHIELLPADKMAVIVMHKMV 243 Query: 431 ALLMMGQEGRCXXXXXXXXXXXXXXXQEVRIHSFLEKTKKYHKGKIVTQAQEDLSKETXX 252 LLM+G E C QEVRIH+FLEKTK Y + K ++ AQE L KE Sbjct: 244 GLLMVGHEDGCVPLVQAAVQIGMAIEQEVRIHNFLEKTKNYQRKKTISGAQESLGKEKEI 303 Query: 251 XXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRDTQAKLGCRLIELLTETAYVQPPIDQSAD 72 VQKLV NEE+K WGRDTQAKLG RLIELLTETA+VQPP++QSAD Sbjct: 304 LRKRVNSLIRRKKLIEVQKLVKNEEMKPWGRDTQAKLGSRLIELLTETAFVQPPVNQSAD 363 Query: 71 APPDIRPAFRHKFKIVAKDARQ 6 PPD+RPAFRH+F+IV + Q Sbjct: 364 VPPDVRPAFRHRFRIVKNNPGQ 385 >EEF33998.1 DNA-directed RNA polymerase 3B, chloroplast precursor, putative [Ricinus communis] Length = 1000 Score = 381 bits (978), Expect = e-119 Identities = 202/382 (52%), Positives = 251/382 (65%), Gaps = 12/382 (3%) Frame = -3 Query: 1115 HSSWRPKIRKLNQNSNTHSHLLFISTPISQRFLTNPSLCSSSFPYNLKLPSLSNPISIHL 936 + +W K K+ + H +L F+S P S TN SL SSSFP K P P Sbjct: 9 YQNWPTKPPKITKTQKNHKNLHFLSVPTSHSLFTN-SLSSSSFPLITKFPRNLLPF---- 63 Query: 935 HPLSDSTDENLTE--------NREDLANLQTITIGLNQ----IPPQSTQRIFIQDPPWIN 792 HPL D+ +E+L E N + L L + + N +P +S++R+FIQDPPWI+ Sbjct: 64 HPLHDAVEEHLLEDLVENPIGNHQKLETLIKLDLPTNHNHQVLPEESSRRVFIQDPPWIS 123 Query: 791 SLFMRNLYNRTKQRVKIEFKEIERRKYYLLRRRQIKAETEAWENMVEEYRELEKEMCEKK 612 +LF + LY + VK+EFK+IE+RKY LLRRRQI+ ETEAWE MVEEY+ L KEMCE+K Sbjct: 124 ALFFKGLYKIPNKEVKLEFKDIEKRKYNLLRRRQIREETEAWERMVEEYKALVKEMCERK 183 Query: 611 LAPNLPYVKKLFLGWFEPLREAIAKEQKSQQTRKHKAAYSPHIDCLPADKMAVIVMHKMM 432 LAPNLPYVK LFLGWFEPL+E I EQ Q+++K+KAA++PHI+ LPADKMAVIVMHKM+ Sbjct: 184 LAPNLPYVKGLFLGWFEPLKEGIKSEQNLQRSKKNKAAFAPHIELLPADKMAVIVMHKMV 243 Query: 431 ALLMMGQEGRCXXXXXXXXXXXXXXXQEVRIHSFLEKTKKYHKGKIVTQAQEDLSKETXX 252 LLM+G E C QEVRIH+FLEKTK Y + K ++ AQE L KE Sbjct: 244 GLLMVGHEDGCVPLVQAAVQIGMAIEQEVRIHNFLEKTKNYQRKKTISGAQESLGKEKEI 303 Query: 251 XXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRDTQAKLGCRLIELLTETAYVQPPIDQSAD 72 VQKLV NEE+K WGRDTQAKLG RLIELLTETA+VQPP++QSAD Sbjct: 304 LRKRVNSLIRRKKLIEVQKLVKNEEMKPWGRDTQAKLGSRLIELLTETAFVQPPVNQSAD 363 Query: 71 APPDIRPAFRHKFKIVAKDARQ 6 PPD+RPAFRH+F+IV + Q Sbjct: 364 VPPDVRPAFRHRFRIVKNNPGQ 385 >ONH98785.1 hypothetical protein PRUPE_7G266200 [Prunus persica] Length = 946 Score = 379 bits (973), Expect = e-119 Identities = 217/387 (56%), Positives = 253/387 (65%), Gaps = 3/387 (0%) Frame = -3 Query: 1157 AEMASLSPTPKAQLH--SSWRPKIRKLNQNSNTHSHLLFISTPISQRFLTNPSLCSSSFP 984 A AS SP+P+AQ + SS K KLN LF ST S F + S S+ FP Sbjct: 2 ASTASFSPSPQAQTYTCSSRWSKAPKLNHK------FLFSSTSNSLFFKPSHS-SSTHFP 54 Query: 983 YNLKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQTITIGLNQIPPQ-STQRIFIQD 807 NLK P P +H+ PL DS +N+ EN N Q + I PQ S RIFIQD Sbjct: 55 LNLKPP----PEPVHIPPLRDSIQDNIVENS---MNFQIPMSEFHLITPQESAPRIFIQD 107 Query: 806 PPWINSLFMRNLYNRTKQRVKIEFKEIERRKYYLLRRRQIKAETEAWENMVEEYRELEKE 627 PPWI SLF++ +Y R Q +K+E KEIERR Y +LRRRQIKAETEAWE MV+EY++LEK Sbjct: 108 PPWIASLFLKGIYKRANQELKLESKEIERRNYNVLRRRQIKAETEAWERMVDEYKDLEKV 167 Query: 626 MCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQTRKHKAAYSPHIDCLPADKMAVIV 447 M EKKLAPNLPYVK LFLGWFEPLREAIA+EQK+QQT+KHKAA++PHID LPADKMA+IV Sbjct: 168 MREKKLAPNLPYVKALFLGWFEPLREAIAREQKTQQTKKHKAAFAPHIDLLPADKMALIV 227 Query: 446 MHKMMALLMMGQEGRCXXXXXXXXXXXXXXXQEVRIHSFLEKTKKYHKGKIVTQAQEDLS 267 MHKMM L+M+G + C QEVRIHSFLEKTK K K ++ LS Sbjct: 228 MHKMMGLVMVGNQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADEDGLS 287 Query: 266 KETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRDTQAKLGCRLIELLTETAYVQPPI 87 KE VQKL+ EE+K WGRD QAKLG RLIELLTETAYVQPP+ Sbjct: 288 KEKEILRKRVNGLIRRKRLNEVQKLLIKEEMKPWGRDKQAKLGSRLIELLTETAYVQPPL 347 Query: 86 DQSADAPPDIRPAFRHKFKIVAKDARQ 6 Q AD+PPD+RPAFRH+FK VAK Q Sbjct: 348 SQLADSPPDVRPAFRHRFKAVAKSPGQ 374 >XP_017250907.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Daucus carota subsp. sativus] Length = 978 Score = 380 bits (975), Expect = e-119 Identities = 205/340 (60%), Positives = 237/340 (69%), Gaps = 14/340 (4%) Frame = -3 Query: 980 NLKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQ-------------TITIGLNQIP 840 NL LS+P S HPLS T +R +ANL+ T+T + P Sbjct: 40 NLATLVLSSP-SPRAHPLSPWRPIIFTSHRISIANLKFRPKLSPFTSRVSTVTYDPSTHP 98 Query: 839 PQS-TQRIFIQDPPWINSLFMRNLYNRTKQRVKIEFKEIERRKYYLLRRRQIKAETEAWE 663 + QR+F+QDPPWI + MRNLYN VK++ KE+ERRKYY LRRRQ+KAETEAWE Sbjct: 99 EEDENQRVFVQDPPWITNFVMRNLYNEDNGNVKVDAKEMERRKYYRLRRRQVKAETEAWE 158 Query: 662 NMVEEYRELEKEMCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQTRKHKAAYSPHI 483 +MVEEYRELE+EMC+KKLAPNLPYVK+LFLGWFEPLR+AI KEQKSQ++RKHKAAY+P I Sbjct: 159 SMVEEYRELEREMCDKKLAPNLPYVKQLFLGWFEPLRDAILKEQKSQKSRKHKAAYAPCI 218 Query: 482 DCLPADKMAVIVMHKMMALLMMGQEGRCXXXXXXXXXXXXXXXQEVRIHSFLEKTKKYHK 303 DCLPADK+AVIVMHKMMALLM G+EGR QEVRIHSFL+KTKK Sbjct: 219 DCLPADKIAVIVMHKMMALLMTGREGRFVRVVQAAVQIGVAIEQEVRIHSFLDKTKKSKT 278 Query: 302 GKIVTQAQEDLSKETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRDTQAKLGCRLIE 123 GKI+T +ED S ET V+K+V NE+ KSWGRD QAKLGCRLIE Sbjct: 279 GKILTTDEEDASIETEVLRKRVKTLMKKRRTNEVRKIVKNEDFKSWGRDKQAKLGCRLIE 338 Query: 122 LLTETAYVQPPIDQSADAPPDIRPAFRHKFKIVAKDARQS 3 LLTETA+VQPPI QS DAPPDIRPAFRH F+IV KD QS Sbjct: 339 LLTETAWVQPPISQSVDAPPDIRPAFRHTFRIVPKDPGQS 378 >XP_007203225.1 hypothetical protein PRUPE_ppa000868mg [Prunus persica] ONH98784.1 hypothetical protein PRUPE_7G266200 [Prunus persica] Length = 976 Score = 379 bits (973), Expect = e-119 Identities = 217/387 (56%), Positives = 253/387 (65%), Gaps = 3/387 (0%) Frame = -3 Query: 1157 AEMASLSPTPKAQLH--SSWRPKIRKLNQNSNTHSHLLFISTPISQRFLTNPSLCSSSFP 984 A AS SP+P+AQ + SS K KLN LF ST S F + S S+ FP Sbjct: 2 ASTASFSPSPQAQTYTCSSRWSKAPKLNHK------FLFSSTSNSLFFKPSHS-SSTHFP 54 Query: 983 YNLKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQTITIGLNQIPPQ-STQRIFIQD 807 NLK P P +H+ PL DS +N+ EN N Q + I PQ S RIFIQD Sbjct: 55 LNLKPP----PEPVHIPPLRDSIQDNIVENS---MNFQIPMSEFHLITPQESAPRIFIQD 107 Query: 806 PPWINSLFMRNLYNRTKQRVKIEFKEIERRKYYLLRRRQIKAETEAWENMVEEYRELEKE 627 PPWI SLF++ +Y R Q +K+E KEIERR Y +LRRRQIKAETEAWE MV+EY++LEK Sbjct: 108 PPWIASLFLKGIYKRANQELKLESKEIERRNYNVLRRRQIKAETEAWERMVDEYKDLEKV 167 Query: 626 MCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQTRKHKAAYSPHIDCLPADKMAVIV 447 M EKKLAPNLPYVK LFLGWFEPLREAIA+EQK+QQT+KHKAA++PHID LPADKMA+IV Sbjct: 168 MREKKLAPNLPYVKALFLGWFEPLREAIAREQKTQQTKKHKAAFAPHIDLLPADKMALIV 227 Query: 446 MHKMMALLMMGQEGRCXXXXXXXXXXXXXXXQEVRIHSFLEKTKKYHKGKIVTQAQEDLS 267 MHKMM L+M+G + C QEVRIHSFLEKTK K K ++ LS Sbjct: 228 MHKMMGLVMVGNQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADEDGLS 287 Query: 266 KETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRDTQAKLGCRLIELLTETAYVQPPI 87 KE VQKL+ EE+K WGRD QAKLG RLIELLTETAYVQPP+ Sbjct: 288 KEKEILRKRVNGLIRRKRLNEVQKLLIKEEMKPWGRDKQAKLGSRLIELLTETAYVQPPL 347 Query: 86 DQSADAPPDIRPAFRHKFKIVAKDARQ 6 Q AD+PPD+RPAFRH+FK VAK Q Sbjct: 348 SQLADSPPDVRPAFRHRFKAVAKSPGQ 374 >XP_016459970.1 PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic, partial [Nicotiana tabacum] Length = 988 Score = 379 bits (973), Expect = e-119 Identities = 219/397 (55%), Positives = 264/397 (66%), Gaps = 6/397 (1%) Frame = -3 Query: 1187 PPSCQKRQSFAEMASLSPTPKAQLHSSWRPKIRKLNQNSNTHSHLLFISTPISQRFLTNP 1008 PP + A AS SP+P +Q WR + KL + N + I + + Sbjct: 3 PPPPKPSLKLASTASYSPSPTSQ----WRTQ--KLPKRFNFY----VIHNQEFGKLSQSS 52 Query: 1007 SLCSSSFPYNLKLPSLSNPISI--HLHPLSDSTDENLTENREDLANLQTITIGLNQIPPQ 834 SL +SSFP LKLP + PI+ + STDENL E+L NLQ I G + + Sbjct: 53 SLSTSSFPKTLKLPVIHMPINNIQSQTTVCVSTDENL----EELVNLQKIPNGF--LNKE 106 Query: 833 STQRIFIQDPPWINSLFMRNLYNRTKQ--RVKIEFKEIERRKYY-LLRRRQIKAETEAWE 663 S +R+FIQDPPW++SLFM +L+ R KQ V+ EF+EIERR+ Y +LRRRQIKAETEAWE Sbjct: 107 SNKRVFIQDPPWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWE 166 Query: 662 NMVEEYRELEKEMCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQTRKHKAAYSPHI 483 MVEEYRELE+EMCEKKLAPNLPYVKKL LGWFEPLR+AI KEQ ++ T KH+AA++PHI Sbjct: 167 QMVEEYRELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHI 226 Query: 482 DCLPADKMAVIVMHKMMALLMM-GQEGRCXXXXXXXXXXXXXXXQEVRIHSFLEKTKKYH 306 D LPADKMAVIVMHK+M LLMM G+E RC EVRIH+FLEKTKK Sbjct: 227 DSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQ 286 Query: 305 KGKIVTQAQEDLSKETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRDTQAKLGCRLI 126 K Q+QED+S+ET V+KL+ +EE +SWGRDTQAKLGCRL+ Sbjct: 287 KHMTGAQSQEDMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLL 346 Query: 125 ELLTETAYVQPPIDQSADAPPDIRPAFRHKFKIVAKD 15 ELLTETAYVQ P+DQSAD PPDIRPAFRH FKI +D Sbjct: 347 ELLTETAYVQRPVDQSADTPPDIRPAFRHVFKIATRD 383 >GAV88805.1 RNA_pol domain-containing protein [Cephalotus follicularis] Length = 981 Score = 379 bits (972), Expect = e-119 Identities = 213/387 (55%), Positives = 253/387 (65%), Gaps = 3/387 (0%) Frame = -3 Query: 1157 AEMASLSPTPKAQLHSSWRPKIRKLNQNSNTHSHLLFISTP-ISQRFLTNPSLCSSSFPY 981 A ASLS T + + + + +PK N + + +L F+ST +S T S CS SFP Sbjct: 2 ASTASLSATSQLRFYRTKQPKP---NNHHKPYKNLHFLSTSSLSTIATTLSSTCSFSFPL 58 Query: 980 NLKLPSLSNPISIHLHPLSDSTDENLTENREDLANLQTITIGLNQIPPQSTQRIFIQDPP 801 N+K S P +H PL DS DEN E IG +Q QS RIFIQDPP Sbjct: 59 NVK----STPTMLHFLPLQDSVDENFVE------------IG-HQEESQSPTRIFIQDPP 101 Query: 800 WINSLFMRNLYNRTKQRVKIEFKEIERRKYYLLRRRQIKAETEAWENMVEEYRELEKEMC 621 WI+SLF++ LY RT QRVK+E+KEIE+RKY +LRRRQ+K ETEAWE V EYRELE+EMC Sbjct: 102 WISSLFLKGLYKRTLQRVKLEYKEIEKRKYNVLRRRQVKEETEAWERTVSEYRELEREMC 161 Query: 620 EKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQ--QTRKHKAAYSPHIDCLPADKMAVIV 447 EKKLAPNLPYVK LFLGWFEPL EAI KEQ+ Q ++++H+AAY+PHI+ LPADKMA+IV Sbjct: 162 EKKLAPNLPYVKALFLGWFEPLTEAIEKEQRVQRGKSQRHRAAYAPHIELLPADKMAIIV 221 Query: 446 MHKMMALLMMGQEGRCXXXXXXXXXXXXXXXQEVRIHSFLEKTKKYHKGKIVTQAQEDLS 267 MHKMM L+M E C QE+RIHSFLEKTK Y KI + AQE L Sbjct: 222 MHKMMGLVMAAHEDGCVQVVQAAVHIGTAIEQEIRIHSFLEKTKSYRTKKIESDAQETLR 281 Query: 266 KETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRDTQAKLGCRLIELLTETAYVQPPI 87 KE VQKLV EEI+ W RDTQAKLG RLIELLTETAYVQPPI Sbjct: 282 KEKELLRKRVNSLIRRKKLVEVQKLVKFEEIEPWSRDTQAKLGSRLIELLTETAYVQPPI 341 Query: 86 DQSADAPPDIRPAFRHKFKIVAKDARQ 6 +QSAD+PPD+RPAFRH FK ++ Q Sbjct: 342 NQSADSPPDVRPAFRHIFKAATRNLGQ 368 >NP_001312292.1 DNA-directed RNA polymerase 3B, chloroplastic [Nicotiana tabacum] Q8L6J1.2 RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName: Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 3B; Flags: Precursor CAC95021.2 chloroplast RNA polymerase [Nicotiana tabacum] Length = 977 Score = 377 bits (969), Expect = e-118 Identities = 218/387 (56%), Positives = 261/387 (67%), Gaps = 6/387 (1%) Frame = -3 Query: 1157 AEMASLSPTPKAQLHSSWRPKIRKLNQNSNTHSHLLFISTPISQRFLTNPSLCSSSFPYN 978 A AS SP+P +Q WR + KL + N + I + + SL +SSFP Sbjct: 2 ASTASYSPSPTSQ----WRTQ--KLPKRFNFY----VIHNQEFGKLSQSSSLSTSSFPKT 51 Query: 977 LKLPSLSNPISI--HLHPLSDSTDENLTENREDLANLQTITIGLNQIPPQSTQRIFIQDP 804 LKLP + PI+ + STDENL E+L NLQ I G + +S +R+FIQDP Sbjct: 52 LKLPVIHMPINNIQSQTTVCVSTDENL----EELVNLQKIPNGF--LNKESNKRVFIQDP 105 Query: 803 PWINSLFMRNLYNRTKQ--RVKIEFKEIERRKYY-LLRRRQIKAETEAWENMVEEYRELE 633 PW++SLFM +L+ R KQ V+ EF+EIERR+ Y +LRRRQIKAETEAWE MVEEYRELE Sbjct: 106 PWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELE 165 Query: 632 KEMCEKKLAPNLPYVKKLFLGWFEPLREAIAKEQKSQQTRKHKAAYSPHIDCLPADKMAV 453 +EMCEKKLAPNLPYVKKL LGWFEPLR+AI KEQ ++ T KH+AA++PHID LPADKMAV Sbjct: 166 REMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMAV 225 Query: 452 IVMHKMMALLMM-GQEGRCXXXXXXXXXXXXXXXQEVRIHSFLEKTKKYHKGKIVTQAQE 276 IVMHK+M LLMM G+E RC EVRIH+FLEKTKK K Q+QE Sbjct: 226 IVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQSQE 285 Query: 275 DLSKETXXXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRDTQAKLGCRLIELLTETAYVQ 96 D+SKET V+KL+ +EE +SWGRDTQAKLGCRL+ELLTETAYVQ Sbjct: 286 DMSKETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETAYVQ 345 Query: 95 PPIDQSADAPPDIRPAFRHKFKIVAKD 15 P+DQSAD PPDIRPAFRH FKI +D Sbjct: 346 RPVDQSADTPPDIRPAFRHVFKIATRD 372 >EOY31498.1 DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao] Length = 927 Score = 371 bits (953), Expect = e-116 Identities = 209/380 (55%), Positives = 249/380 (65%), Gaps = 3/380 (0%) Frame = -3 Query: 1145 SLSPTPKAQLHSSWRPKIRKLNQNSNTHSHLLFISTPISQRFLTNPSLCSSSFPYNLKLP 966 SL+ TP+ Q + +P + + LLF+ P +PSL S FP NL P Sbjct: 8 SLTQTPQIQYPTRRKPPLPQKPHKKP----LLFLPKPT-----LHPSLVSFPFPLNLNSP 58 Query: 965 SLSNPISIHLHPLSDSTDENLTENREDLANLQTITIGLNQI-PPQSTQRIFIQDPPWINS 789 P PL DS +N EN E+ +N +QI P+ST R+FIQDPPWI++ Sbjct: 59 ----PNPARFCPLHDSLHDNFVENIENPSNFLLPKAQSHQILSPESTPRLFIQDPPWISA 114 Query: 788 LFMRNLYNRTKQRVKIEFKEIERRKYYLLRRRQIKAETEAWENMVEEYRELEKEMCEKKL 609 LF++ LY T Q VKIE KEIE+RKY LLRRRQ+K ETEAWE MVEEYREL++EMCEKKL Sbjct: 115 LFLKGLYKMTNQTVKIEHKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKL 174 Query: 608 APNLPYVKKLFLGWFEPLREAIAKEQKSQ--QTRKHKAAYSPHIDCLPADKMAVIVMHKM 435 APNLPYVK LFLGWFEP+REAIA+EQK Q +++K +AAY+PHI+ LPADKMAVIVMHKM Sbjct: 175 APNLPYVKGLFLGWFEPMREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKM 234 Query: 434 MALLMMGQEGRCXXXXXXXXXXXXXXXQEVRIHSFLEKTKKYHKGKIVTQAQEDLSKETX 255 M L+M QE QEVRIH+FLEKTK Y + K + Q LSKE Sbjct: 235 MGLVMGAQENGFVQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDEVQ-GLSKEKE 293 Query: 254 XXXXXXXXXXXXXXXXXVQKLVNNEEIKSWGRDTQAKLGCRLIELLTETAYVQPPIDQSA 75 VQKLV NEEIK WGRD QAKLG RL+ELLTETAYVQPPIDQS Sbjct: 294 ILKKRVNSLIRRRRLVEVQKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSG 353 Query: 74 DAPPDIRPAFRHKFKIVAKD 15 D+PPD++PAFRHKFK ++KD Sbjct: 354 DSPPDVQPAFRHKFKTISKD 373