BLASTX nr result
ID: Panax25_contig00014163
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00014163
(457 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZM84054.1 hypothetical protein DCAR_028524 [Daucus carota subsp... 96 4e-20
XP_017222902.1 PREDICTED: pre-mRNA-processing protein 40A-like [... 96 4e-20
XP_010095738.1 Pre-mRNA-processing factor 40-A-like protein [Mor... 92 8e-19
XP_007042685.2 PREDICTED: pre-mRNA-processing protein 40A [Theob... 92 8e-19
EOX98516.1 Pre-mRNA-processing protein 40B, putative [Theobroma ... 92 8e-19
XP_019072118.1 PREDICTED: pre-mRNA-processing protein 40A isofor... 91 2e-18
XP_010664484.1 PREDICTED: pre-mRNA-processing protein 40A isofor... 91 2e-18
EEF40313.1 protein binding protein, putative [Ricinus communis] 89 1e-17
XP_015576607.1 PREDICTED: pre-mRNA-processing protein 40A isofor... 89 1e-17
XP_015576606.1 PREDICTED: pre-mRNA-processing protein 40A isofor... 89 1e-17
XP_016550155.1 PREDICTED: pre-mRNA-processing protein 40A-like [... 88 2e-17
XP_016566430.1 PREDICTED: pre-mRNA-processing protein 40B-like [... 82 6e-17
XP_019243160.1 PREDICTED: pre-mRNA-processing protein 40A-like i... 86 8e-17
OIT04440.1 pre-mrna-processing protein 40a [Nicotiana attenuata] 86 9e-17
XP_019243157.1 PREDICTED: pre-mRNA-processing protein 40A-like i... 86 9e-17
XP_019243156.1 PREDICTED: pre-mRNA-processing protein 40A-like i... 86 9e-17
XP_016479332.1 PREDICTED: pre-mRNA-processing protein 40A-like i... 86 1e-16
XP_009796951.1 PREDICTED: pre-mRNA-processing protein 40A-like [... 86 1e-16
XP_015059010.1 PREDICTED: pre-mRNA-processing protein 40A-like i... 86 1e-16
XP_015059009.1 PREDICTED: pre-mRNA-processing protein 40A-like i... 86 1e-16
>KZM84054.1 hypothetical protein DCAR_028524 [Daucus carota subsp. sativus]
Length = 664
Score = 95.9 bits (237), Expect = 4e-20
Identities = 52/96 (54%), Positives = 57/96 (59%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
EQ KLRMEE+RKAERRNRD+FRKLMEDH+AAG L THWRDYCMK
Sbjct: 341 EQIKLRMEEARKAERRNRDDFRKLMEDHIAAGVLSVNTHWRDYCMKVKELPAYLAVSSNT 400
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
YL+DKAR+KDAVKL KV
Sbjct: 401 SGATPKDLFEDVAEELEKQYLEDKARIKDAVKLGKV 436
>XP_017222902.1 PREDICTED: pre-mRNA-processing protein 40A-like [Daucus carota
subsp. sativus] XP_017222903.1 PREDICTED:
pre-mRNA-processing protein 40A-like [Daucus carota
subsp. sativus]
Length = 990
Score = 95.9 bits (237), Expect = 4e-20
Identities = 52/96 (54%), Positives = 57/96 (59%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
EQ KLRMEE+RKAERRNRD+FRKLMEDH+AAG L THWRDYCMK
Sbjct: 639 EQIKLRMEEARKAERRNRDDFRKLMEDHIAAGVLSVNTHWRDYCMKVKELPAYLAVSSNT 698
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
YL+DKAR+KDAVKL KV
Sbjct: 699 SGATPKDLFEDVAEELEKQYLEDKARIKDAVKLGKV 734
>XP_010095738.1 Pre-mRNA-processing factor 40-A-like protein [Morus notabilis]
EXB62121.1 Pre-mRNA-processing factor 40-A-like protein
[Morus notabilis]
Length = 964
Score = 92.0 bits (227), Expect = 8e-19
Identities = 51/96 (53%), Positives = 57/96 (59%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
EQRK++ EE RKAER+NRDEFRKLMEDHVAAGTL AKTHWRDYC+K
Sbjct: 600 EQRKIQKEELRKAERKNRDEFRKLMEDHVAAGTLTAKTHWRDYCVKVKELPEYQAVASNT 659
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
Y DK+RVKDAVKL K+
Sbjct: 660 SGSTSKDLFEDVVEELQKQYHDDKSRVKDAVKLGKI 695
>XP_007042685.2 PREDICTED: pre-mRNA-processing protein 40A [Theobroma cacao]
XP_017971427.1 PREDICTED: pre-mRNA-processing protein
40A [Theobroma cacao]
Length = 1025
Score = 92.0 bits (227), Expect = 8e-19
Identities = 51/96 (53%), Positives = 57/96 (59%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCM--------------- 322
EQRK++ EE RKAER+NRDEFRKLME HVAAGTL AKTHWRDYCM
Sbjct: 663 EQRKIQKEELRKAERKNRDEFRKLMEGHVAAGTLTAKTHWRDYCMMVKESPPFMAVASNT 722
Query: 321 ------------------KYLKDKARVKDAVKLKKV 268
+Y DKARVKDAVKL+K+
Sbjct: 723 SGSTPKDLFEDVAEELQKQYHDDKARVKDAVKLRKI 758
>EOX98516.1 Pre-mRNA-processing protein 40B, putative [Theobroma cacao]
Length = 1025
Score = 92.0 bits (227), Expect = 8e-19
Identities = 51/96 (53%), Positives = 57/96 (59%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCM--------------- 322
EQRK++ EE RKAER+NRDEFRKLME HVAAGTL AKTHWRDYCM
Sbjct: 663 EQRKIQKEELRKAERKNRDEFRKLMEGHVAAGTLTAKTHWRDYCMMVKESPPFMAVASNT 722
Query: 321 ------------------KYLKDKARVKDAVKLKKV 268
+Y DKARVKDAVKL+K+
Sbjct: 723 SGSTPKDLFEDVAEELQKQYHDDKARVKDAVKLRKI 758
>XP_019072118.1 PREDICTED: pre-mRNA-processing protein 40A isoform X2 [Vitis
vinifera]
Length = 915
Score = 91.3 bits (225), Expect = 2e-18
Identities = 49/96 (51%), Positives = 58/96 (60%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
EQRK++ E+ R+AER+NRDEFRKLME+HVAAGTL AKTHWRDYCMK
Sbjct: 666 EQRKIQKEQLRRAERKNRDEFRKLMEEHVAAGTLTAKTHWRDYCMKVKDSSPYLAVASNT 725
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
Y +DKAR+KDA+KL KV
Sbjct: 726 SGSTPKDLFEDVAEELEKQYHEDKARIKDAMKLSKV 761
>XP_010664484.1 PREDICTED: pre-mRNA-processing protein 40A isoform X1 [Vitis
vinifera] CBI19367.3 unnamed protein product, partial
[Vitis vinifera]
Length = 1030
Score = 91.3 bits (225), Expect = 2e-18
Identities = 49/96 (51%), Positives = 58/96 (60%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
EQRK++ E+ R+AER+NRDEFRKLME+HVAAGTL AKTHWRDYCMK
Sbjct: 666 EQRKIQKEQLRRAERKNRDEFRKLMEEHVAAGTLTAKTHWRDYCMKVKDSSPYLAVASNT 725
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
Y +DKAR+KDA+KL KV
Sbjct: 726 SGSTPKDLFEDVAEELEKQYHEDKARIKDAMKLSKV 761
>EEF40313.1 protein binding protein, putative [Ricinus communis]
Length = 956
Score = 89.0 bits (219), Expect = 1e-17
Identities = 48/96 (50%), Positives = 58/96 (60%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
EQRK++ EE RKAER+NRDEFRKL+E+HVAAGT+ AKTHWRDY +K
Sbjct: 596 EQRKIQKEEQRKAERKNRDEFRKLLEEHVAAGTMTAKTHWRDYYLKVKDLPAYLAVASNT 655
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
Y +DK+R+KDAVKLKKV
Sbjct: 656 SGSTPKDLFEDVLEELEKQYHEDKSRIKDAVKLKKV 691
>XP_015576607.1 PREDICTED: pre-mRNA-processing protein 40A isoform X2 [Ricinus
communis] XP_015576608.1 PREDICTED: pre-mRNA-processing
protein 40A isoform X2 [Ricinus communis]
Length = 1029
Score = 89.0 bits (219), Expect = 1e-17
Identities = 48/96 (50%), Positives = 58/96 (60%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
EQRK++ EE RKAER+NRDEFRKL+E+HVAAGT+ AKTHWRDY +K
Sbjct: 669 EQRKIQKEEQRKAERKNRDEFRKLLEEHVAAGTMTAKTHWRDYYLKVKDLPAYLAVASNT 728
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
Y +DK+R+KDAVKLKKV
Sbjct: 729 SGSTPKDLFEDVLEELEKQYHEDKSRIKDAVKLKKV 764
>XP_015576606.1 PREDICTED: pre-mRNA-processing protein 40A isoform X1 [Ricinus
communis]
Length = 1045
Score = 89.0 bits (219), Expect = 1e-17
Identities = 48/96 (50%), Positives = 58/96 (60%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
EQRK++ EE RKAER+NRDEFRKL+E+HVAAGT+ AKTHWRDY +K
Sbjct: 669 EQRKIQKEEQRKAERKNRDEFRKLLEEHVAAGTMTAKTHWRDYYLKVKDLPAYLAVASNT 728
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
Y +DK+R+KDAVKLKKV
Sbjct: 729 SGSTPKDLFEDVLEELEKQYHEDKSRIKDAVKLKKV 764
>XP_016550155.1 PREDICTED: pre-mRNA-processing protein 40A-like [Capsicum annuum]
Length = 881
Score = 88.2 bits (217), Expect = 2e-17
Identities = 47/96 (48%), Positives = 58/96 (60%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
EQRKLRMEE RKAER+NRDEFRKLME+HVAAG L AKT+WRDYC+K
Sbjct: 532 EQRKLRMEELRKAERKNRDEFRKLMEEHVAAGILNAKTNWRDYCIKIKDFAAYLAVSSNT 591
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
YL DK+++KDAV++ ++
Sbjct: 592 SGSTAKDLFTDVMDELEKQYLDDKSQIKDAVRMVEI 627
>XP_016566430.1 PREDICTED: pre-mRNA-processing protein 40B-like [Capsicum annuum]
Length = 158
Score = 82.0 bits (201), Expect = 6e-17
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMKYLKDKA 301
EQRKLRMEE RKAER+NRDEFRKLME++VAAG L AKT+WRDYC+ +KD A
Sbjct: 78 EQRKLRMEELRKAERKNRDEFRKLMEEYVAAGILNAKTNWRDYCIN-IKDFA 128
>XP_019243160.1 PREDICTED: pre-mRNA-processing protein 40A-like isoform X5
[Nicotiana attenuata] XP_019243161.1 PREDICTED:
pre-mRNA-processing protein 40A-like isoform X5
[Nicotiana attenuata]
Length = 902
Score = 86.3 bits (212), Expect = 8e-17
Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
E RKLRM+E RKAER+NRDEFRKLME+HVAAG L AKT+WRDYC+K
Sbjct: 652 EHRKLRMDEMRKAERKNRDEFRKLMEEHVAAGILNAKTNWRDYCIKVKDLPAYLAVSSNT 711
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
YL DK+R++DAV++ ++
Sbjct: 712 SGPTAKDLFQDVFDELEKQYLDDKSRIRDAVRMAEI 747
>OIT04440.1 pre-mrna-processing protein 40a [Nicotiana attenuata]
Length = 1008
Score = 86.3 bits (212), Expect = 9e-17
Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
E RKLRM+E RKAER+NRDEFRKLME+HVAAG L AKT+WRDYC+K
Sbjct: 651 EHRKLRMDEMRKAERKNRDEFRKLMEEHVAAGILNAKTNWRDYCIKVKDLPAYLAVSSNT 710
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
YL DK+R++DAV++ ++
Sbjct: 711 SGPTAKDLFQDVFDELEKQYLDDKSRIRDAVRMAEI 746
>XP_019243157.1 PREDICTED: pre-mRNA-processing protein 40A-like isoform X4
[Nicotiana attenuata] XP_019243158.1 PREDICTED:
pre-mRNA-processing protein 40A-like isoform X4
[Nicotiana attenuata]
Length = 1018
Score = 86.3 bits (212), Expect = 9e-17
Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
E RKLRM+E RKAER+NRDEFRKLME+HVAAG L AKT+WRDYC+K
Sbjct: 652 EHRKLRMDEMRKAERKNRDEFRKLMEEHVAAGILNAKTNWRDYCIKVKDLPAYLAVSSNT 711
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
YL DK+R++DAV++ ++
Sbjct: 712 SGPTAKDLFQDVFDELEKQYLDDKSRIRDAVRMAEI 747
>XP_019243156.1 PREDICTED: pre-mRNA-processing protein 40A-like isoform X3
[Nicotiana attenuata]
Length = 1019
Score = 86.3 bits (212), Expect = 9e-17
Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
E RKLRM+E RKAER+NRDEFRKLME+HVAAG L AKT+WRDYC+K
Sbjct: 651 EHRKLRMDEMRKAERKNRDEFRKLMEEHVAAGILNAKTNWRDYCIKVKDLPAYLAVSSNT 710
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
YL DK+R++DAV++ ++
Sbjct: 711 SGPTAKDLFQDVFDELEKQYLDDKSRIRDAVRMAEI 746
>XP_016479332.1 PREDICTED: pre-mRNA-processing protein 40A-like isoform X1
[Nicotiana tabacum] XP_016479333.1 PREDICTED:
pre-mRNA-processing protein 40A-like isoform X1
[Nicotiana tabacum]
Length = 734
Score = 85.9 bits (211), Expect = 1e-16
Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
E RKLRM+E RKAER+NRDEFRKLME+HVAAG L AKT+WRDYC+K
Sbjct: 377 EHRKLRMDEMRKAERKNRDEFRKLMEEHVAAGILNAKTNWRDYCIKVKDLPAYLAVSSNT 436
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
YL DK+R++DA+++ ++
Sbjct: 437 SGPKAKDLFQDVFDELEKQYLDDKSRIRDAIRMAEI 472
>XP_009796951.1 PREDICTED: pre-mRNA-processing protein 40A-like [Nicotiana
sylvestris]
Length = 837
Score = 85.9 bits (211), Expect = 1e-16
Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
E RKLRM+E RKAER+NRDEFRKLME+HVAAG L AKT+WRDYC+K
Sbjct: 480 EHRKLRMDEMRKAERKNRDEFRKLMEEHVAAGILNAKTNWRDYCIKVKDLPAYLAVSSNT 539
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
YL DK+R++DA+++ ++
Sbjct: 540 SGPKAKDLFQDVFDELEKQYLDDKSRIRDAIRMAEI 575
>XP_015059010.1 PREDICTED: pre-mRNA-processing protein 40A-like isoform X7 [Solanum
pennellii]
Length = 848
Score = 85.9 bits (211), Expect = 1e-16
Identities = 46/96 (47%), Positives = 56/96 (58%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
EQRKLRMEE RKAER+NRDEFRKLME+HVA G L AKT WRDYC+K
Sbjct: 632 EQRKLRMEELRKAERKNRDEFRKLMEEHVAVGMLNAKTIWRDYCIKIKDIAAYQAISSNT 691
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
YL DK+R++DAV++ ++
Sbjct: 692 SGSSAKDLFADVVDELDKQYLDDKSRIRDAVRMTEI 727
>XP_015059009.1 PREDICTED: pre-mRNA-processing protein 40A-like isoform X6 [Solanum
pennellii]
Length = 1039
Score = 85.9 bits (211), Expect = 1e-16
Identities = 46/96 (47%), Positives = 56/96 (58%), Gaps = 33/96 (34%)
Frame = -2
Query: 456 EQRKLRMEESRKAERRNRDEFRKLMEDHVAAGTLGAKTHWRDYCMK-------------- 319
EQRKLRMEE RKAER+NRDEFRKLME+HVA G L AKT WRDYC+K
Sbjct: 613 EQRKLRMEELRKAERKNRDEFRKLMEEHVAVGMLNAKTIWRDYCIKIKDIAAYQAISSNT 672
Query: 318 -------------------YLKDKARVKDAVKLKKV 268
YL DK+R++DAV++ ++
Sbjct: 673 SGSSAKDLFADVVDELDKQYLDDKSRIRDAVRMTEI 708