BLASTX nr result

ID: Panax25_contig00016170 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00016170
         (675 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KDP25042.1 hypothetical protein JCGZ_22577 [Jatropha curcas]           61   3e-07
XP_012087452.1 PREDICTED: uncharacterized protein LOC105646246 [...    60   5e-07
KVI05798.1 Helicase Sen1, N-terminal [Cynara cardunculus var. sc...    57   7e-06

>KDP25042.1 hypothetical protein JCGZ_22577 [Jatropha curcas]
          Length = 2752

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
 Frame = -3

Query: 649  NRRKGKSEHGVSAKKDLGPVVMDGSVNKTYKEVKSIIAGQITGNK--------------- 515
            ++RK +++H +       P V     N+T K VK  ++ +   N                
Sbjct: 2559 SKRKARADHDL-------PPVHASDENRTSKNVKCAVSREYVRNSESKCNYRSEKKQDFK 2611

Query: 514  --NRGKMS-------SEKQLEVGNSNTGDGNR--DANDKARASNQFGNPKDAISRRKQQR 368
              ++GK         S++ LE+  S+ G  N+  + ND  R SN+ G  +D I++RK+QR
Sbjct: 2612 DPHKGKKKDTCMNSKSDRNLEISTSSAGGNNKGGEIND-GRISNELGASEDIITKRKRQR 2670

Query: 367  DAVDAXXXXXXXXXXXXXXXXXXXXXKRSISPTNTTGRSIKPPNQRKG*VIC 212
            +AVDA                     K+S+SPT+     I+PP +RKG + C
Sbjct: 2671 EAVDAILCSSLISSKKPESSTRPVPTKKSLSPTSIATNGIRPPKKRKGKLPC 2722


>XP_012087452.1 PREDICTED: uncharacterized protein LOC105646246 [Jatropha curcas]
          Length = 2797

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
 Frame = -3

Query: 649  NRRKGKSEHGVSAKKDLGPVVMDGSVNKTYKEVKSIIAGQITGNK--------------- 515
            ++RK +++H +       P V     N+T K VK  ++ +   N                
Sbjct: 2627 SKRKARADHDL-------PPVHASDENRTSKNVKCAVSREYVRNSESKCNYRSEKKQDFK 2679

Query: 514  --NRGKMS-------SEKQLEVGNSNTGDGNR--DANDKARASNQFGNPKDAISRRKQQR 368
              ++GK         S++ LE+  S+ G  N+  + ND  R SN+ G  +D I++RK+QR
Sbjct: 2680 DPHKGKKKDTCMNSKSDRNLEISTSSAGGNNKGGEIND-GRISNELGASEDIITKRKRQR 2738

Query: 367  DAVDAXXXXXXXXXXXXXXXXXXXXXKRSISPTNTTGRSIKPPNQRKG*VICS 209
            +AVDA                     K+S+SPT+     I+PP +RKG  I S
Sbjct: 2739 EAVDAILCSSLISSKKPESSTRPVPTKKSLSPTSIATNGIRPPKKRKGPSISS 2791


>KVI05798.1 Helicase Sen1, N-terminal [Cynara cardunculus var. scolymus]
          Length = 2083

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
 Frame = -3

Query: 646  RRKGKSEHGVSAKKDLGPVVMDGSVNKTYKEVK-SIIAGQITGNKNRGKMSSEKQL---E 479
            +++ K  +  SAKK    V  + SVNKT K+VK +    + T   + GK   E+Q     
Sbjct: 1917 KKRAKKHYDSSAKKSTECVYTESSVNKTLKDVKLATDEHRETHAGSWGKKGVERQRFDRN 1976

Query: 478  VGNSNTGDGNRDANDKARASNQFGNPKDAISRRKQQRDAVDAXXXXXXXXXXXXXXXXXX 299
            V      +      + +R+S Q   P D+I +RKQQR+AVDA                  
Sbjct: 1977 VAGDKPLNETIQREEGSRSSGQVEKPMDSICKRKQQREAVDALLPSAFISSKKPESKLKS 2036

Query: 298  XXXKRSISPTNTTGRSIKPPNQRKG 224
               +RS  P   +  +IKP   RKG
Sbjct: 2037 VPDRRSRPPVRPSDHAIKPAKTRKG 2061


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