BLASTX nr result

ID: Panax25_contig00016590 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00016590
         (365 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002277849.1 PREDICTED: H/ACA ribonucleoprotein complex subuni...    53   8e-06
CBI21553.3 unnamed protein product, partial [Vitis vinifera]           53   9e-06

>XP_002277849.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 1 [Vitis
           vinifera] CAN82465.1 hypothetical protein VITISV_002662
           [Vitis vinifera]
          Length = 255

 Score = 53.1 bits (126), Expect = 8e-06
 Identities = 24/27 (88%), Positives = 24/27 (88%)
 Frame = -1

Query: 365 LDTSSVGYQQPIPVDQVKPLNEYEYEG 285
           LDTSS GYQ PIPVDQVKPLNE EYEG
Sbjct: 117 LDTSSTGYQPPIPVDQVKPLNELEYEG 143


>CBI21553.3 unnamed protein product, partial [Vitis vinifera]
          Length = 282

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 24/27 (88%), Positives = 24/27 (88%)
 Frame = -1

Query: 365 LDTSSVGYQQPIPVDQVKPLNEYEYEG 285
           LDTSS GYQ PIPVDQVKPLNE EYEG
Sbjct: 144 LDTSSTGYQPPIPVDQVKPLNELEYEG 170


Top