BLASTX nr result

ID: Panax25_contig00016398 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00016398
         (470 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM96606.1 hypothetical protein DCAR_016032 [Daucus carota subsp...    61   5e-08
XP_017247663.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 20...    61   5e-08
XP_017247662.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 20...    61   5e-08
KVI06292.1 DNA/RNA helicase, DEAD/DEAH box type, N-terminal, par...    60   1e-07
CDP12744.1 unnamed protein product [Coffea canephora]                  57   2e-06
KGN63543.1 hypothetical protein Csa_1G004090 [Cucumis sativus]         54   3e-06
CBI14966.3 unnamed protein product, partial [Vitis vinifera]           54   3e-06
XP_011071940.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 20...    55   9e-06
XP_011071939.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 20...    55   9e-06

>KZM96606.1 hypothetical protein DCAR_016032 [Daucus carota subsp. sativus]
          Length = 627

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 32/52 (61%), Positives = 32/52 (61%)
 Frame = +1

Query: 1   FPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQVVPV 156
           FPSSLEDYVH                   HSN KHARDLIKILQEAGQVVPV
Sbjct: 530 FPSSLEDYVHRIGRTGRAGAKGTAYSFFTHSNAKHARDLIKILQEAGQVVPV 581


>XP_017247663.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X2
           [Daucus carota subsp. sativus]
          Length = 646

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 32/52 (61%), Positives = 32/52 (61%)
 Frame = +1

Query: 1   FPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQVVPV 156
           FPSSLEDYVH                   HSN KHARDLIKILQEAGQVVPV
Sbjct: 549 FPSSLEDYVHRIGRTGRAGAKGTAYSFFTHSNAKHARDLIKILQEAGQVVPV 600


>XP_017247662.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1
           [Daucus carota subsp. sativus]
          Length = 658

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 32/52 (61%), Positives = 32/52 (61%)
 Frame = +1

Query: 1   FPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQVVPV 156
           FPSSLEDYVH                   HSN KHARDLIKILQEAGQVVPV
Sbjct: 561 FPSSLEDYVHRIGRTGRAGAKGTAYSFFTHSNAKHARDLIKILQEAGQVVPV 612


>KVI06292.1 DNA/RNA helicase, DEAD/DEAH box type, N-terminal, partial [Cynara
           cardunculus var. scolymus]
          Length = 652

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 31/52 (59%), Positives = 33/52 (63%)
 Frame = +1

Query: 1   FPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQVVPV 156
           FPSSLEDYVH                   HSN+KHAR+LIKILQEAGQVVPV
Sbjct: 554 FPSSLEDYVHRIGRTGRAGAKGIAITFFTHSNSKHARELIKILQEAGQVVPV 605


>CDP12744.1 unnamed protein product [Coffea canephora]
          Length = 624

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/97 (35%), Positives = 39/97 (40%)
 Frame = +1

Query: 1   FPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQVVPVPXXXXXXX 180
           FPSSLEDYVH                   H+N K ARDLIKIL++AGQ++P         
Sbjct: 528 FPSSLEDYVHRIGRTGRAGATGTAFTFFTHANAKFARDLIKILRDAGQIIPPDLSAMARS 587

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXNTIPLGAKMHW 291
                                     NTIPLGAK  W
Sbjct: 588 TGSTMGGNNFRSRGRGGFGNRGISGSNTIPLGAKKPW 624


>KGN63543.1 hypothetical protein Csa_1G004090 [Cucumis sativus]
          Length = 131

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 27/50 (54%), Positives = 29/50 (58%)
 Frame = +1

Query: 1   FPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQVV 150
           FPSSLEDYVH                   H N KHARDLIKIL+EAGQ+V
Sbjct: 32  FPSSLEDYVHRIGRTGRAGAKGTAFTFFTHENAKHARDLIKILREAGQIV 81


>CBI14966.3 unnamed protein product, partial [Vitis vinifera]
          Length = 132

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 29/50 (58%), Positives = 29/50 (58%)
 Frame = +1

Query: 1   FPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQVV 150
           FPSSLEDYVH                   HSN K ARDLIKILQEAGQVV
Sbjct: 32  FPSSLEDYVHRIGRTGRAGAKGTAITFFTHSNAKFARDLIKILQEAGQVV 81


>XP_011071940.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X2
           [Sesamum indicum]
          Length = 600

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 28/51 (54%), Positives = 30/51 (58%)
 Frame = +1

Query: 1   FPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQVVP 153
           FPSSLEDYVH                   H N K+ARDLIKILQ+AGQVVP
Sbjct: 501 FPSSLEDYVHRIGRTGRAGASGTAFSFFTHGNAKYARDLIKILQQAGQVVP 551


>XP_011071939.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1
           [Sesamum indicum]
          Length = 626

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 28/51 (54%), Positives = 30/51 (58%)
 Frame = +1

Query: 1   FPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQVVP 153
           FPSSLEDYVH                   H N K+ARDLIKILQ+AGQVVP
Sbjct: 527 FPSSLEDYVHRIGRTGRAGASGTAFSFFTHGNAKYARDLIKILQQAGQVVP 577


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