BLASTX nr result

ID: Panax25_contig00015991 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00015991
         (1133 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    84   1e-13
XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    84   1e-13
XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    84   1e-13
KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp...    84   1e-13

>XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Daucus carota
            subsp. sativus]
          Length = 1045

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
 Frame = +2

Query: 689  LSFGLS*SKLTQEITSKHVSFKCLTPNPFMKTILREAEHFIDEDLLEKNFKIASYDYSVD 868
            L  G    K     +S    + C+TP+   +T   EA+H +  D ++   K+ SY YS  
Sbjct: 654  LDLGNQFQKYGPRESSSKFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKMNSYHYS-- 710

Query: 869  RKDKDCISGYGSIRNNFG*GNCSTSSCME-FGLKDYGSSQGDIYNFQVDNLEYDLFPKCL 1045
              DK CISG+ ++  NFG  NC  SS +E  GL DY SSQ D  +F+VD++EYD  P   
Sbjct: 711  -GDKGCISGFDNMGYNFGHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVF 769

Query: 1046 DEYSDEIKWLSLEACGKNRSMTGAEPS 1126
            D +SD++K    +   +++  + A  S
Sbjct: 770  DFHSDKVKGSCSKPVDRDKGRSDAASS 796


>XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Daucus carota
            subsp. sativus]
          Length = 1133

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
 Frame = +2

Query: 689  LSFGLS*SKLTQEITSKHVSFKCLTPNPFMKTILREAEHFIDEDLLEKNFKIASYDYSVD 868
            L  G    K     +S    + C+TP+   +T   EA+H +  D ++   K+ SY YS  
Sbjct: 654  LDLGNQFQKYGPRESSSKFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKMNSYHYS-- 710

Query: 869  RKDKDCISGYGSIRNNFG*GNCSTSSCME-FGLKDYGSSQGDIYNFQVDNLEYDLFPKCL 1045
              DK CISG+ ++  NFG  NC  SS +E  GL DY SSQ D  +F+VD++EYD  P   
Sbjct: 711  -GDKGCISGFDNMGYNFGHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVF 769

Query: 1046 DEYSDEIKWLSLEACGKNRSMTGAEPS 1126
            D +SD++K    +   +++  + A  S
Sbjct: 770  DFHSDKVKGSCSKPVDRDKGRSDAASS 796


>XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Daucus carota
            subsp. sativus]
          Length = 1235

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
 Frame = +2

Query: 689  LSFGLS*SKLTQEITSKHVSFKCLTPNPFMKTILREAEHFIDEDLLEKNFKIASYDYSVD 868
            L  G    K     +S    + C+TP+   +T   EA+H +  D ++   K+ SY YS  
Sbjct: 654  LDLGNQFQKYGPRESSSKFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKMNSYHYS-- 710

Query: 869  RKDKDCISGYGSIRNNFG*GNCSTSSCME-FGLKDYGSSQGDIYNFQVDNLEYDLFPKCL 1045
              DK CISG+ ++  NFG  NC  SS +E  GL DY SSQ D  +F+VD++EYD  P   
Sbjct: 711  -GDKGCISGFDNMGYNFGHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVF 769

Query: 1046 DEYSDEIKWLSLEACGKNRSMTGAEPS 1126
            D +SD++K    +   +++  + A  S
Sbjct: 770  DFHSDKVKGSCSKPVDRDKGRSDAASS 796


>KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp. sativus]
          Length = 1344

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
 Frame = +2

Query: 689  LSFGLS*SKLTQEITSKHVSFKCLTPNPFMKTILREAEHFIDEDLLEKNFKIASYDYSVD 868
            L  G    K     +S    + C+TP+   +T   EA+H +  D ++   K+ SY YS  
Sbjct: 758  LDLGNQFQKYGPRESSSKFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKMNSYHYS-- 814

Query: 869  RKDKDCISGYGSIRNNFG*GNCSTSSCME-FGLKDYGSSQGDIYNFQVDNLEYDLFPKCL 1045
              DK CISG+ ++  NFG  NC  SS +E  GL DY SSQ D  +F+VD++EYD  P   
Sbjct: 815  -GDKGCISGFDNMGYNFGHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVF 873

Query: 1046 DEYSDEIKWLSLEACGKNRSMTGAEPS 1126
            D +SD++K    +   +++  + A  S
Sbjct: 874  DFHSDKVKGSCSKPVDRDKGRSDAASS 900


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