BLASTX nr result

ID: Panax25_contig00014906 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00014906
         (418 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019230627.1 PREDICTED: U3 small nucleolar RNA-associated prot...    80   1e-14
XP_016480861.1 PREDICTED: U3 small nucleolar RNA-associated prot...    80   1e-14
XP_009613902.1 PREDICTED: U3 small nucleolar RNA-associated prot...    80   1e-14
XP_016471785.1 PREDICTED: U3 small nucleolar RNA-associated prot...    79   3e-14
XP_009783553.1 PREDICTED: cirhin-like [Nicotiana sylvestris]           79   3e-14
XP_016568892.1 PREDICTED: LOW QUALITY PROTEIN: U3 small nucleola...    77   1e-13
XP_013683988.1 PREDICTED: U3 small nucleolar RNA-associated prot...    76   2e-13
XP_018833793.1 PREDICTED: U3 small nucleolar RNA-associated prot...    76   2e-13
AAD48948.1 contains similarity to Pfam family PF00400 -WD domain...    75   6e-13
XP_013630130.1 PREDICTED: U3 small nucleolar RNA-associated prot...    75   6e-13
XP_013683961.1 PREDICTED: U3 small nucleolar RNA-associated prot...    75   6e-13
XP_009134077.1 PREDICTED: U3 small nucleolar RNA-associated prot...    75   6e-13
CDX83149.1 BnaA03g23570D [Brassica napus]                              75   6e-13
XP_002874481.1 transducin family protein [Arabidopsis lyrata sub...    75   6e-13
OAO89427.1 PCN [Arabidopsis thaliana]                                  75   6e-13
XP_010455225.1 PREDICTED: U3 small nucleolar RNA-associated prot...    75   6e-13
NP_567317.2 Transducin family protein / WD-40 repeat family prot...    75   6e-13
XP_019090200.1 PREDICTED: U3 small nucleolar RNA-associated prot...    75   6e-13
JAU66239.1 Cirhin [Noccaea caerulescens]                               75   6e-13
JAU50989.1 Cirhin [Noccaea caerulescens]                               75   6e-13

>XP_019230627.1 PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
           [Nicotiana attenuata] OIT29293.1 hypothetical protein
           A4A49_16368 [Nicotiana attenuata]
          Length = 820

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 39/61 (63%), Positives = 42/61 (68%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQKA 280
           PGSVGWHCQLTIH +PN              G  AAGR+FSSSI+GSVSEWDLFDL QK 
Sbjct: 45  PGSVGWHCQLTIHGNPNSRVSSLVWCRSGSSGGSAAGRLFSSSIDGSVSEWDLFDLRQKI 104

Query: 281 A 283
           A
Sbjct: 105 A 105


>XP_016480861.1 PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
           [Nicotiana tabacum]
          Length = 820

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 39/61 (63%), Positives = 42/61 (68%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQKA 280
           PGSVGWHCQLTIH +PN              G  AAGR+FSSSI+GSVSEWDLFDL QK 
Sbjct: 45  PGSVGWHCQLTIHGNPNSRVSSLVWCRSGSSGGSAAGRLFSSSIDGSVSEWDLFDLRQKI 104

Query: 281 A 283
           A
Sbjct: 105 A 105


>XP_009613902.1 PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
           [Nicotiana tomentosiformis]
          Length = 820

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 39/61 (63%), Positives = 42/61 (68%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQKA 280
           PGSVGWHCQLTIH +PN              G  AAGR+FSSSI+GSVSEWDLFDL QK 
Sbjct: 45  PGSVGWHCQLTIHGNPNSRVSSLVWCRSGSSGGSAAGRLFSSSIDGSVSEWDLFDLRQKI 104

Query: 281 A 283
           A
Sbjct: 105 A 105


>XP_016471785.1 PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
           [Nicotiana tabacum]
          Length = 820

 Score = 78.6 bits (192), Expect = 3e-14
 Identities = 38/61 (62%), Positives = 42/61 (68%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQKA 280
           PGSVGWHCQLTIH +PN              G  AAGR+FS+SI+GSVSEWDLFDL QK 
Sbjct: 45  PGSVGWHCQLTIHGNPNSRVSSLVWCRSGSSGGSAAGRLFSASIDGSVSEWDLFDLRQKI 104

Query: 281 A 283
           A
Sbjct: 105 A 105


>XP_009783553.1 PREDICTED: cirhin-like [Nicotiana sylvestris]
          Length = 820

 Score = 78.6 bits (192), Expect = 3e-14
 Identities = 38/61 (62%), Positives = 42/61 (68%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQKA 280
           PGSVGWHCQLTIH +PN              G  AAGR+FS+SI+GSVSEWDLFDL QK 
Sbjct: 45  PGSVGWHCQLTIHGNPNSRVSSLVWCRSGSSGGSAAGRLFSASIDGSVSEWDLFDLRQKI 104

Query: 281 A 283
           A
Sbjct: 105 A 105


>XP_016568892.1 PREDICTED: LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated
           protein 4 [Capsicum annuum]
          Length = 795

 Score = 76.6 bits (187), Expect = 1e-13
 Identities = 37/61 (60%), Positives = 41/61 (67%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQKA 280
           PGSVGWHCQLTIH +PN                 +AGR+FSSSI+GSVSEWDLFDL QK 
Sbjct: 45  PGSVGWHCQLTIHGNPNSRVSSLVWCRSGSGDSSSAGRLFSSSIDGSVSEWDLFDLMQKV 104

Query: 281 A 283
           A
Sbjct: 105 A 105


>XP_013683988.1 PREDICTED: U3 small nucleolar RNA-associated protein 4-like
           [Brassica napus] CDY34019.1 BnaC03g27960D [Brassica
           napus]
          Length = 804

 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 37/60 (61%), Positives = 42/60 (70%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQKA 280
           PG+VGWHCQLTIH DPN              G L +GR+FSSSI+GS+SEWDLFDL QKA
Sbjct: 44  PGAVGWHCQLTIHGDPNSRISSLAWCRAGSQG-LPSGRLFSSSIDGSISEWDLFDLKQKA 102


>XP_018833793.1 PREDICTED: U3 small nucleolar RNA-associated protein 4 [Juglans
           regia]
          Length = 819

 Score = 75.9 bits (185), Expect = 2e-13
 Identities = 38/59 (64%), Positives = 40/59 (67%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQK 277
           PGSVGWHCQLTIH DPN              G L  GR+FSSSI+GSVSEWDLFDL QK
Sbjct: 45  PGSVGWHCQLTIHGDPNSRVSSLLWCRAGSKG-LPCGRLFSSSIDGSVSEWDLFDLKQK 102


>AAD48948.1 contains similarity to Pfam family PF00400 -WD domain, G-beta
           repeat; score=37.6, E=2.9e-07, N=3 [Arabidopsis
           thaliana] CAB81111.1 AT4g07410 [Arabidopsis thaliana]
          Length = 728

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 36/59 (61%), Positives = 41/59 (69%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQK 277
           PG+VGWHCQLTIH DPN              G L +GR+FSSSI+GS+SEWDLFDL QK
Sbjct: 63  PGAVGWHCQLTIHGDPNSRISSLAWCCSPSIG-LPSGRLFSSSIDGSISEWDLFDLKQK 120


>XP_013630130.1 PREDICTED: U3 small nucleolar RNA-associated protein 4 [Brassica
           oleracea var. oleracea]
          Length = 799

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 36/59 (61%), Positives = 41/59 (69%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQK 277
           PG+VGWHCQLTIH DPN              G L +GR+FSSSI+GS+SEWDLFDL QK
Sbjct: 44  PGAVGWHCQLTIHGDPNSRISSLAWCRAGSQG-LPSGRLFSSSIDGSISEWDLFDLKQK 101


>XP_013683961.1 PREDICTED: U3 small nucleolar RNA-associated protein 4-like
           [Brassica napus]
          Length = 801

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 36/59 (61%), Positives = 41/59 (69%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQK 277
           PG+VGWHCQLTIH DPN              G L +GR+FSSSI+GS+SEWDLFDL QK
Sbjct: 44  PGAVGWHCQLTIHGDPNSRISSLAWCRAGSQG-LPSGRLFSSSIDGSISEWDLFDLKQK 101


>XP_009134077.1 PREDICTED: U3 small nucleolar RNA-associated protein 4 [Brassica
           rapa]
          Length = 801

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 36/59 (61%), Positives = 41/59 (69%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQK 277
           PG+VGWHCQLTIH DPN              G L +GR+FSSSI+GS+SEWDLFDL QK
Sbjct: 44  PGAVGWHCQLTIHGDPNSRISSLAWCRAGSQG-LPSGRLFSSSIDGSISEWDLFDLKQK 101


>CDX83149.1 BnaA03g23570D [Brassica napus]
          Length = 801

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 36/59 (61%), Positives = 41/59 (69%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQK 277
           PG+VGWHCQLTIH DPN              G L +GR+FSSSI+GS+SEWDLFDL QK
Sbjct: 44  PGAVGWHCQLTIHGDPNSRISSLAWCRAGSQG-LPSGRLFSSSIDGSISEWDLFDLKQK 101


>XP_002874481.1 transducin family protein [Arabidopsis lyrata subsp. lyrata]
           EFH50740.1 transducin family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 812

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 36/59 (61%), Positives = 41/59 (69%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQK 277
           PG+VGWHCQLTIH DPN              G L +GR+FSSSI+GS+SEWDLFDL QK
Sbjct: 44  PGAVGWHCQLTIHGDPNSRISSLAWCCSGSKG-LPSGRLFSSSIDGSISEWDLFDLKQK 101


>OAO89427.1 PCN [Arabidopsis thaliana]
          Length = 815

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 36/59 (61%), Positives = 41/59 (69%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQK 277
           PG+VGWHCQLTIH DPN              G L +GR+FSSSI+GS+SEWDLFDL QK
Sbjct: 44  PGAVGWHCQLTIHGDPNSRISSLAWCCSPSIG-LPSGRLFSSSIDGSISEWDLFDLKQK 101


>XP_010455225.1 PREDICTED: U3 small nucleolar RNA-associated protein 4-like isoform
           X3 [Camelina sativa] XP_019090201.1 PREDICTED: U3 small
           nucleolar RNA-associated protein 4-like isoform X2
           [Camelina sativa]
          Length = 815

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 36/59 (61%), Positives = 41/59 (69%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQK 277
           PG+VGWHCQLTIH DPN              G L +GR+FSSSI+GS+SEWDLFDL QK
Sbjct: 44  PGAVGWHCQLTIHGDPNSRISSLAWCRAGSNG-LPSGRLFSSSIDGSISEWDLFDLKQK 101


>NP_567317.2 Transducin family protein / WD-40 repeat family protein
           [Arabidopsis thaliana] AAL86343.1 unknown protein
           [Arabidopsis thaliana] AAM91698.1 unknown protein
           [Arabidopsis thaliana] AEE82567.1 Transducin family
           protein / WD-40 repeat family protein [Arabidopsis
           thaliana]
          Length = 815

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 36/59 (61%), Positives = 41/59 (69%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQK 277
           PG+VGWHCQLTIH DPN              G L +GR+FSSSI+GS+SEWDLFDL QK
Sbjct: 44  PGAVGWHCQLTIHGDPNSRISSLAWCCSPSIG-LPSGRLFSSSIDGSISEWDLFDLKQK 101


>XP_019090200.1 PREDICTED: U3 small nucleolar RNA-associated protein 4-like isoform
           X1 [Camelina sativa]
          Length = 816

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 36/59 (61%), Positives = 41/59 (69%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQK 277
           PG+VGWHCQLTIH DPN              G L +GR+FSSSI+GS+SEWDLFDL QK
Sbjct: 44  PGAVGWHCQLTIHGDPNSRISSLAWCRAGSNG-LPSGRLFSSSIDGSISEWDLFDLKQK 101


>JAU66239.1 Cirhin [Noccaea caerulescens]
          Length = 818

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 36/59 (61%), Positives = 41/59 (69%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQK 277
           PG+VGWHCQLTIH DPN              G L +GR+FSSSI+GS+SEWDLFDL QK
Sbjct: 44  PGAVGWHCQLTIHGDPNSRISSLAWCRAGSQG-LPSGRLFSSSIDGSISEWDLFDLKQK 101


>JAU50989.1 Cirhin [Noccaea caerulescens]
          Length = 818

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 36/59 (61%), Positives = 41/59 (69%)
 Frame = +2

Query: 101 PGSVGWHCQLTIHVDPNXXXXXXXXXXXXXXGFLAAGRMFSSSINGSVSEWDLFDLTQK 277
           PG+VGWHCQLTIH DPN              G L +GR+FSSSI+GS+SEWDLFDL QK
Sbjct: 44  PGAVGWHCQLTIHGDPNSRISSLAWCRAGSQG-LPSGRLFSSSIDGSISEWDLFDLKQK 101


Top