BLASTX nr result

ID: Panax25_contig00013634 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00013634
         (675 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017221278.1 PREDICTED: clathrin light chain 2-like [Daucus ca...    71   6e-11
XP_017219838.1 PREDICTED: clathrin light chain 1-like [Daucus ca...    60   4e-07
XP_017232124.1 PREDICTED: clathrin light chain 1-like [Daucus ca...    59   1e-06
XP_015066302.1 PREDICTED: clathrin light chain 1-like [Solanum p...    58   2e-06
XP_004232846.1 PREDICTED: clathrin light chain 1 [Solanum lycope...    58   2e-06
XP_006347068.1 PREDICTED: clathrin light chain 1-like [Solanum t...    57   4e-06

>XP_017221278.1 PREDICTED: clathrin light chain 2-like [Daucus carota subsp.
           sativus]
          Length = 306

 Score = 70.9 bits (172), Expect = 6e-11
 Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 15/76 (19%)
 Frame = +3

Query: 162 MSSSFDTYSIDGEDSTIPSSRPFDD---------------GYGFDDIL*IHVSHSVNSPD 296
           MSSSFDTYS+D +DS++PSSRPFDD                +  DD+   HVS    SPD
Sbjct: 1   MSSSFDTYSLDADDSSLPSSRPFDDDDYSYTAPPPQFGSGAFPDDDVTVDHVS----SPD 56

Query: 297 PYGFGLDPNPNYSESS 344
           P+GFG DPN  YSE++
Sbjct: 57  PFGFGSDPNAGYSEAA 72


>XP_017219838.1 PREDICTED: clathrin light chain 1-like [Daucus carota subsp.
           sativus] KZM87811.1 hypothetical protein DCAR_024912
           [Daucus carota subsp. sativus]
          Length = 285

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = +3

Query: 171 SFDTYSIDGED--STIPSSRPFDDGYGFDDIL*IHVSHSVNSPDPYGFGLDPNPNYSESS 344
           SFD+YSIDG+D  S  P  +     +  +D+   H SHS   PDPY F  DPNPN+SESS
Sbjct: 2   SFDSYSIDGDDFVSAAPPPQFGSGAFPDEDLTPDHASHS---PDPYSFTSDPNPNFSESS 58

Query: 345 TFGSS 359
            F SS
Sbjct: 59  QFDSS 63


>XP_017232124.1 PREDICTED: clathrin light chain 1-like [Daucus carota subsp.
           sativus] KZN07210.1 hypothetical protein DCAR_008047
           [Daucus carota subsp. sativus]
          Length = 269

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
 Frame = +3

Query: 162 MSSSFDTYSIDGEDS---TIPSSRPFDDGYGFDDIL*IHVSHSVNSPDPYGFGLDPNPNY 332
           MSSSFD ++ D ++S   T  SS    + +  D+I   HVSHSVN  D +GFG DPNP++
Sbjct: 1   MSSSFDAFAEDFDNSAYSTFSSSTAPVESFPDDEITADHVSHSVNGSDLFGFGADPNPSF 60

Query: 333 SESSTFGSS 359
           SES+  G++
Sbjct: 61  SESNGNGTA 69


>XP_015066302.1 PREDICTED: clathrin light chain 1-like [Solanum pennellii]
          Length = 329

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 24/104 (23%)
 Frame = +3

Query: 168 SSFDTYSIDGEDSTIPSSRPFDDG----------------------YG--FDDIL*IHVS 275
           ++FD +S+DGE     +S PFDDG                      +G  +D++   HVS
Sbjct: 2   AAFDAFSMDGEVPAPAASTPFDDGDYDGSYTAFSNADTPPFHGSGGFGGDYDEVTVEHVS 61

Query: 276 HSVNSPDPYGFGLDPNPNYSESSTFGSSKI*RMNSSSKFYLIWE 407
           H+V+SPDPYG+G D  PN  ++ +FG+S     N + K Y + E
Sbjct: 62  HTVDSPDPYGYGSDSFPN--QTGSFGASAAPISNGNGKPYDLGE 103


>XP_004232846.1 PREDICTED: clathrin light chain 1 [Solanum lycopersicum]
          Length = 329

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 24/104 (23%)
 Frame = +3

Query: 168 SSFDTYSIDGEDSTIPSSRPFDDG----------------------YG--FDDIL*IHVS 275
           ++FD +S+DGE     +S PFDDG                      +G  +D++   HVS
Sbjct: 2   AAFDAFSMDGEVPAPAASTPFDDGDYDGSYTAFSNADTPPFHGSGGFGGDYDEVTVEHVS 61

Query: 276 HSVNSPDPYGFGLDPNPNYSESSTFGSSKI*RMNSSSKFYLIWE 407
           H+V+SPDPYG+G D  PN  ++ +FG+S     N + K Y + E
Sbjct: 62  HTVDSPDPYGYGSDSFPN--QTGSFGASAAPISNGNGKPYDLGE 103


>XP_006347068.1 PREDICTED: clathrin light chain 1-like [Solanum tuberosum]
          Length = 330

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 24/104 (23%)
 Frame = +3

Query: 168 SSFDTYSIDGEDSTIPSSRPFDDG----------------------YG--FDDIL*IHVS 275
           ++FD +S+DGE     +S PFDDG                      +G  ++++   HVS
Sbjct: 2   AAFDAFSMDGEAPAPAASTPFDDGDYDGSYTAFSNADTPPFHGSGGFGGDYEEVTVEHVS 61

Query: 276 HSVNSPDPYGFGLDPNPNYSESSTFGSSKI*RMNSSSKFYLIWE 407
           H+V+SPDPYG+G D  PN ++S  FG+S     N + K Y + E
Sbjct: 62  HTVDSPDPYGYGSDSFPNQTDS--FGASGAPISNGNGKPYDLGE 103


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