BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00017076
         (2375 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM94452.1 hypothetical protein DCAR_017695 [Daucus carota subsp...   500   e-166
XP_017254083.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   500   e-165
ONI03024.1 hypothetical protein PRUPE_6G234100 [Prunus persica]       447   e-145
XP_008243975.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   445   e-144
ONI03022.1 hypothetical protein PRUPE_6G234100 [Prunus persica]       444   e-144
CBI32760.3 unnamed protein product, partial [Vitis vinifera]          440   e-142
XP_010653602.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   440   e-142
ONI03025.1 hypothetical protein PRUPE_6G234100 [Prunus persica]       435   e-142
XP_018858063.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   440   e-142
XP_018858062.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   440   e-142
XP_007204994.1 hypothetical protein PRUPE_ppa003513mg [Prunus pe...   439   e-142
XP_019077288.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   433   e-139
XP_010241846.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   429   e-139
KJB36542.1 hypothetical protein B456_006G165200 [Gossypium raimo...   426   e-138
XP_010241845.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   429   e-138
GAV75806.1 Sigma70_r3 domain-containing protein/Sigma70_r2 domai...   429   e-138
XP_010241844.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   429   e-138
XP_012485939.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   426   e-138
XP_010241843.1 PREDICTED: RNA polymerase sigma factor sigF, chlo...   429   e-138
KJB36540.1 hypothetical protein B456_006G165200 [Gossypium raimo...   426   e-138

>KZM94452.1 hypothetical protein DCAR_017695 [Daucus carota subsp. sativus]
          Length = 558

 Score =  500 bits (1287), Expect = e-166
 Identities = 259/349 (74%), Positives = 291/349 (83%), Gaps = 4/349 (1%)
 Frame = +2

Query: 5    PSLQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEAD 184
            PS Q G +PS + + Q   +  K+  GVEPCDV+ LAK AL ASK AV LAEDHK   A+
Sbjct: 118  PSSQTGSMPSSTFSDQCGGAINKST-GVEPCDVLALAKEALQASKKAVLLAEDHKPSGAN 176

Query: 185  LDESLAPSLGSTTPV----EQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQR 352
            L+ES   SLGS T      EQ R VRSTR LER+SKKRR P+++ + Q+    KR +  R
Sbjct: 177  LEESRTISLGSMTSAGFSGEQARTVRSTRRLERQSKKRRYPEKREMFQD----KRVNHPR 232

Query: 353  SKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPTL 532
            SKSKASD DDPLRLF+WVPETK+LLTAKEESELIVHIQEL+RLEEVKGRLH QFGREPTL
Sbjct: 233  SKSKASDSDDPLRLFTWVPETKKLLTAKEESELIVHIQELMRLEEVKGRLHAQFGREPTL 292

Query: 533  VEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSMG 712
            VEWA+AV L+ RALKSQ+HC N SREKLIYANFRLVVHIAKQ+ GRGLNLQDLLQEGSMG
Sbjct: 293  VEWADAVGLTCRALKSQMHCSNKSREKLIYANFRLVVHIAKQFNGRGLNLQDLLQEGSMG 352

Query: 713  LMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQCI 892
            LMWS++KFKPQAGCRFATYA+WWIRQ++RK+IFQHSRTIRLPDSVYGLLYKVTEAKRQCI
Sbjct: 353  LMWSIKKFKPQAGCRFATYAYWWIRQSIRKSIFQHSRTIRLPDSVYGLLYKVTEAKRQCI 412

Query: 893  QEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            QEGHH PTKEQIAAR GITVDKL+RLL   RTPLSM+Q VW +QNTT+Q
Sbjct: 413  QEGHHRPTKEQIAARCGITVDKLQRLLCVVRTPLSMEQAVWAEQNTTYQ 461


>XP_017254083.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Daucus
            carota subsp. sativus]
          Length = 567

 Score =  500 bits (1287), Expect = e-165
 Identities = 259/349 (74%), Positives = 291/349 (83%), Gaps = 4/349 (1%)
 Frame = +2

Query: 5    PSLQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEAD 184
            PS Q G +PS + + Q   +  K+  GVEPCDV+ LAK AL ASK AV LAEDHK   A+
Sbjct: 127  PSSQTGSMPSSTFSDQCGGAINKST-GVEPCDVLALAKEALQASKKAVLLAEDHKPSGAN 185

Query: 185  LDESLAPSLGSTTPV----EQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQR 352
            L+ES   SLGS T      EQ R VRSTR LER+SKKRR P+++ + Q+    KR +  R
Sbjct: 186  LEESRTISLGSMTSAGFSGEQARTVRSTRRLERQSKKRRYPEKREMFQD----KRVNHPR 241

Query: 353  SKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPTL 532
            SKSKASD DDPLRLF+WVPETK+LLTAKEESELIVHIQEL+RLEEVKGRLH QFGREPTL
Sbjct: 242  SKSKASDSDDPLRLFTWVPETKKLLTAKEESELIVHIQELMRLEEVKGRLHAQFGREPTL 301

Query: 533  VEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSMG 712
            VEWA+AV L+ RALKSQ+HC N SREKLIYANFRLVVHIAKQ+ GRGLNLQDLLQEGSMG
Sbjct: 302  VEWADAVGLTCRALKSQMHCSNKSREKLIYANFRLVVHIAKQFNGRGLNLQDLLQEGSMG 361

Query: 713  LMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQCI 892
            LMWS++KFKPQAGCRFATYA+WWIRQ++RK+IFQHSRTIRLPDSVYGLLYKVTEAKRQCI
Sbjct: 362  LMWSIKKFKPQAGCRFATYAYWWIRQSIRKSIFQHSRTIRLPDSVYGLLYKVTEAKRQCI 421

Query: 893  QEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            QEGHH PTKEQIAAR GITVDKL+RLL   RTPLSM+Q VW +QNTT+Q
Sbjct: 422  QEGHHRPTKEQIAARCGITVDKLQRLLCVVRTPLSMEQAVWAEQNTTYQ 470


>ONI03024.1 hypothetical protein PRUPE_6G234100 [Prunus persica]
          Length = 573

 Score =  447 bits (1149), Expect = e-145
 Identities = 231/351 (65%), Positives = 277/351 (78%), Gaps = 7/351 (1%)
 Frame = +2

Query: 8    SLQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEADL 187
            SLQ G  PS   T +SL + +   M VEPC+VV LAK ALSAS+ A SLAED +S  AD 
Sbjct: 128  SLQTGAKPSTPLTLESLTTASNKHMDVEPCNVVALAKKALSASREAASLAEDSQSMGADF 187

Query: 188  DESLAPSLGSTTP----VEQERIVRSTRLLERRSKK---RRVPKQKVLVQETSSSKRADL 346
            DESL+  LG T+     VE+E+ VRSTR+LERR K+   R+VPK KV+  E++S   +D+
Sbjct: 188  DESLSLGLGYTSLANWIVEEEKTVRSTRILERRRKRIKTRKVPKSKVIGHESNSFTGSDV 247

Query: 347  QRSKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREP 526
            ++  S+  +P+DPLRLF W PET+QLLTAKEE+ELI  +Q+L +LEEVK RL  QFGREP
Sbjct: 248  RKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEEVKSRLQTQFGREP 307

Query: 527  TLVEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGS 706
            TL+EWAEAV +S + LKSQL    +SREKLIYAN R+VVHIAKQYQGRGL LQDL+QEGS
Sbjct: 308  TLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGS 367

Query: 707  MGLMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQ 886
            MGLM SV+KFKPQAGCRFATYA+WWIRQ VRKAIFQHSRTIRLP++VY LL KV EAK+ 
Sbjct: 368  MGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKS 427

Query: 887  CIQEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            CIQEG+H P KE++A R GITV+KLE+LLY+ R PLSMQQPVW DQ+TTFQ
Sbjct: 428  CIQEGNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQPVWADQDTTFQ 478


>XP_008243975.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Prunus
            mume]
          Length = 573

 Score =  445 bits (1145), Expect = e-144
 Identities = 230/351 (65%), Positives = 276/351 (78%), Gaps = 7/351 (1%)
 Frame = +2

Query: 8    SLQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEADL 187
            SLQ G  PS   T +SL + +   M VEPC+VV LAK ALSAS+ A SLAED +S  AD 
Sbjct: 128  SLQTGAKPSTPVTLESLTTASNKHMDVEPCNVVALAKKALSASREAASLAEDSQSMGADF 187

Query: 188  DESLAPSLGSTTP----VEQERIVRSTRLLERRSKK---RRVPKQKVLVQETSSSKRADL 346
            DESL+  LG T+     VE+E+ VRSTR+LERR K+   R+VPK K++  E++S   +D+
Sbjct: 188  DESLSLGLGYTSLDNWIVEEEKTVRSTRILERRRKRIKTRKVPKSKLIGHESNSFTSSDV 247

Query: 347  QRSKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREP 526
             +  S+  +P+DPLRLF W PET+QLLTAKEE+ELI  +Q+L +LEEVK RL  QFGREP
Sbjct: 248  PKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEEVKSRLQTQFGREP 307

Query: 527  TLVEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGS 706
            TL+EWAEAV +S + LKSQL    +SREKLIYAN R+VVHIAKQYQGRGL LQDL+QEGS
Sbjct: 308  TLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGS 367

Query: 707  MGLMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQ 886
            MGLM SV+KFKPQAGCRFATYA+WWIRQ VRKAIFQHSRTIRLP++VY LL KV EAK+ 
Sbjct: 368  MGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKS 427

Query: 887  CIQEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            CIQEG+H P KE++A R GITV+KLE+LLY+ R PLSMQQPVW DQ+TTFQ
Sbjct: 428  CIQEGNHNPNKEELAIRVGITVEKLEKLLYATRMPLSMQQPVWADQDTTFQ 478


>ONI03022.1 hypothetical protein PRUPE_6G234100 [Prunus persica]
          Length = 568

 Score =  444 bits (1143), Expect = e-144
 Identities = 229/347 (65%), Positives = 275/347 (79%), Gaps = 3/347 (0%)
 Frame = +2

Query: 8    SLQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEADL 187
            SLQ G  PS   T +SL + +   M VEPC+VV LAK ALSAS+ A SLAED +S  AD 
Sbjct: 128  SLQTGAKPSTPLTLESLTTASNKHMDVEPCNVVALAKKALSASREAASLAEDSQSMGADF 187

Query: 188  DESLAPSLGSTTPVEQERIVRSTRLLERRSKK---RRVPKQKVLVQETSSSKRADLQRSK 358
            DESL+  L +   VE+E+ VRSTR+LERR K+   R+VPK KV+  E++S   +D+++  
Sbjct: 188  DESLSLGLANWI-VEEEKTVRSTRILERRRKRIKTRKVPKSKVIGHESNSFTGSDVRKKI 246

Query: 359  SKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPTLVE 538
            S+  +P+DPLRLF W PET+QLLTAKEE+ELI  +Q+L +LEEVK RL  QFGREPTL+E
Sbjct: 247  SEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEEVKSRLQTQFGREPTLIE 306

Query: 539  WAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSMGLM 718
            WAEAV +S + LKSQL    +SREKLIYAN R+VVHIAKQYQGRGL LQDL+QEGSMGLM
Sbjct: 307  WAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGSMGLM 366

Query: 719  WSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQCIQE 898
             SV+KFKPQAGCRFATYA+WWIRQ VRKAIFQHSRTIRLP++VY LL KV EAK+ CIQE
Sbjct: 367  KSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKSCIQE 426

Query: 899  GHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            G+H P KE++A R GITV+KLE+LLY+ R PLSMQQPVW DQ+TTFQ
Sbjct: 427  GNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQPVWADQDTTFQ 473


>CBI32760.3 unnamed protein product, partial [Vitis vinifera]
          Length = 561

 Score =  440 bits (1132), Expect = e-142
 Identities = 237/350 (67%), Positives = 276/350 (78%), Gaps = 5/350 (1%)
 Frame = +2

Query: 5    PSLQMG-RIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEA 181
            PS Q G + P  SS  +S+ +  +  M V+PCDV+ LAK ALSASK AVSL E+ K   A
Sbjct: 120  PSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQAVSLYENAKLLGA 179

Query: 182  DLDESLAPSLGSTT----PVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQ 349
            DL++S +PSLG+ +    P+E E+ VRSTRLLERRSKKRR PK  V V E   S+RA++Q
Sbjct: 180  DLEDSPSPSLGAISSPNLPLE-EKTVRSTRLLERRSKKRRNPK--VAVHENHGSRRAEVQ 236

Query: 350  RSKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPT 529
            R  ++  DP DPLRLF W PET++LLTAKEESELIV IQEL+RLEEVK RL     REPT
Sbjct: 237  RKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVKKRLQSHLKREPT 296

Query: 530  LVEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSM 709
            +VEWAEAV LS + L+SQLH  N SR+KLIYAN R+VVHIAKQYQGRGLNLQDLLQEGSM
Sbjct: 297  VVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQEGSM 356

Query: 710  GLMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQC 889
            GLM SV+KFKP AGCRFA+YA+WWIRQAVRKAIFQHSRTIRLP+++Y LL KV EAKR  
Sbjct: 357  GLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLF 416

Query: 890  IQEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            IQEGHH PTKE+IA R GIT++KL+RLL   R PLSMQQPVW DQ+TTFQ
Sbjct: 417  IQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQ 466


>XP_010653602.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Vitis vinifera]
          Length = 567

 Score =  440 bits (1132), Expect = e-142
 Identities = 237/350 (67%), Positives = 276/350 (78%), Gaps = 5/350 (1%)
 Frame = +2

Query: 5    PSLQMG-RIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEA 181
            PS Q G + P  SS  +S+ +  +  M V+PCDV+ LAK ALSASK AVSL E+ K   A
Sbjct: 126  PSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQAVSLYENAKLLGA 185

Query: 182  DLDESLAPSLGSTT----PVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQ 349
            DL++S +PSLG+ +    P+E E+ VRSTRLLERRSKKRR PK  V V E   S+RA++Q
Sbjct: 186  DLEDSPSPSLGAISSPNLPLE-EKTVRSTRLLERRSKKRRNPK--VAVHENHGSRRAEVQ 242

Query: 350  RSKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPT 529
            R  ++  DP DPLRLF W PET++LLTAKEESELIV IQEL+RLEEVK RL     REPT
Sbjct: 243  RKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVKKRLQSHLKREPT 302

Query: 530  LVEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSM 709
            +VEWAEAV LS + L+SQLH  N SR+KLIYAN R+VVHIAKQYQGRGLNLQDLLQEGSM
Sbjct: 303  VVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQEGSM 362

Query: 710  GLMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQC 889
            GLM SV+KFKP AGCRFA+YA+WWIRQAVRKAIFQHSRTIRLP+++Y LL KV EAKR  
Sbjct: 363  GLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLF 422

Query: 890  IQEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            IQEGHH PTKE+IA R GIT++KL+RLL   R PLSMQQPVW DQ+TTFQ
Sbjct: 423  IQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQ 472


>ONI03025.1 hypothetical protein PRUPE_6G234100 [Prunus persica]
          Length = 422

 Score =  435 bits (1118), Expect = e-142
 Identities = 222/327 (67%), Positives = 265/327 (81%), Gaps = 7/327 (2%)
 Frame = +2

Query: 80   MGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEADLDESLAPSLGSTTP----VEQERIV 247
            M VEPC+VV LAK ALSAS+ A SLAED +S  AD DESL+  LG T+     VE+E+ V
Sbjct: 1    MDVEPCNVVALAKKALSASREAASLAEDSQSMGADFDESLSLGLGYTSLANWIVEEEKTV 60

Query: 248  RSTRLLERRSKK---RRVPKQKVLVQETSSSKRADLQRSKSKASDPDDPLRLFSWVPETK 418
            RSTR+LERR K+   R+VPK KV+  E++S   +D+++  S+  +P+DPLRLF W PET+
Sbjct: 61   RSTRILERRRKRIKTRKVPKSKVIGHESNSFTGSDVRKKISEGFNPNDPLRLFLWGPETR 120

Query: 419  QLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPTLVEWAEAVALSFRALKSQLHCRN 598
            QLLTAKEE+ELI  +Q+L +LEEVK RL  QFGREPTL+EWAEAV +S + LKSQL    
Sbjct: 121  QLLTAKEEAELIARVQDLFKLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGT 180

Query: 599  NSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSMGLMWSVQKFKPQAGCRFATYAFW 778
            +SREKLIYAN R+VVHIAKQYQGRGL LQDL+QEGSMGLM SV+KFKPQAGCRFATYA+W
Sbjct: 181  SSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYW 240

Query: 779  WIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQCIQEGHHCPTKEQIAARAGITVDK 958
            WIRQ VRKAIFQHSRTIRLP++VY LL KV EAK+ CIQEG+H P KE++A R GITV+K
Sbjct: 241  WIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKSCIQEGNHNPNKEELARRVGITVEK 300

Query: 959  LERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            LE+LLY+ R PLSMQQPVW DQ+TTFQ
Sbjct: 301  LEKLLYATRMPLSMQQPVWADQDTTFQ 327


>XP_018858063.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Juglans regia]
          Length = 570

 Score =  440 bits (1132), Expect = e-142
 Identities = 225/350 (64%), Positives = 275/350 (78%), Gaps = 4/350 (1%)
 Frame = +2

Query: 2    SPSLQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEA 181
            SP LQ G+  S S + Q + + T+  M VE CD+V LAK ALSAS+ A  LAED K   +
Sbjct: 128  SPPLQTGKTMSSSLSMQPIPASTENPMDVEECDIVALAKKALSASQEAALLAEDSKLIGS 187

Query: 182  DLDESLAPSLGS----TTPVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQ 349
            D DESL+   GS      P+E+E++VRSTR+LERRSKKRRVPK  V   E  SS+  D++
Sbjct: 188  DFDESLSSGFGSRIFVNIPLEEEKVVRSTRILERRSKKRRVPKSNV--HENHSSRNVDVK 245

Query: 350  RSKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPT 529
            R  S+  DP+DPLRLF W PETKQLLT +EESELI  +Q+L++LEEVK RL   FGREPT
Sbjct: 246  RKISEGFDPNDPLRLFLWGPETKQLLTFEEESELIAQVQDLLKLEEVKIRLQSHFGREPT 305

Query: 530  LVEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSM 709
            LVEWAE V LS+RALKS+L+  N+SREKLIYAN R+VVH+AK Y GRGL+ QDLLQEGSM
Sbjct: 306  LVEWAEGVGLSYRALKSRLYSGNSSREKLIYANLRMVVHVAKLYPGRGLSFQDLLQEGSM 365

Query: 710  GLMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQC 889
            GLM SV+KFKPQ+GCRFATYA+WWIRQ++RKAI+QHSRTIRLP++V+ LL K+ E+KR  
Sbjct: 366  GLMKSVEKFKPQSGCRFATYAYWWIRQSIRKAIYQHSRTIRLPENVHALLGKMMESKRLL 425

Query: 890  IQEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            IQEG+H PTKE++A   GITV+KLE+LLY+ R PLSMQ+PVWTDQ+TTFQ
Sbjct: 426  IQEGNHHPTKEELARHVGITVNKLEKLLYTTRLPLSMQRPVWTDQDTTFQ 475


>XP_018858062.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Juglans regia]
          Length = 575

 Score =  440 bits (1132), Expect = e-142
 Identities = 225/350 (64%), Positives = 275/350 (78%), Gaps = 4/350 (1%)
 Frame = +2

Query: 2    SPSLQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEA 181
            SP LQ G+  S S + Q + + T+  M VE CD+V LAK ALSAS+ A  LAED K   +
Sbjct: 133  SPPLQTGKTMSSSLSMQPIPASTENPMDVEECDIVALAKKALSASQEAALLAEDSKLIGS 192

Query: 182  DLDESLAPSLGS----TTPVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQ 349
            D DESL+   GS      P+E+E++VRSTR+LERRSKKRRVPK  V   E  SS+  D++
Sbjct: 193  DFDESLSSGFGSRIFVNIPLEEEKVVRSTRILERRSKKRRVPKSNV--HENHSSRNVDVK 250

Query: 350  RSKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPT 529
            R  S+  DP+DPLRLF W PETKQLLT +EESELI  +Q+L++LEEVK RL   FGREPT
Sbjct: 251  RKISEGFDPNDPLRLFLWGPETKQLLTFEEESELIAQVQDLLKLEEVKIRLQSHFGREPT 310

Query: 530  LVEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSM 709
            LVEWAE V LS+RALKS+L+  N+SREKLIYAN R+VVH+AK Y GRGL+ QDLLQEGSM
Sbjct: 311  LVEWAEGVGLSYRALKSRLYSGNSSREKLIYANLRMVVHVAKLYPGRGLSFQDLLQEGSM 370

Query: 710  GLMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQC 889
            GLM SV+KFKPQ+GCRFATYA+WWIRQ++RKAI+QHSRTIRLP++V+ LL K+ E+KR  
Sbjct: 371  GLMKSVEKFKPQSGCRFATYAYWWIRQSIRKAIYQHSRTIRLPENVHALLGKMMESKRLL 430

Query: 890  IQEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            IQEG+H PTKE++A   GITV+KLE+LLY+ R PLSMQ+PVWTDQ+TTFQ
Sbjct: 431  IQEGNHHPTKEELARHVGITVNKLEKLLYTTRLPLSMQRPVWTDQDTTFQ 480


>XP_007204994.1 hypothetical protein PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score =  439 bits (1129), Expect = e-142
 Identities = 227/347 (65%), Positives = 273/347 (78%), Gaps = 3/347 (0%)
 Frame = +2

Query: 8    SLQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEADL 187
            SLQ G  PS   T +SL + +   M VEPC+VV LAK ALSAS+ A SLAED +S  AD 
Sbjct: 128  SLQTGAKPSTPLTLESLTTASNKHMDVEPCNVVALAKKALSASREAASLAEDSQSMGADF 187

Query: 188  DESLAPSLGSTTPVEQERIVRSTRLLERRSKK---RRVPKQKVLVQETSSSKRADLQRSK 358
            D+    SL +   VE+E+ VRSTR+LERR K+   R+VPK KV+  E++S   +D+++  
Sbjct: 188  DDLGYTSLANWI-VEEEKTVRSTRILERRRKRIKTRKVPKSKVIGHESNSFTGSDVRKKI 246

Query: 359  SKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPTLVE 538
            S+  +P+DPLRLF W PET+QLLTAKEE+ELI  +Q+L +LEEVK RL  QFGREPTL+E
Sbjct: 247  SEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEEVKSRLQTQFGREPTLIE 306

Query: 539  WAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSMGLM 718
            WAEAV +S + LKSQL    +SREKLIYAN R+VVHIAKQYQGRGL LQDL+QEGSMGLM
Sbjct: 307  WAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGSMGLM 366

Query: 719  WSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQCIQE 898
             SV+KFKPQAGCRFATYA+WWIRQ VRKAIFQHSRTIRLP++VY LL KV EAK+ CIQE
Sbjct: 367  KSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKSCIQE 426

Query: 899  GHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            G+H P KE++A R GITV+KLE+LLY+ R PLSMQQPVW DQ+TTFQ
Sbjct: 427  GNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQPVWADQDTTFQ 473


>XP_019077288.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Vitis vinifera]
          Length = 566

 Score =  433 bits (1113), Expect = e-139
 Identities = 236/350 (67%), Positives = 275/350 (78%), Gaps = 5/350 (1%)
 Frame = +2

Query: 5    PSLQMG-RIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEA 181
            PS Q G + P  SS  +S+ +  +  M V+PCDV+ LAK ALSASK AVSL E+ K   A
Sbjct: 126  PSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQAVSLYENAKLLGA 185

Query: 182  DLDESLAPSLGSTT----PVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQ 349
            DL++S + SLG+ +    P+E E+ VRSTRLLERRSKKRR PK  V V E   S+RA++Q
Sbjct: 186  DLEDSPS-SLGAISSPNLPLE-EKTVRSTRLLERRSKKRRNPK--VAVHENHGSRRAEVQ 241

Query: 350  RSKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPT 529
            R  ++  DP DPLRLF W PET++LLTAKEESELIV IQEL+RLEEVK RL     REPT
Sbjct: 242  RKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVKKRLQSHLKREPT 301

Query: 530  LVEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSM 709
            +VEWAEAV LS + L+SQLH  N SR+KLIYAN R+VVHIAKQYQGRGLNLQDLLQEGSM
Sbjct: 302  VVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQEGSM 361

Query: 710  GLMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQC 889
            GLM SV+KFKP AGCRFA+YA+WWIRQAVRKAIFQHSRTIRLP+++Y LL KV EAKR  
Sbjct: 362  GLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLF 421

Query: 890  IQEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            IQEGHH PTKE+IA R GIT++KL+RLL   R PLSMQQPVW DQ+TTFQ
Sbjct: 422  IQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQ 471


>XP_010241846.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X4
            [Nelumbo nucifera]
          Length = 525

 Score =  429 bits (1103), Expect = e-139
 Identities = 222/350 (63%), Positives = 271/350 (77%), Gaps = 5/350 (1%)
 Frame = +2

Query: 5    PSLQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEAD 184
            PSL  G  P LS   QS A+ T   + V PCD + LAK A+ ASK A SLA+D++ F AD
Sbjct: 82   PSLYKGEKPLLSMVTQSTAAGTVKNVDVRPCDALELAKKAVLASKQAASLAKDYELFGAD 141

Query: 185  LDESLAP-----SLGSTTPVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQ 349
              ES  P     +L +  P+ +E  VRS RLLER+SK+R +P+ KV+V E S+S+++D+ 
Sbjct: 142  SHESFLPDLEPRNLANKIPLREEVAVRSKRLLERQSKRRWIPRPKVVVSEASTSRKSDIH 201

Query: 350  RSKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPT 529
            +   +  D +DPLRLF W PETKQLLT KEESEL VH+QELIRLEEVK RL  QF REPT
Sbjct: 202  KKIHEGFDTNDPLRLFLWGPETKQLLTPKEESELFVHVQELIRLEEVKQRLQSQFDREPT 261

Query: 530  LVEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSM 709
            LVEWAEAV ++ ++L+S LH  N+SREK+IYANFRLVVH+AK YQG+GLNLQDLLQEGSM
Sbjct: 262  LVEWAEAVGMTCQSLQSILHSGNSSREKIIYANFRLVVHVAKHYQGQGLNLQDLLQEGSM 321

Query: 710  GLMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQC 889
            GLM S++KFKPQAGCRFATYA+WWIRQA+RKAIFQ+SRTIRLP++VY LL +V +AK+  
Sbjct: 322  GLMKSLEKFKPQAGCRFATYAYWWIRQAIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLF 381

Query: 890  IQEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            IQEGHH PT E++A R GITV+KLERL  S R PLS+QQPVW DQ+TTFQ
Sbjct: 382  IQEGHH-PTNEELAKRVGITVEKLERLFMSTRMPLSIQQPVWADQDTTFQ 430


>KJB36542.1 hypothetical protein B456_006G165200 [Gossypium raimondii]
          Length = 454

 Score =  426 bits (1095), Expect = e-138
 Identities = 220/349 (63%), Positives = 277/349 (79%), Gaps = 6/349 (1%)
 Frame = +2

Query: 11   LQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEADLD 190
            L++G  PS S   QS+A+ T+  M VEP  ++ LAK ALSASK A++LAED K    DLD
Sbjct: 15   LELGENPSSSLNMQSVAADTEETMNVEPSTILALAKNALSASKQALALAEDLK---LDLD 71

Query: 191  ESLAPSLGS----TTPVEQERI--VRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQR 352
            +SL+ SLGS    T PVE+E    VRSTR LER+SK+RR+P  K ++ +T S ++ ++++
Sbjct: 72   DSLSNSLGSANSSTLPVEEEEAPTVRSTRRLERQSKRRRMPS-KFMISDTYSLRKTNVRK 130

Query: 353  SKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPTL 532
              S + DP+DPLRLF   PET QLLTAKEESELIV +Q+L+RLE++K  L  QFGREPTL
Sbjct: 131  KVSGSYDPNDPLRLFLRGPETTQLLTAKEESELIVEVQDLMRLEKLKSNLQSQFGREPTL 190

Query: 533  VEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSMG 712
            VEWAEA+ LS  AL+++LH  N SREKL+YANFR+V H+AKQYQGRG+NLQDLLQEGSMG
Sbjct: 191  VEWAEAIGLSCSALQAELHNGNRSREKLVYANFRMVFHVAKQYQGRGMNLQDLLQEGSMG 250

Query: 713  LMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQCI 892
            L+ SV+KFKPQ GCRFATY++WWIRQ + K+I QHSRTIRLP++ Y LL KV +AKR  I
Sbjct: 251  LIKSVEKFKPQVGCRFATYSYWWIRQTITKSIVQHSRTIRLPENAYSLLGKVVKAKRSYI 310

Query: 893  QEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            QEG+HCP+KE++A RAGITV KL++LL++ RTPLSMQQPVWTDQ+TTFQ
Sbjct: 311  QEGNHCPSKEELATRAGITVQKLDKLLFTTRTPLSMQQPVWTDQDTTFQ 359


>XP_010241845.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X3
            [Nelumbo nucifera]
          Length = 540

 Score =  429 bits (1103), Expect = e-138
 Identities = 222/350 (63%), Positives = 271/350 (77%), Gaps = 5/350 (1%)
 Frame = +2

Query: 5    PSLQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEAD 184
            PSL  G  P LS   QS A+ T   + V PCD + LAK A+ ASK A SLA+D++ F AD
Sbjct: 97   PSLYKGEKPLLSMVTQSTAAGTVKNVDVRPCDALELAKKAVLASKQAASLAKDYELFGAD 156

Query: 185  LDESLAP-----SLGSTTPVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQ 349
              ES  P     +L +  P+ +E  VRS RLLER+SK+R +P+ KV+V E S+S+++D+ 
Sbjct: 157  SHESFLPDLEPRNLANKIPLREEVAVRSKRLLERQSKRRWIPRPKVVVSEASTSRKSDIH 216

Query: 350  RSKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPT 529
            +   +  D +DPLRLF W PETKQLLT KEESEL VH+QELIRLEEVK RL  QF REPT
Sbjct: 217  KKIHEGFDTNDPLRLFLWGPETKQLLTPKEESELFVHVQELIRLEEVKQRLQSQFDREPT 276

Query: 530  LVEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSM 709
            LVEWAEAV ++ ++L+S LH  N+SREK+IYANFRLVVH+AK YQG+GLNLQDLLQEGSM
Sbjct: 277  LVEWAEAVGMTCQSLQSILHSGNSSREKIIYANFRLVVHVAKHYQGQGLNLQDLLQEGSM 336

Query: 710  GLMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQC 889
            GLM S++KFKPQAGCRFATYA+WWIRQA+RKAIFQ+SRTIRLP++VY LL +V +AK+  
Sbjct: 337  GLMKSLEKFKPQAGCRFATYAYWWIRQAIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLF 396

Query: 890  IQEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            IQEGHH PT E++A R GITV+KLERL  S R PLS+QQPVW DQ+TTFQ
Sbjct: 397  IQEGHH-PTNEELAKRVGITVEKLERLFMSTRMPLSIQQPVWADQDTTFQ 445


>GAV75806.1 Sigma70_r3 domain-containing protein/Sigma70_r2 domain-containing
            protein/Sigma70_r4 domain-containing protein [Cephalotus
            follicularis]
          Length = 564

 Score =  429 bits (1104), Expect = e-138
 Identities = 226/352 (64%), Positives = 272/352 (77%), Gaps = 6/352 (1%)
 Frame = +2

Query: 2    SPSLQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKS--F 175
            SPS Q    PS   T QS+ + ++ LM VEP D ++LA+ ALSASK A SLA+D KS   
Sbjct: 119  SPS-QTSEDPSSLLTTQSVVTDSQPLMDVEPSDAISLAERALSASKLAASLAQDTKSGTI 177

Query: 176  EADLDESLAPSLGSTT----PVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRAD 343
            EAD+D  L+ S GS +    P+E+ +IVRSTR+LER SK+R +PK  V+V E S S+RAD
Sbjct: 178  EADIDYPLSTSSGSNSSSNFPIEEVKIVRSTRVLERWSKRRNIPKPNVIVHEMSISRRAD 237

Query: 344  LQRSKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGRE 523
            ++R   +  DP+DPLRLF W PET QLL+ KEESELIV IQ L++LEEVK RL  QFGRE
Sbjct: 238  VKRKLKEGFDPNDPLRLFLWGPETTQLLSFKEESELIVQIQNLLKLEEVKSRLQSQFGRE 297

Query: 524  PTLVEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEG 703
            PTL+EWAEAV +S + L+SQLH  N SREKLI AN R+VVHIAKQYQGRGL+LQDL+QEG
Sbjct: 298  PTLIEWAEAVGMSHQVLRSQLHSGNRSREKLINANLRMVVHIAKQYQGRGLSLQDLMQEG 357

Query: 704  SMGLMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKR 883
            SMGLM SV+KFKPQAGCRFA+YA+WWIRQ VRKAIFQHS+TIRLP+  Y LL KV EAK+
Sbjct: 358  SMGLMKSVKKFKPQAGCRFASYAYWWIRQMVRKAIFQHSKTIRLPERFYSLLGKVMEAKK 417

Query: 884  QCIQEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
              IQEG+H P+ E++A R GITVDKL++L+ S R PLSMQQPVW DQ TT Q
Sbjct: 418  SYIQEGNHHPSIEELAGRVGITVDKLQKLILSTRNPLSMQQPVWADQKTTLQ 469


>XP_010241844.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Nelumbo nucifera]
          Length = 565

 Score =  429 bits (1103), Expect = e-138
 Identities = 222/350 (63%), Positives = 271/350 (77%), Gaps = 5/350 (1%)
 Frame = +2

Query: 5    PSLQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEAD 184
            PSL  G  P LS   QS A+ T   + V PCD + LAK A+ ASK A SLA+D++ F AD
Sbjct: 122  PSLYKGEKPLLSMVTQSTAAGTVKNVDVRPCDALELAKKAVLASKQAASLAKDYELFGAD 181

Query: 185  LDESLAP-----SLGSTTPVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQ 349
              ES  P     +L +  P+ +E  VRS RLLER+SK+R +P+ KV+V E S+S+++D+ 
Sbjct: 182  SHESFLPDLEPRNLANKIPLREEVAVRSKRLLERQSKRRWIPRPKVVVSEASTSRKSDIH 241

Query: 350  RSKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPT 529
            +   +  D +DPLRLF W PETKQLLT KEESEL VH+QELIRLEEVK RL  QF REPT
Sbjct: 242  KKIHEGFDTNDPLRLFLWGPETKQLLTPKEESELFVHVQELIRLEEVKQRLQSQFDREPT 301

Query: 530  LVEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSM 709
            LVEWAEAV ++ ++L+S LH  N+SREK+IYANFRLVVH+AK YQG+GLNLQDLLQEGSM
Sbjct: 302  LVEWAEAVGMTCQSLQSILHSGNSSREKIIYANFRLVVHVAKHYQGQGLNLQDLLQEGSM 361

Query: 710  GLMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQC 889
            GLM S++KFKPQAGCRFATYA+WWIRQA+RKAIFQ+SRTIRLP++VY LL +V +AK+  
Sbjct: 362  GLMKSLEKFKPQAGCRFATYAYWWIRQAIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLF 421

Query: 890  IQEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            IQEGHH PT E++A R GITV+KLERL  S R PLS+QQPVW DQ+TTFQ
Sbjct: 422  IQEGHH-PTNEELAKRVGITVEKLERLFMSTRMPLSIQQPVWADQDTTFQ 470


>XP_012485939.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X3 [Gossypium raimondii]
          Length = 482

 Score =  426 bits (1095), Expect = e-138
 Identities = 220/349 (63%), Positives = 277/349 (79%), Gaps = 6/349 (1%)
 Frame = +2

Query: 11   LQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEADLD 190
            L++G  PS S   QS+A+ T+  M VEP  ++ LAK ALSASK A++LAED K    DLD
Sbjct: 43   LELGENPSSSLNMQSVAADTEETMNVEPSTILALAKNALSASKQALALAEDLK---LDLD 99

Query: 191  ESLAPSLGS----TTPVEQERI--VRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQR 352
            +SL+ SLGS    T PVE+E    VRSTR LER+SK+RR+P  K ++ +T S ++ ++++
Sbjct: 100  DSLSNSLGSANSSTLPVEEEEAPTVRSTRRLERQSKRRRMPS-KFMISDTYSLRKTNVRK 158

Query: 353  SKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPTL 532
              S + DP+DPLRLF   PET QLLTAKEESELIV +Q+L+RLE++K  L  QFGREPTL
Sbjct: 159  KVSGSYDPNDPLRLFLRGPETTQLLTAKEESELIVEVQDLMRLEKLKSNLQSQFGREPTL 218

Query: 533  VEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSMG 712
            VEWAEA+ LS  AL+++LH  N SREKL+YANFR+V H+AKQYQGRG+NLQDLLQEGSMG
Sbjct: 219  VEWAEAIGLSCSALQAELHNGNRSREKLVYANFRMVFHVAKQYQGRGMNLQDLLQEGSMG 278

Query: 713  LMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQCI 892
            L+ SV+KFKPQ GCRFATY++WWIRQ + K+I QHSRTIRLP++ Y LL KV +AKR  I
Sbjct: 279  LIKSVEKFKPQVGCRFATYSYWWIRQTITKSIVQHSRTIRLPENAYSLLGKVVKAKRSYI 338

Query: 893  QEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            QEG+HCP+KE++A RAGITV KL++LL++ RTPLSMQQPVWTDQ+TTFQ
Sbjct: 339  QEGNHCPSKEELATRAGITVQKLDKLLFTTRTPLSMQQPVWTDQDTTFQ 387


>XP_010241843.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Nelumbo nucifera]
          Length = 568

 Score =  429 bits (1103), Expect = e-138
 Identities = 222/350 (63%), Positives = 271/350 (77%), Gaps = 5/350 (1%)
 Frame = +2

Query: 5    PSLQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEAD 184
            PSL  G  P LS   QS A+ T   + V PCD + LAK A+ ASK A SLA+D++ F AD
Sbjct: 125  PSLYKGEKPLLSMVTQSTAAGTVKNVDVRPCDALELAKKAVLASKQAASLAKDYELFGAD 184

Query: 185  LDESLAP-----SLGSTTPVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQ 349
              ES  P     +L +  P+ +E  VRS RLLER+SK+R +P+ KV+V E S+S+++D+ 
Sbjct: 185  SHESFLPDLEPRNLANKIPLREEVAVRSKRLLERQSKRRWIPRPKVVVSEASTSRKSDIH 244

Query: 350  RSKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPT 529
            +   +  D +DPLRLF W PETKQLLT KEESEL VH+QELIRLEEVK RL  QF REPT
Sbjct: 245  KKIHEGFDTNDPLRLFLWGPETKQLLTPKEESELFVHVQELIRLEEVKQRLQSQFDREPT 304

Query: 530  LVEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSM 709
            LVEWAEAV ++ ++L+S LH  N+SREK+IYANFRLVVH+AK YQG+GLNLQDLLQEGSM
Sbjct: 305  LVEWAEAVGMTCQSLQSILHSGNSSREKIIYANFRLVVHVAKHYQGQGLNLQDLLQEGSM 364

Query: 710  GLMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQC 889
            GLM S++KFKPQAGCRFATYA+WWIRQA+RKAIFQ+SRTIRLP++VY LL +V +AK+  
Sbjct: 365  GLMKSLEKFKPQAGCRFATYAYWWIRQAIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLF 424

Query: 890  IQEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            IQEGHH PT E++A R GITV+KLERL  S R PLS+QQPVW DQ+TTFQ
Sbjct: 425  IQEGHH-PTNEELAKRVGITVEKLERLFMSTRMPLSIQQPVWADQDTTFQ 473


>KJB36540.1 hypothetical protein B456_006G165200 [Gossypium raimondii]
          Length = 507

 Score =  426 bits (1095), Expect = e-138
 Identities = 220/349 (63%), Positives = 277/349 (79%), Gaps = 6/349 (1%)
 Frame = +2

Query: 11   LQMGRIPSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEADLD 190
            L++G  PS S   QS+A+ T+  M VEP  ++ LAK ALSASK A++LAED K    DLD
Sbjct: 68   LELGENPSSSLNMQSVAADTEETMNVEPSTILALAKNALSASKQALALAEDLK---LDLD 124

Query: 191  ESLAPSLGS----TTPVEQERI--VRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQR 352
            +SL+ SLGS    T PVE+E    VRSTR LER+SK+RR+P  K ++ +T S ++ ++++
Sbjct: 125  DSLSNSLGSANSSTLPVEEEEAPTVRSTRRLERQSKRRRMPS-KFMISDTYSLRKTNVRK 183

Query: 353  SKSKASDPDDPLRLFSWVPETKQLLTAKEESELIVHIQELIRLEEVKGRLHVQFGREPTL 532
              S + DP+DPLRLF   PET QLLTAKEESELIV +Q+L+RLE++K  L  QFGREPTL
Sbjct: 184  KVSGSYDPNDPLRLFLRGPETTQLLTAKEESELIVEVQDLMRLEKLKSNLQSQFGREPTL 243

Query: 533  VEWAEAVALSFRALKSQLHCRNNSREKLIYANFRLVVHIAKQYQGRGLNLQDLLQEGSMG 712
            VEWAEA+ LS  AL+++LH  N SREKL+YANFR+V H+AKQYQGRG+NLQDLLQEGSMG
Sbjct: 244  VEWAEAIGLSCSALQAELHNGNRSREKLVYANFRMVFHVAKQYQGRGMNLQDLLQEGSMG 303

Query: 713  LMWSVQKFKPQAGCRFATYAFWWIRQAVRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQCI 892
            L+ SV+KFKPQ GCRFATY++WWIRQ + K+I QHSRTIRLP++ Y LL KV +AKR  I
Sbjct: 304  LIKSVEKFKPQVGCRFATYSYWWIRQTITKSIVQHSRTIRLPENAYSLLGKVVKAKRSYI 363

Query: 893  QEGHHCPTKEQIAARAGITVDKLERLLYSARTPLSMQQPVWTDQNTTFQ 1039
            QEG+HCP+KE++A RAGITV KL++LL++ RTPLSMQQPVWTDQ+TTFQ
Sbjct: 364  QEGNHCPSKEELATRAGITVQKLDKLLFTTRTPLSMQQPVWTDQDTTFQ 412