BLASTX nr result

ID: Panax25_contig00013220 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00013220
         (373 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015081953.1 PREDICTED: translation initiation factor IF-2, ch...    65   6e-10
XP_006366769.1 PREDICTED: translation initiation factor IF-2, ch...    65   6e-10
XP_004243227.1 PREDICTED: translation initiation factor IF-2, ch...    65   6e-10
XP_017252384.1 PREDICTED: translation initiation factor IF-2, ch...    61   2e-08
XP_019249551.1 PREDICTED: translation initiation factor IF-2, ch...    61   3e-08
XP_009790742.1 PREDICTED: translation initiation factor IF-2, ch...    61   3e-08
XP_009601340.1 PREDICTED: translation initiation factor IF-2, ch...    61   3e-08
XP_019193404.1 PREDICTED: translation initiation factor IF-2, ch...    61   3e-08
KZM94316.1 hypothetical protein DCAR_017559 [Daucus carota subsp...    61   3e-08
CDP06122.1 unnamed protein product [Coffea canephora]                  60   5e-08

>XP_015081953.1 PREDICTED: translation initiation factor IF-2, chloroplastic
           [Solanum pennellii]
          Length = 1010

 Score = 65.5 bits (158), Expect = 6e-10
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -1

Query: 115 CTCSSGKFEGSLSLVRKVSISRNFGSFRKVWVGKRWRY 2
           C CSSG+FEGS SLVR+VS S+NFGS  ++W GKRWRY
Sbjct: 14  CGCSSGQFEGSFSLVRRVSFSKNFGSVNRIWGGKRWRY 51


>XP_006366769.1 PREDICTED: translation initiation factor IF-2, chloroplastic
           [Solanum tuberosum]
          Length = 1010

 Score = 65.5 bits (158), Expect = 6e-10
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -1

Query: 115 CTCSSGKFEGSLSLVRKVSISRNFGSFRKVWVGKRWRY 2
           C CSSG+FEGS SLVR+VS S+NFGS  ++W GKRWRY
Sbjct: 14  CGCSSGQFEGSFSLVRRVSFSKNFGSVNRIWGGKRWRY 51


>XP_004243227.1 PREDICTED: translation initiation factor IF-2, chloroplastic
           [Solanum lycopersicum]
          Length = 1010

 Score = 65.5 bits (158), Expect = 6e-10
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -1

Query: 115 CTCSSGKFEGSLSLVRKVSISRNFGSFRKVWVGKRWRY 2
           C CSSG+FEGS SLVR+VS S+NFGS  ++W GKRWRY
Sbjct: 14  CGCSSGQFEGSFSLVRRVSFSKNFGSVNRIWGGKRWRY 51


>XP_017252384.1 PREDICTED: translation initiation factor IF-2, chloroplastic-like
           [Daucus carota subsp. sativus]
          Length = 1030

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 30/54 (55%), Positives = 37/54 (68%)
 Frame = -1

Query: 163 SITMXXXXXXXXXXXACTCSSGKFEGSLSLVRKVSISRNFGSFRKVWVGKRWRY 2
           SI M            C+CSS +FEGSLS V +VS+S++FGSFRKV VG+RWRY
Sbjct: 4   SINMNSIASLVSLGSVCSCSSVQFEGSLSSVSRVSLSQSFGSFRKVKVGRRWRY 57


>XP_019249551.1 PREDICTED: translation initiation factor IF-2, chloroplastic
           [Nicotiana attenuata] OIT00266.1 translation initiation
           factor if-2, chloroplastic [Nicotiana attenuata]
          Length = 1011

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
 Frame = -1

Query: 115 CTCSSG-KFEGSLSLVRKVSISRNFGSFRKVWVGKRWRY 2
           C CSSG +FEGS SLVR+VS++ NF +F ++WVGKRWRY
Sbjct: 14  CGCSSGGQFEGSFSLVRRVSLANNFRNFNRIWVGKRWRY 52


>XP_009790742.1 PREDICTED: translation initiation factor IF-2, chloroplastic
           [Nicotiana sylvestris] XP_016514188.1 PREDICTED:
           translation initiation factor IF-2, chloroplastic-like
           [Nicotiana tabacum]
          Length = 1013

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
 Frame = -1

Query: 115 CTCSSG-KFEGSLSLVRKVSISRNFGSFRKVWVGKRWRY 2
           C CSSG +FEGS SLVR+VS++ NF +F ++WVGKRWRY
Sbjct: 14  CGCSSGGQFEGSFSLVRRVSLANNFRNFNRIWVGKRWRY 52


>XP_009601340.1 PREDICTED: translation initiation factor IF-2, chloroplastic
           [Nicotiana tomentosiformis] XP_016456731.1 PREDICTED:
           translation initiation factor IF-2, chloroplastic-like
           [Nicotiana tabacum]
          Length = 1013

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
 Frame = -1

Query: 115 CTCSSG-KFEGSLSLVRKVSISRNFGSFRKVWVGKRWRY 2
           C CSSG +FEGS SLVR+VS++ NF +F ++WVGKRWRY
Sbjct: 14  CGCSSGGQFEGSFSLVRRVSLANNFRNFNRIWVGKRWRY 52


>XP_019193404.1 PREDICTED: translation initiation factor IF-2, chloroplastic
           [Ipomoea nil]
          Length = 1020

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = -1

Query: 115 CTCSSGKFEGSLSLVRKVSISRNFGSFRKVWVGKRWRY 2
           C+CSSG+FEGS  LV  +S ++NF SFR++WVGKRW Y
Sbjct: 14  CSCSSGQFEGSSGLVGSISFAKNFRSFRRIWVGKRWPY 51


>KZM94316.1 hypothetical protein DCAR_017559 [Daucus carota subsp. sativus]
          Length = 1024

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = -1

Query: 115 CTCSSGKFEGSLSLVRKVSISRNFGSFRKVWVGKRWRY 2
           C+CSS +FEGSLS V +VS+S++FGSFRKV VG+RWRY
Sbjct: 14  CSCSSVQFEGSLSSVSRVSLSQSFGSFRKVKVGRRWRY 51


>CDP06122.1 unnamed protein product [Coffea canephora]
          Length = 1022

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = -1

Query: 115 CTCSSGKFEGSLSLVRKVSISRNFGSFRKVWVGKRWRY 2
           CTCSSGKFEGS SL+++VS SRN+ +  ++ VGKRWRY
Sbjct: 16  CTCSSGKFEGSFSLIKRVSYSRNYRASPRICVGKRWRY 53


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