BLASTX nr result
ID: Panax25_contig00014773
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax25_contig00014773 (404 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAN78649.1 hypothetical protein VITISV_036363 [Vitis vinifera] 72 2e-12 XP_006386314.1 hypothetical protein POPTR_0002s070802g, partial ... 62 4e-09 XP_006386315.1 hypothetical protein POPTR_0002s070802g, partial ... 55 2e-06 >CAN78649.1 hypothetical protein VITISV_036363 [Vitis vinifera] Length = 358 Score = 72.4 bits (176), Expect = 2e-12 Identities = 48/88 (54%), Positives = 54/88 (61%), Gaps = 5/88 (5%) Frame = -2 Query: 403 ETCICKLVLVVVGTCTCEPVVVGTCICKLVVVVVGTCTCRLVVVV--IYSGNEV---DES 239 ETC CK+V VV TCTC+ VVV TCICK+V+VVVG CTC+LV VV Y+ V ES Sbjct: 72 ETCTCKVV--VVETCTCKVVVVETCICKVVMVVVGXCTCKLVGVVAETYTCKVVVVGVES 129 Query: 238 ALREVVVVTCNGKEGEGSAPEVVAVVIC 155 AL E VV C K E VV IC Sbjct: 130 ALEEEVVGICTCKREE----VVVETCIC 153 Score = 61.6 bits (148), Expect = 2e-08 Identities = 53/136 (38%), Positives = 60/136 (44%), Gaps = 10/136 (7%) Frame = -2 Query: 403 ETCICKLVLVV----------VGTCTCEPVVVGTCICKLVVVVVGTCTCRLVVVVIYSGN 254 ETC CKL VV VG CTC+ VVVG C CKLV VV TCTC++VV Sbjct: 28 ETCTCKLEEVVAGICTCKVVGVGICTCKLVVVGXCTCKLVEEVVETCTCKVVV------- 80 Query: 253 EVDESALREVVVVTCNGKEGEGSAPEVVAVVICSGNXXXXXXXXXXXXXXXXXXXXXVGS 74 V+ + VVV TC K VV VV+ G V S Sbjct: 81 -VETCTCKVVVVETCICK--------VVMVVV--GXCTCKLVGVVAETYTCKVVVVGVES 129 Query: 73 ALGEEVVETCSDKDGE 26 AL EEVV C+ K E Sbjct: 130 ALEEEVVGICTCKREE 145 Score = 54.3 bits (129), Expect = 6e-06 Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 23/69 (33%) Frame = -2 Query: 403 ETCICKLVLVVVGTCTCEPV-----------------------VVGTCICKLVVVVVGTC 293 ETCICK+V+VVVG CTC+ V VVG C CK VVV TC Sbjct: 92 ETCICKVVMVVVGXCTCKLVGVVAETYTCKVVVVGVESALEEEVVGICTCKREEVVVETC 151 Query: 292 TCRLVVVVI 266 CR+V +V+ Sbjct: 152 ICRVVGIVL 160 >XP_006386314.1 hypothetical protein POPTR_0002s070802g, partial [Populus trichocarpa] ERP64111.1 hypothetical protein POPTR_0002s070802g, partial [Populus trichocarpa] Length = 209 Score = 62.0 bits (149), Expect = 4e-09 Identities = 44/93 (47%), Positives = 50/93 (53%), Gaps = 8/93 (8%) Frame = -2 Query: 403 ETCICKLVLVVVGTCTCEPVVVGTCICK-LVVVVVGTCTCRLVVVVIYSGNEVDESALRE 227 ETC CK LVVV E VVGTC CK +VVVVGTCTC+ +VV+ V+E+AL E Sbjct: 120 ETCTCKGALVVVENALEE--VVGTCTCKGALVVVVGTCTCKGALVVV-----VEENALVE 172 Query: 226 VVVVTCNGK-------EGEGSAPEVVAVVICSG 149 VV TC K E EVV C G Sbjct: 173 EVVGTCTCKGVLVVKVEACALVEEVVGTCACKG 205 >XP_006386315.1 hypothetical protein POPTR_0002s070802g, partial [Populus trichocarpa] ERP64112.1 hypothetical protein POPTR_0002s070802g, partial [Populus trichocarpa] Length = 207 Score = 54.7 bits (130), Expect = 2e-06 Identities = 39/86 (45%), Positives = 45/86 (52%), Gaps = 21/86 (24%) Frame = -2 Query: 403 ETCICKLVLV--------VVGTCTCEPV-------------VVGTCICKLVVVVVGTCTC 287 ETC CK LV VVGTCTC+ VVGTC CK +VVGTCTC Sbjct: 120 ETCTCKGALVVVENALEEVVGTCTCKGALVVVVEENALVEEVVGTCTCK-GALVVGTCTC 178 Query: 286 RLVVVVIYSGNEVDESALREVVVVTC 209 + V+VV +V+ AL E VV TC Sbjct: 179 KGVLVV-----KVEACALVEEVVGTC 199