BLASTX nr result

ID: Panax25_contig00016504 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00016504
         (382 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017215792.1 PREDICTED: uncharacterized protein LOC108193587 [...    79   1e-16
KVI06102.1 hypothetical protein Ccrd_015571 [Cynara cardunculus ...    61   6e-09
KVH99040.1 hypothetical protein Ccrd_022728 [Cynara cardunculus ...    52   2e-06
KZM91258.1 hypothetical protein DCAR_021377 [Daucus carota subsp...    51   9e-06

>XP_017215792.1 PREDICTED: uncharacterized protein LOC108193587 [Daucus carota
           subsp. sativus] XP_017215793.1 PREDICTED:
           uncharacterized protein LOC108193587 [Daucus carota
           subsp. sativus] KZM88536.1 hypothetical protein
           DCAR_025611 [Daucus carota subsp. sativus]
          Length = 100

 Score = 78.6 bits (192), Expect = 1e-16
 Identities = 40/62 (64%), Positives = 43/62 (69%)
 Frame = -3

Query: 188 MVLDSKITSPHQRQSSFNSPSFRRAYTRGDELGSFSKXXXXXXXXXXXXXXXXXLCTIYL 9
           MVLDSKITSPH+RQ+SFNSPSFR+ YTRGDELGSFS                  LCTIYL
Sbjct: 1   MVLDSKITSPHRRQNSFNSPSFRKPYTRGDELGSFSTLINRHRFLLVALVLLTFLCTIYL 60

Query: 8   YF 3
           YF
Sbjct: 61  YF 62


>KVI06102.1 hypothetical protein Ccrd_015571 [Cynara cardunculus var. scolymus]
          Length = 184

 Score = 60.8 bits (146), Expect = 6e-09
 Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = -3

Query: 188 MVLDSKITSPHQR-QSSFNSPSFRRAYTRGDELGSFSKXXXXXXXXXXXXXXXXXLCTIY 12
           MVLD  ITSPH+R Q++F+SPSF++ YT+ DELGSFS                  LCTIY
Sbjct: 85  MVLDGIITSPHRRSQTAFSSPSFKKQYTKEDELGSFSTVIRRHRYLLTALVLLAVLCTIY 144

Query: 11  LYF 3
           LYF
Sbjct: 145 LYF 147


>KVH99040.1 hypothetical protein Ccrd_022728 [Cynara cardunculus var. scolymus]
          Length = 102

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = -3

Query: 188 MVLDSKITSPHQR--QSSFNSPSFRRAYTRGDELGSFSKXXXXXXXXXXXXXXXXXLCTI 15
           M LD  ITSPH+R  Q++F+S S R+ YT G+ELG+FS                  LCT+
Sbjct: 1   MALDGVITSPHRRTQQTAFSSTSSRKNYTTGNELGNFSTVIRRHRFLLTALVLLAFLCTV 60

Query: 14  YLYF 3
           YLYF
Sbjct: 61  YLYF 64


>KZM91258.1 hypothetical protein DCAR_021377 [Daucus carota subsp. sativus]
          Length = 101

 Score = 50.8 bits (120), Expect = 9e-06
 Identities = 28/61 (45%), Positives = 34/61 (55%)
 Frame = -3

Query: 188 MVLDSKITSPHQRQSSFNSPSFRRAYTRGDELGSFSKXXXXXXXXXXXXXXXXXLCTIYL 9
           MV++SK  SP  +Q+S NSP F++  TR DELGSFS                  LCTIYL
Sbjct: 1   MVVESKTVSPCWKQNSINSPHFKKQQTRLDELGSFSTIVHRHRFLLTACALLAFLCTIYL 60

Query: 8   Y 6
           Y
Sbjct: 61  Y 61


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