BLASTX nr result
ID: Panax25_contig00017075
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00017075
(390 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZM94452.1 hypothetical protein DCAR_017695 [Daucus carota subsp... 204 1e-60
XP_017254083.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 204 1e-60
KJB62408.1 hypothetical protein B456_009G415400 [Gossypium raimo... 170 5e-49
XP_017612735.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 172 1e-48
XP_016738386.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 172 1e-48
XP_016738385.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 172 1e-48
XP_017612734.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 172 1e-48
XP_016738383.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 172 1e-48
XP_016738382.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 172 1e-48
CBI32760.3 unnamed protein product, partial [Vitis vinifera] 171 4e-48
XP_019077288.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 171 4e-48
XP_010653602.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 171 4e-48
XP_007027376.2 PREDICTED: RNA polymerase sigma factor sigF, chlo... 171 6e-48
EOY07878.1 RNA polymerase sigma factor rpoD, putative [Theobroma... 171 6e-48
XP_012443174.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 170 8e-48
XP_012443173.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 170 8e-48
XP_012443172.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 170 8e-48
AKC88770.1 sigma factor [Francoa sonchifolia] 170 8e-48
XP_012443171.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 170 8e-48
XP_010241846.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 169 2e-47
>KZM94452.1 hypothetical protein DCAR_017695 [Daucus carota subsp. sativus]
Length = 558
Score = 204 bits (518), Expect = 1e-60
Identities = 102/125 (81%), Positives = 109/125 (87%)
Frame = +2
Query: 14 QETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRLEEVK 193
+E KR + R KSKAS DD LRLF+WVPETKKLLTAKEESELIVHIQELMRLEEVK
Sbjct: 220 REMFQDKRVNHPRSKSKASDSDDPLRLFTWVPETKKLLTAKEESELIVHIQELMRLEEVK 279
Query: 194 GRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQYLGRG 373
GRLH QFGREPT+VEWA+A GLTCRALKSQ+ CSN SREKLIYANFRLVVHIAKQ+ GRG
Sbjct: 280 GRLHAQFGREPTLVEWADAVGLTCRALKSQMHCSNKSREKLIYANFRLVVHIAKQFNGRG 339
Query: 374 LNLQD 388
LNLQD
Sbjct: 340 LNLQD 344
>XP_017254083.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Daucus
carota subsp. sativus]
Length = 567
Score = 204 bits (518), Expect = 1e-60
Identities = 102/125 (81%), Positives = 109/125 (87%)
Frame = +2
Query: 14 QETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRLEEVK 193
+E KR + R KSKAS DD LRLF+WVPETKKLLTAKEESELIVHIQELMRLEEVK
Sbjct: 229 REMFQDKRVNHPRSKSKASDSDDPLRLFTWVPETKKLLTAKEESELIVHIQELMRLEEVK 288
Query: 194 GRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQYLGRG 373
GRLH QFGREPT+VEWA+A GLTCRALKSQ+ CSN SREKLIYANFRLVVHIAKQ+ GRG
Sbjct: 289 GRLHAQFGREPTLVEWADAVGLTCRALKSQMHCSNKSREKLIYANFRLVVHIAKQFNGRG 348
Query: 374 LNLQD 388
LNLQD
Sbjct: 349 LNLQD 353
>KJB62408.1 hypothetical protein B456_009G415400 [Gossypium raimondii]
Length = 413
Score = 170 bits (431), Expect = 5e-49
Identities = 83/129 (64%), Positives = 104/129 (80%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV++ ET SS+R D+RR+ SK S P+D LRLF W PETK+LLTA+EES LI+ +Q+L RL
Sbjct: 227 KVVICETYSSRRKDVRRKSSKGSDPNDPLRLFLWGPETKQLLTAEEESVLIIQVQDLKRL 286
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
+ K +L QFGREPT+VEWAEA GL+C AL+++LQ SREKLI+AN R+VVHIAKQY
Sbjct: 287 VKEKSKLQSQFGREPTLVEWAEAMGLSCSALQAELQSGKRSREKLIHANLRMVVHIAKQY 346
Query: 362 LGRGLNLQD 388
GRGL+LQD
Sbjct: 347 QGRGLSLQD 355
>XP_017612735.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Gossypium arboreum]
Length = 565
Score = 172 bits (437), Expect = 1e-48
Identities = 83/129 (64%), Positives = 106/129 (82%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV++ ET SS+R D+RR+ S+ S P+D LRLF W PETK+LLTA+EES+LI+ +Q+L RL
Sbjct: 225 KVVICETYSSQRKDVRRKSSEGSDPNDPLRLFLWGPETKQLLTAEEESDLIIQVQDLKRL 284
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
+VK +L QFGREPT+VEWAEA GL+C AL+++LQ SREKLI+AN R+VVHIAKQY
Sbjct: 285 AKVKSKLQSQFGREPTLVEWAEAMGLSCSALQAELQSGKRSREKLIHANLRMVVHIAKQY 344
Query: 362 LGRGLNLQD 388
GRGL+LQD
Sbjct: 345 QGRGLSLQD 353
>XP_016738386.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X4 [Gossypium hirsutum]
Length = 565
Score = 172 bits (437), Expect = 1e-48
Identities = 83/129 (64%), Positives = 106/129 (82%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV++ ET SS+R D+RR+ S+ S P+D LRLF W PETK+LLTA+EES+LI+ +Q+L RL
Sbjct: 225 KVVICETYSSQRKDVRRKSSEGSDPNDPLRLFLWGPETKQLLTAEEESDLIIQVQDLKRL 284
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
+VK +L QFGREPT+VEWAEA GL+C AL+++LQ SREKLI+AN R+VVHIAKQY
Sbjct: 285 AKVKSKLQSQFGREPTLVEWAEAMGLSCSALQAELQSGKRSREKLIHANLRMVVHIAKQY 344
Query: 362 LGRGLNLQD 388
GRGL+LQD
Sbjct: 345 QGRGLSLQD 353
>XP_016738385.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X3 [Gossypium hirsutum]
Length = 567
Score = 172 bits (437), Expect = 1e-48
Identities = 83/129 (64%), Positives = 106/129 (82%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV++ ET SS+R D+RR+ S+ S P+D LRLF W PETK+LLTA+EES+LI+ +Q+L RL
Sbjct: 227 KVVICETYSSQRKDVRRKSSEGSDPNDPLRLFLWGPETKQLLTAEEESDLIIQVQDLKRL 286
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
+VK +L QFGREPT+VEWAEA GL+C AL+++LQ SREKLI+AN R+VVHIAKQY
Sbjct: 287 AKVKSKLQSQFGREPTLVEWAEAMGLSCSALQAELQSGKRSREKLIHANLRMVVHIAKQY 346
Query: 362 LGRGLNLQD 388
GRGL+LQD
Sbjct: 347 QGRGLSLQD 355
>XP_017612734.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Gossypium arboreum] KHG05515.1 RNA
polymerase sigma factor rpoD [Gossypium arboreum]
Length = 567
Score = 172 bits (437), Expect = 1e-48
Identities = 83/129 (64%), Positives = 106/129 (82%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV++ ET SS+R D+RR+ S+ S P+D LRLF W PETK+LLTA+EES+LI+ +Q+L RL
Sbjct: 227 KVVICETYSSQRKDVRRKSSEGSDPNDPLRLFLWGPETKQLLTAEEESDLIIQVQDLKRL 286
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
+VK +L QFGREPT+VEWAEA GL+C AL+++LQ SREKLI+AN R+VVHIAKQY
Sbjct: 287 AKVKSKLQSQFGREPTLVEWAEAMGLSCSALQAELQSGKRSREKLIHANLRMVVHIAKQY 346
Query: 362 LGRGLNLQD 388
GRGL+LQD
Sbjct: 347 QGRGLSLQD 355
>XP_016738383.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Gossypium hirsutum]
Length = 570
Score = 172 bits (437), Expect = 1e-48
Identities = 83/129 (64%), Positives = 106/129 (82%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV++ ET SS+R D+RR+ S+ S P+D LRLF W PETK+LLTA+EES+LI+ +Q+L RL
Sbjct: 230 KVVICETYSSQRKDVRRKSSEGSDPNDPLRLFLWGPETKQLLTAEEESDLIIQVQDLKRL 289
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
+VK +L QFGREPT+VEWAEA GL+C AL+++LQ SREKLI+AN R+VVHIAKQY
Sbjct: 290 AKVKSKLQSQFGREPTLVEWAEAMGLSCSALQAELQSGKRSREKLIHANLRMVVHIAKQY 349
Query: 362 LGRGLNLQD 388
GRGL+LQD
Sbjct: 350 QGRGLSLQD 358
>XP_016738382.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Gossypium hirsutum]
Length = 572
Score = 172 bits (437), Expect = 1e-48
Identities = 83/129 (64%), Positives = 106/129 (82%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV++ ET SS+R D+RR+ S+ S P+D LRLF W PETK+LLTA+EES+LI+ +Q+L RL
Sbjct: 232 KVVICETYSSQRKDVRRKSSEGSDPNDPLRLFLWGPETKQLLTAEEESDLIIQVQDLKRL 291
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
+VK +L QFGREPT+VEWAEA GL+C AL+++LQ SREKLI+AN R+VVHIAKQY
Sbjct: 292 AKVKSKLQSQFGREPTLVEWAEAMGLSCSALQAELQSGKRSREKLIHANLRMVVHIAKQY 351
Query: 362 LGRGLNLQD 388
GRGL+LQD
Sbjct: 352 QGRGLSLQD 360
>CBI32760.3 unnamed protein product, partial [Vitis vinifera]
Length = 561
Score = 171 bits (433), Expect = 4e-48
Identities = 87/129 (67%), Positives = 101/129 (78%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV V E S+RA+++R+ ++ P D LRLF W PET+KLLTAKEESELIV IQELMRL
Sbjct: 221 KVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRL 280
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
EEVK RL REPT+VEWAEA GL+C+ L+SQL N SR+KLIYAN R+VVHIAKQY
Sbjct: 281 EEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQY 340
Query: 362 LGRGLNLQD 388
GRGLNLQD
Sbjct: 341 QGRGLNLQD 349
>XP_019077288.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Vitis vinifera]
Length = 566
Score = 171 bits (433), Expect = 4e-48
Identities = 87/129 (67%), Positives = 101/129 (78%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV V E S+RA+++R+ ++ P D LRLF W PET+KLLTAKEESELIV IQELMRL
Sbjct: 226 KVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRL 285
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
EEVK RL REPT+VEWAEA GL+C+ L+SQL N SR+KLIYAN R+VVHIAKQY
Sbjct: 286 EEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQY 345
Query: 362 LGRGLNLQD 388
GRGLNLQD
Sbjct: 346 QGRGLNLQD 354
>XP_010653602.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Vitis vinifera]
Length = 567
Score = 171 bits (433), Expect = 4e-48
Identities = 87/129 (67%), Positives = 101/129 (78%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV V E S+RA+++R+ ++ P D LRLF W PET+KLLTAKEESELIV IQELMRL
Sbjct: 227 KVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRL 286
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
EEVK RL REPT+VEWAEA GL+C+ L+SQL N SR+KLIYAN R+VVHIAKQY
Sbjct: 287 EEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQY 346
Query: 362 LGRGLNLQD 388
GRGLNLQD
Sbjct: 347 QGRGLNLQD 355
>XP_007027376.2 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic
[Theobroma cacao]
Length = 568
Score = 171 bits (432), Expect = 6e-48
Identities = 84/129 (65%), Positives = 103/129 (79%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV ++ET SS+R D+RR+ S+ P+D LRLF W PETK+LLTAKEESEL +Q LMRL
Sbjct: 228 KVTIRETYSSRRTDVRRKLSEGFDPNDPLRLFLWGPETKQLLTAKEESELSNQVQNLMRL 287
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
E+VK +L QFGREPT+VEWAEA GL C AL+++L N+SR+KLIYAN R+VVHIAKQY
Sbjct: 288 EKVKSKLQSQFGREPTLVEWAEAIGLRCSALQAELHSGNSSRDKLIYANLRMVVHIAKQY 347
Query: 362 LGRGLNLQD 388
RGL+LQD
Sbjct: 348 QSRGLSLQD 356
>EOY07878.1 RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
Length = 568
Score = 171 bits (432), Expect = 6e-48
Identities = 84/129 (65%), Positives = 103/129 (79%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV ++ET SS+R D+RR+ S+ P+D LRLF W PETK+LLTAKEESEL +Q LMRL
Sbjct: 228 KVTIRETYSSRRTDVRRKLSEGFDPNDPLRLFLWGPETKQLLTAKEESELSNQVQNLMRL 287
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
E+VK +L QFGREPT+VEWAEA GL C AL+++L N+SR+KLIYAN R+VVHIAKQY
Sbjct: 288 EKVKSKLQSQFGREPTLVEWAEAIGLRCSALQAELHSGNSSRDKLIYANLRMVVHIAKQY 347
Query: 362 LGRGLNLQD 388
RGL+LQD
Sbjct: 348 QSRGLSLQD 356
>XP_012443174.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X4 [Gossypium raimondii] KJB62406.1 hypothetical protein
B456_009G415400 [Gossypium raimondii]
Length = 565
Score = 170 bits (431), Expect = 8e-48
Identities = 83/129 (64%), Positives = 104/129 (80%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV++ ET SS+R D+RR+ SK S P+D LRLF W PETK+LLTA+EES LI+ +Q+L RL
Sbjct: 225 KVVICETYSSRRKDVRRKSSKGSDPNDPLRLFLWGPETKQLLTAEEESVLIIQVQDLKRL 284
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
+ K +L QFGREPT+VEWAEA GL+C AL+++LQ SREKLI+AN R+VVHIAKQY
Sbjct: 285 VKEKSKLQSQFGREPTLVEWAEAMGLSCSALQAELQSGKRSREKLIHANLRMVVHIAKQY 344
Query: 362 LGRGLNLQD 388
GRGL+LQD
Sbjct: 345 QGRGLSLQD 353
>XP_012443173.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X3 [Gossypium raimondii] KJB62407.1 hypothetical protein
B456_009G415400 [Gossypium raimondii]
Length = 567
Score = 170 bits (431), Expect = 8e-48
Identities = 83/129 (64%), Positives = 104/129 (80%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV++ ET SS+R D+RR+ SK S P+D LRLF W PETK+LLTA+EES LI+ +Q+L RL
Sbjct: 227 KVVICETYSSRRKDVRRKSSKGSDPNDPLRLFLWGPETKQLLTAEEESVLIIQVQDLKRL 286
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
+ K +L QFGREPT+VEWAEA GL+C AL+++LQ SREKLI+AN R+VVHIAKQY
Sbjct: 287 VKEKSKLQSQFGREPTLVEWAEAMGLSCSALQAELQSGKRSREKLIHANLRMVVHIAKQY 346
Query: 362 LGRGLNLQD 388
GRGL+LQD
Sbjct: 347 QGRGLSLQD 355
>XP_012443172.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Gossypium raimondii]
Length = 570
Score = 170 bits (431), Expect = 8e-48
Identities = 83/129 (64%), Positives = 104/129 (80%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV++ ET SS+R D+RR+ SK S P+D LRLF W PETK+LLTA+EES LI+ +Q+L RL
Sbjct: 230 KVVICETYSSRRKDVRRKSSKGSDPNDPLRLFLWGPETKQLLTAEEESVLIIQVQDLKRL 289
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
+ K +L QFGREPT+VEWAEA GL+C AL+++LQ SREKLI+AN R+VVHIAKQY
Sbjct: 290 VKEKSKLQSQFGREPTLVEWAEAMGLSCSALQAELQSGKRSREKLIHANLRMVVHIAKQY 349
Query: 362 LGRGLNLQD 388
GRGL+LQD
Sbjct: 350 QGRGLSLQD 358
>AKC88770.1 sigma factor [Francoa sonchifolia]
Length = 549
Score = 170 bits (430), Expect = 8e-48
Identities = 82/129 (63%), Positives = 103/129 (79%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV V ET S+R D++R+ S+ P+D LR+F W PETK+LLTAKEE ELI HIQ++M+L
Sbjct: 209 KVGVHETFHSRRTDIKRKSSEGFDPNDPLRMFLWGPETKQLLTAKEEFELIDHIQDMMKL 268
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
EEVK RL QFG EPT++EWAEA G++CR L+SQL+ +N SREKLI AN R+VVHIAKQY
Sbjct: 269 EEVKSRLLSQFGHEPTLIEWAEAAGISCRVLQSQLRTANKSREKLINANLRMVVHIAKQY 328
Query: 362 LGRGLNLQD 388
LG+GL+ D
Sbjct: 329 LGKGLSFPD 337
>XP_012443171.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Gossypium raimondii]
Length = 572
Score = 170 bits (431), Expect = 8e-48
Identities = 83/129 (64%), Positives = 104/129 (80%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV++ ET SS+R D+RR+ SK S P+D LRLF W PETK+LLTA+EES LI+ +Q+L RL
Sbjct: 232 KVVICETYSSRRKDVRRKSSKGSDPNDPLRLFLWGPETKQLLTAEEESVLIIQVQDLKRL 291
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
+ K +L QFGREPT+VEWAEA GL+C AL+++LQ SREKLI+AN R+VVHIAKQY
Sbjct: 292 VKEKSKLQSQFGREPTLVEWAEAMGLSCSALQAELQSGKRSREKLIHANLRMVVHIAKQY 351
Query: 362 LGRGLNLQD 388
GRGL+LQD
Sbjct: 352 QGRGLSLQD 360
>XP_010241846.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X4 [Nelumbo nucifera]
Length = 525
Score = 169 bits (427), Expect = 2e-47
Identities = 81/129 (62%), Positives = 103/129 (79%)
Frame = +2
Query: 2 KVIVQETISSKRADLRRRKSKASAPDDALRLFSWVPETKKLLTAKEESELIVHIQELMRL 181
KV+V E +S+++D+ ++ + +D LRLF W PETK+LLT KEESEL VH+QEL+RL
Sbjct: 186 KVVVSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLTPKEESELFVHVQELIRL 245
Query: 182 EEVKGRLHDQFGREPTMVEWAEATGLTCRALKSQLQCSNNSREKLIYANFRLVVHIAKQY 361
EEVK RL QF REPT+VEWAEA G+TC++L+S L N+SREK+IYANFRLVVH+AK Y
Sbjct: 246 EEVKQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSSREKIIYANFRLVVHVAKHY 305
Query: 362 LGRGLNLQD 388
G+GLNLQD
Sbjct: 306 QGQGLNLQD 314