BLASTX nr result
ID: Panax25_contig00014451
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax25_contig00014451 (778 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value GAV71505.1 RRM_1 domain-containing protein [Cephalotus follicula... 53 2e-11 KJB38875.1 hypothetical protein B456_007G0851001 [Gossypium raim... 46 1e-08 XP_018819308.1 PREDICTED: heterogeneous nuclear ribonucleoprotei... 57 8e-06 XP_018819304.1 PREDICTED: heterogeneous nuclear ribonucleoprotei... 57 8e-06 >GAV71505.1 RRM_1 domain-containing protein [Cephalotus follicularis] Length = 785 Score = 52.8 bits (125), Expect(2) = 2e-11 Identities = 23/29 (79%), Positives = 25/29 (86%) Frame = -1 Query: 775 IRQSRARLDYELGGSASQYGDAYSDRLGR 689 +R SRARLDYELGG ASQYG+ Y DRLGR Sbjct: 667 VRHSRARLDYELGGGASQYGETYGDRLGR 695 Score = 44.7 bits (104), Expect(2) = 2e-11 Identities = 23/48 (47%), Positives = 29/48 (60%) Frame = -2 Query: 597 EALTVVVMVMECTLQALVVITCLTGVMLVVALTHHYILVVAWVEVXMW 454 E L VV +++ TLQA+ ITCL +MLVV TH +VAWV W Sbjct: 727 EVLLVVGKLVDYTLQAMEAITCLVEMMLVVDHTHRCTPLVAWVAAVTW 774 >KJB38875.1 hypothetical protein B456_007G0851001 [Gossypium raimondii] Length = 814 Score = 45.8 bits (107), Expect(2) = 1e-08 Identities = 22/30 (73%), Positives = 22/30 (73%) Frame = -1 Query: 778 GIRQSRARLDYELGGSASQYGDAYSDRLGR 689 G R SRARLDYEL G A Y DAY DRLGR Sbjct: 670 GPRHSRARLDYELAGGAPPYVDAYGDRLGR 699 Score = 42.0 bits (97), Expect(2) = 1e-08 Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -2 Query: 657 LYPVRILMGFIAVVRVWDTVEALTVVVMVMECTLQ-ALVVITCLTGVMLVVALTHHYILV 481 LY R MG+ VR+ V+++ECT +VVITCL +MLVVA TH L Sbjct: 719 LYASRQGMGYGGGVRL--------AAVILVECTRPLVMVVITCLGDLMLVVAPTHPCTLA 770 Query: 480 VAWVEVXMW 454 WV W Sbjct: 771 AVWVVAVTW 779 >XP_018819308.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Juglans regia] Length = 789 Score = 57.4 bits (137), Expect = 8e-06 Identities = 26/30 (86%), Positives = 27/30 (90%) Frame = -1 Query: 778 GIRQSRARLDYELGGSASQYGDAYSDRLGR 689 G+RQSRARLDYE G SASQYGDAY DRLGR Sbjct: 671 GVRQSRARLDYEYGASASQYGDAYGDRLGR 700 >XP_018819304.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Juglans regia] Length = 790 Score = 57.4 bits (137), Expect = 8e-06 Identities = 26/30 (86%), Positives = 27/30 (90%) Frame = -1 Query: 778 GIRQSRARLDYELGGSASQYGDAYSDRLGR 689 G+RQSRARLDYE G SASQYGDAY DRLGR Sbjct: 672 GVRQSRARLDYEYGASASQYGDAYGDRLGR 701