BLASTX nr result

ID: Panax25_contig00015601 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00015601
         (476 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ONM23809.1 Ras-related protein RABH1b [Zea mays] ONM23810.1 Ras-...    53   2e-06
GAU36357.1 hypothetical protein TSUD_321960 [Trifolium subterran...    51   6e-06

>ONM23809.1 Ras-related protein RABH1b [Zea mays] ONM23810.1 Ras-related
           protein RABH1b [Zea mays] ONM23815.1 Ras-related protein
           RABH1b [Zea mays]
          Length = 80

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 5/42 (11%)
 Frame = -3

Query: 447 LSSLIRYEFV-----SVGKTSIITRFMYDKFDNTYQVTSKLS 337
           +S+L +Y+ V     SVGKTSIITRFMYDKFDNTYQV S L+
Sbjct: 4   VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQVKSFLT 45


>GAU36357.1 hypothetical protein TSUD_321960 [Trifolium subterraneum]
          Length = 63

 Score = 51.2 bits (121), Expect = 6e-06
 Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
 Frame = -3

Query: 447 LSSLIRYEFV-----SVGKTSIITRFMYDKFDNTYQVTSKLSLIKLV*MFTYNCVNLMLF 283
           +S L +Y+ V     SVGKTSIITRFMYDKFDNTYQ T  +  +          V L L+
Sbjct: 4   VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63


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