BLASTX nr result
ID: Panax25_contig00014888
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00014888
(444 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002283616.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 86 4e-18
CBI33662.3 unnamed protein product, partial [Vitis vinifera] 84 1e-17
XP_019182997.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 84 1e-17
XP_017250144.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 83 3e-17
XP_019182999.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 80 4e-16
XP_018815481.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 80 8e-16
XP_016471783.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 79 8e-16
XP_019249277.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 79 1e-15
XP_009763742.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 79 1e-15
XP_007215996.1 hypothetical protein PRUPE_ppa011873mg [Prunus pe... 79 3e-15
XP_015962940.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 78 4e-15
XP_009615234.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 77 5e-15
KVI02804.1 Ribosomal protein PSRP-3/Ycf65 [Cynara cardunculus va... 77 6e-15
XP_010263402.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 77 1e-14
XP_016194781.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 76 1e-14
XP_015962939.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 76 2e-14
XP_019053207.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 76 2e-14
XP_008230398.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 75 4e-14
XP_009357057.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 74 1e-13
XP_010265176.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 74 2e-13
>XP_002283616.1 PREDICTED: 30S ribosomal protein 3, chloroplastic [Vitis vinifera]
Length = 176
Score = 85.5 bits (210), Expect = 4e-18
Identities = 54/121 (44%), Positives = 74/121 (61%)
Frame = -2
Query: 365 MLLSPMAMKPTPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKIRHFX 186
M+LS MA++P PN +L++ + FP+ R + S + + S +T +R
Sbjct: 1 MMLS-MAVQPNPNAALKS-----YTFPMSSNRNHRLMFKSSNALSLYSTRSASTNLR-LR 53
Query: 185 XXXXXXXXXALDQESIANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALD 6
A+ ++S A S S++PL+ EKLGVVVKPMEKPRLVLKFIWMEKNIG+ALD
Sbjct: 54 ASPAPVVAVAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKNIGVALD 113
Query: 5 Q 3
Q
Sbjct: 114 Q 114
>CBI33662.3 unnamed protein product, partial [Vitis vinifera]
Length = 175
Score = 84.3 bits (207), Expect = 1e-17
Identities = 51/116 (43%), Positives = 70/116 (60%)
Frame = -2
Query: 350 MAMKPTPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKIRHFXXXXXX 171
MA++P PN +L++ + FP+ R + S + + S +T +R
Sbjct: 4 MAVQPNPNAALKS-----YTFPMSSNRNHRLMFKSSNALSLYSTRSASTNLR-LRASPAP 57
Query: 170 XXXXALDQESIANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
A+ ++S A S S++PL+ EKLGVVVKPMEKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 58 VVAVAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKNIGVALDQ 113
>XP_019182997.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X1
[Ipomoea nil]
Length = 176
Score = 84.3 bits (207), Expect = 1e-17
Identities = 57/122 (46%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Frame = -2
Query: 365 MLLSPMAMKPTPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKIRH-F 189
M+LS A +P NC LE+ P + F K FFP P + P+ R +
Sbjct: 1 MMLSAAA-RPAVNCILES-PASSFS-----SHKPFLPNKLFFPQPPTAASQPSLLSRKLY 53
Query: 188 XXXXXXXXXXALDQESIANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLAL 9
AL QE+ A S SS PL EKLGVVVKPMEKPRLVLKFIW+EKNIG++L
Sbjct: 54 VSASSSAAVDALSQETSAK-GSFSSTPLHKEKLGVVVKPMEKPRLVLKFIWLEKNIGISL 112
Query: 8 DQ 3
DQ
Sbjct: 113 DQ 114
>XP_017250144.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Daucus
carota subsp. sativus] XP_017250145.1 PREDICTED: 30S
ribosomal protein 3, chloroplastic-like [Daucus carota
subsp. sativus]
Length = 182
Score = 83.2 bits (204), Expect = 3e-17
Identities = 54/112 (48%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Frame = -2
Query: 335 TPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKIRHFXXXXXXXXXXA 156
T C+ LP R + P SI + P IS + KIRHF
Sbjct: 18 TTYCNNHLLPIRRQLHP----SPSIHLNPLIRVLPHSISGNNNNKIRHFYASSAAAAV-- 71
Query: 155 LDQESIAND-NSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
E+ +D +S SS PL+S+KLGVVVKPMEKPRLVLKF+WMEKNIGLALDQ
Sbjct: 72 ---ETFTDDYDSDSSTPLQSKKLGVVVKPMEKPRLVLKFVWMEKNIGLALDQ 120
>XP_019182999.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X2
[Ipomoea nil]
Length = 165
Score = 80.1 bits (196), Expect = 4e-16
Identities = 53/121 (43%), Positives = 63/121 (52%)
Frame = -2
Query: 365 MLLSPMAMKPTPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKIRHFX 186
M+LS A +P NC LE+ P + F K FFP P + P+ R
Sbjct: 1 MMLSAAA-RPAVNCILES-PASSFS-----SHKPFLPNKLFFPQPPTAASQPSLLSRKLY 53
Query: 185 XXXXXXXXXALDQESIANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALD 6
S + S SS PL EKLGVVVKPMEKPRLVLKFIW+EKNIG++LD
Sbjct: 54 V-----------SASSSAAGSFSSTPLHKEKLGVVVKPMEKPRLVLKFIWLEKNIGISLD 102
Query: 5 Q 3
Q
Sbjct: 103 Q 103
>XP_018815481.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Juglans
regia] XP_018815483.1 PREDICTED: 30S ribosomal protein
3, chloroplastic-like [Juglans regia] XP_018815484.1
PREDICTED: 30S ribosomal protein 3, chloroplastic-like
[Juglans regia] XP_018815485.1 PREDICTED: 30S ribosomal
protein 3, chloroplastic-like [Juglans regia]
Length = 188
Score = 79.7 bits (195), Expect = 8e-16
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 7/124 (5%)
Frame = -2
Query: 353 PMAMKPTPNCSLETLPQTRFMFPIQPPRKS-IFVKS-----SFFPSPMRISCSPTTKI-R 195
PMA++P + SL+ L F ++P K+ IF + S P R S S T+I +
Sbjct: 3 PMAIQPNLSPSLKPLAFPLQSFFLKPFEKAPIFARPHSLSHSVLKQPSRHSHSQRTRIFK 62
Query: 194 HFXXXXXXXXXXALDQESIANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGL 15
A+ ++++++D+S S +P + EKLGVVVK +EKPRLVLKFIWMEKNIG+
Sbjct: 63 LSASASAEAAEAAVAEDTLSDDDSPSESPPDKEKLGVVVKSLEKPRLVLKFIWMEKNIGI 122
Query: 14 ALDQ 3
ALDQ
Sbjct: 123 ALDQ 126
>XP_016471783.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
tabacum]
Length = 173
Score = 79.3 bits (194), Expect = 8e-16
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = -2
Query: 137 ANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
+ NS SSAPL+ EKLGVVVKP+EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 67 STQNSVSSAPLQKEKLGVVVKPLEKPRLVLKFIWMEKNIGIALDQ 111
>XP_019249277.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
attenuata] OIT00007.1 30s ribosomal protein 3,
chloroplastic [Nicotiana attenuata]
Length = 173
Score = 79.0 bits (193), Expect = 1e-15
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = -2
Query: 146 ESIANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
E + +S SSAPL+ EKLGVVVKP+EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 64 EETSTQDSVSSAPLQKEKLGVVVKPLEKPRLVLKFIWMEKNIGIALDQ 111
>XP_009763742.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
sylvestris] XP_016436838.1 PREDICTED: 30S ribosomal
protein 3, chloroplastic-like [Nicotiana tabacum]
Length = 173
Score = 79.0 bits (193), Expect = 1e-15
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = -2
Query: 146 ESIANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
E + +S SSAPL+ EKLGVVVKP+EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 64 EETSTQDSVSSAPLQKEKLGVVVKPLEKPRLVLKFIWMEKNIGIALDQ 111
>XP_007215996.1 hypothetical protein PRUPE_ppa011873mg [Prunus persica] ONI18775.1
hypothetical protein PRUPE_3G238100 [Prunus persica]
Length = 192
Score = 78.6 bits (192), Expect = 3e-15
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = -2
Query: 152 DQESIANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
++ + A+DN + PLE EKLGVVVKP+EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 81 EETAAADDNLTTETPLEKEKLGVVVKPIEKPRLVLKFIWMEKNIGIALDQ 130
>XP_015962940.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X2
[Arachis duranensis]
Length = 178
Score = 77.8 bits (190), Expect = 4e-15
Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Frame = -2
Query: 362 LLSPMAMKPTPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPT---TKIRH 192
LL P + PT + T P P++P +K+S FP+P S T +K+
Sbjct: 6 LLQPNVV-PTLSLKPSTFPSQSQSLPLRP------LKASSFPNPKPFFSSLTPNPSKLSV 58
Query: 191 FXXXXXXXXXXALDQESIANDNSASS-APLESEKLGVVVKPMEKPRLVLKFIWMEKNIGL 15
F Q+ +A D++ SS +P + +KLGVVVKP EKPRLVLKFIWMEKNIG+
Sbjct: 59 FAAQSETA------QQIVAEDDATSSDSPPQPQKLGVVVKPTEKPRLVLKFIWMEKNIGI 112
Query: 14 ALDQ 3
ALDQ
Sbjct: 113 ALDQ 116
>XP_009615234.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
tomentosiformis] XP_009604408.1 PREDICTED: 30S ribosomal
protein 3, chloroplastic-like [Nicotiana
tomentosiformis]
Length = 173
Score = 77.4 bits (189), Expect = 5e-15
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = -2
Query: 137 ANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
+ +S SSAPL+ EKLGVVVKP+EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 67 STQDSVSSAPLQKEKLGVVVKPLEKPRLVLKFIWMEKNIGIALDQ 111
>KVI02804.1 Ribosomal protein PSRP-3/Ycf65 [Cynara cardunculus var. scolymus]
Length = 168
Score = 77.0 bits (188), Expect = 6e-15
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = -2
Query: 122 ASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
A+ PLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ
Sbjct: 67 AAETPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 106
>XP_010263402.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X1
[Nelumbo nucifera]
Length = 188
Score = 76.6 bits (187), Expect = 1e-14
Identities = 50/112 (44%), Positives = 61/112 (54%), Gaps = 12/112 (10%)
Frame = -2
Query: 302 TRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKI------RHFXXXXXXXXXXALDQES 141
TR FP + + SF P P + SP + + A+++E+
Sbjct: 16 TRSSFPQKFGFNPVNASISFNPKPASLHLSPLVHLIRRPNRKQLRLSTSASAAEAIEEEA 75
Query: 140 IANDNSASSAPLESE------KLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
D SAS+ P ESE KLGVVVKPMEKPRLVLKF+WMEKNIGLALDQ
Sbjct: 76 TTED-SASTTPQESEPFEEKEKLGVVVKPMEKPRLVLKFVWMEKNIGLALDQ 126
>XP_016194781.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Arachis
ipaensis]
Length = 178
Score = 76.3 bits (186), Expect = 1e-14
Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 5/125 (4%)
Frame = -2
Query: 362 LLSPMAMKPTPNCSLETLPQTRFMFPIQPPRKSIF-VKSSFFPSPMRISCSPT---TKIR 195
+LS ++P +L P T FP Q ++ +K+S FP+P S T +K+
Sbjct: 1 MLSMALLQPNVVPTLSLKPST---FPSQSQSLTLRPLKASSFPNPKPFFSSSTPNPSKLS 57
Query: 194 HFXXXXXXXXXXALDQESIANDNSASS-APLESEKLGVVVKPMEKPRLVLKFIWMEKNIG 18
F Q+ +A D++ SS +P + +KLGVVVKP EKPRLVLKFIWMEKNIG
Sbjct: 58 AFAAQSETA------QQIVAEDDATSSDSPPQPQKLGVVVKPTEKPRLVLKFIWMEKNIG 111
Query: 17 LALDQ 3
+ALDQ
Sbjct: 112 IALDQ 116
>XP_015962939.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X1
[Arachis duranensis]
Length = 182
Score = 75.9 bits (185), Expect = 2e-14
Identities = 49/123 (39%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Frame = -2
Query: 362 LLSPMAMKPTPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPT---TKIRH 192
LL P + PT + T P P++P +K+S FP+P S T +K+
Sbjct: 6 LLQPNVV-PTLSLKPSTFPSQSQSLPLRP------LKASSFPNPKPFFSSLTPNPSKLSV 58
Query: 191 FXXXXXXXXXXALDQESIANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLA 12
F + ++ ++D+ P + +KLGVVVKP EKPRLVLKFIWMEKNIG+A
Sbjct: 59 FAAQSETAQQIVAEDDATSSDSPPQPQP-QPQKLGVVVKPTEKPRLVLKFIWMEKNIGIA 117
Query: 11 LDQ 3
LDQ
Sbjct: 118 LDQ 120
>XP_019053207.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X2
[Nelumbo nucifera]
Length = 187
Score = 75.9 bits (185), Expect = 2e-14
Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 10/110 (9%)
Frame = -2
Query: 302 TRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKI------RHFXXXXXXXXXXALDQES 141
TR FP + + SF P P + SP + + A+++E+
Sbjct: 16 TRSSFPQKFGFNPVNASISFNPKPASLHLSPLVHLIRRPNRKQLRLSTSASAAEAIEEEA 75
Query: 140 IANDNSAS----SAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
D++++ S P E ++LGVVVKPMEKPRLVLKF+WMEKNIGLALDQ
Sbjct: 76 TTEDSASTTPQESEPFEEKELGVVVKPMEKPRLVLKFVWMEKNIGLALDQ 125
>XP_008230398.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Prunus
mume]
Length = 192
Score = 75.5 bits (184), Expect = 4e-14
Identities = 35/50 (70%), Positives = 43/50 (86%)
Frame = -2
Query: 152 DQESIANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
++++ A+DN + LE EKLGVVVKP+EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 81 EEKAAADDNLTTETLLEKEKLGVVVKPIEKPRLVLKFIWMEKNIGIALDQ 130
>XP_009357057.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Pyrus x
bretschneideri]
Length = 189
Score = 73.9 bits (180), Expect = 1e-13
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = -2
Query: 149 QESIANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
+E+ +D +A +AP E EKLGVVVKP EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 80 EETATDDEAADTAP-EKEKLGVVVKPFEKPRLVLKFIWMEKNIGIALDQ 127
>XP_010265176.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X1
[Nelumbo nucifera]
Length = 179
Score = 73.6 bits (179), Expect = 2e-13
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = -2
Query: 149 QESIANDNSASSAPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
+E +ND+SA E EKLGV VKPMEKPRLVLKFIWMEKNIG++LDQ
Sbjct: 69 EEETSNDDSAPEPLEEKEKLGVAVKPMEKPRLVLKFIWMEKNIGISLDQ 117