BLASTX nr result

ID: Panax25_contig00014773 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00014773
         (404 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAN78649.1 hypothetical protein VITISV_036363 [Vitis vinifera]         72   2e-12
XP_006386314.1 hypothetical protein POPTR_0002s070802g, partial ...    62   4e-09
XP_006386315.1 hypothetical protein POPTR_0002s070802g, partial ...    55   2e-06

>CAN78649.1 hypothetical protein VITISV_036363 [Vitis vinifera]
          Length = 358

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 48/88 (54%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
 Frame = -2

Query: 403 ETCICKLVLVVVGTCTCEPVVVGTCICKLVVVVVGTCTCRLVVVV--IYSGNEV---DES 239
           ETC CK+V  VV TCTC+ VVV TCICK+V+VVVG CTC+LV VV   Y+   V    ES
Sbjct: 72  ETCTCKVV--VVETCTCKVVVVETCICKVVMVVVGXCTCKLVGVVAETYTCKVVVVGVES 129

Query: 238 ALREVVVVTCNGKEGEGSAPEVVAVVIC 155
           AL E VV  C  K  E     VV   IC
Sbjct: 130 ALEEEVVGICTCKREE----VVVETCIC 153



 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 53/136 (38%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
 Frame = -2

Query: 403 ETCICKLVLVV----------VGTCTCEPVVVGTCICKLVVVVVGTCTCRLVVVVIYSGN 254
           ETC CKL  VV          VG CTC+ VVVG C CKLV  VV TCTC++VV       
Sbjct: 28  ETCTCKLEEVVAGICTCKVVGVGICTCKLVVVGXCTCKLVEEVVETCTCKVVV------- 80

Query: 253 EVDESALREVVVVTCNGKEGEGSAPEVVAVVICSGNXXXXXXXXXXXXXXXXXXXXXVGS 74
            V+    + VVV TC  K        VV VV+  G                      V S
Sbjct: 81  -VETCTCKVVVVETCICK--------VVMVVV--GXCTCKLVGVVAETYTCKVVVVGVES 129

Query: 73  ALGEEVVETCSDKDGE 26
           AL EEVV  C+ K  E
Sbjct: 130 ALEEEVVGICTCKREE 145



 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 23/69 (33%)
 Frame = -2

Query: 403 ETCICKLVLVVVGTCTCEPV-----------------------VVGTCICKLVVVVVGTC 293
           ETCICK+V+VVVG CTC+ V                       VVG C CK   VVV TC
Sbjct: 92  ETCICKVVMVVVGXCTCKLVGVVAETYTCKVVVVGVESALEEEVVGICTCKREEVVVETC 151

Query: 292 TCRLVVVVI 266
            CR+V +V+
Sbjct: 152 ICRVVGIVL 160


>XP_006386314.1 hypothetical protein POPTR_0002s070802g, partial [Populus
           trichocarpa] ERP64111.1 hypothetical protein
           POPTR_0002s070802g, partial [Populus trichocarpa]
          Length = 209

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 44/93 (47%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
 Frame = -2

Query: 403 ETCICKLVLVVVGTCTCEPVVVGTCICK-LVVVVVGTCTCRLVVVVIYSGNEVDESALRE 227
           ETC CK  LVVV     E  VVGTC CK  +VVVVGTCTC+  +VV+     V+E+AL E
Sbjct: 120 ETCTCKGALVVVENALEE--VVGTCTCKGALVVVVGTCTCKGALVVV-----VEENALVE 172

Query: 226 VVVVTCNGK-------EGEGSAPEVVAVVICSG 149
            VV TC  K       E      EVV    C G
Sbjct: 173 EVVGTCTCKGVLVVKVEACALVEEVVGTCACKG 205


>XP_006386315.1 hypothetical protein POPTR_0002s070802g, partial [Populus
           trichocarpa] ERP64112.1 hypothetical protein
           POPTR_0002s070802g, partial [Populus trichocarpa]
          Length = 207

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 39/86 (45%), Positives = 45/86 (52%), Gaps = 21/86 (24%)
 Frame = -2

Query: 403 ETCICKLVLV--------VVGTCTCEPV-------------VVGTCICKLVVVVVGTCTC 287
           ETC CK  LV        VVGTCTC+               VVGTC CK   +VVGTCTC
Sbjct: 120 ETCTCKGALVVVENALEEVVGTCTCKGALVVVVEENALVEEVVGTCTCK-GALVVGTCTC 178

Query: 286 RLVVVVIYSGNEVDESALREVVVVTC 209
           + V+VV     +V+  AL E VV TC
Sbjct: 179 KGVLVV-----KVEACALVEEVVGTC 199


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