BLASTX nr result

ID: Panax25_contig00013123 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00013123
         (576 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017231214.1 PREDICTED: U1 small nuclear ribonucleoprotein C-l...    61   3e-08

>XP_017231214.1 PREDICTED: U1 small nuclear ribonucleoprotein C-like [Daucus carota
           subsp. sativus] KZN06181.1 hypothetical protein
           DCAR_007018 [Daucus carota subsp. sativus]
          Length = 199

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 34/63 (53%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
 Frame = -1

Query: 576 GLPRPMTMNPPPMVXXXXXXXXXXXPMFAPAMYQSNP--AAPTSGGFDSSNMNTQTQASE 403
           G PRPM MNPPP+V             F P MYQ+NP   AP SGGFDSSN+N Q QA+E
Sbjct: 141 GAPRPMLMNPPPIVPGSAPASSAA---FTPVMYQANPNPVAP-SGGFDSSNVNAQPQAAE 196

Query: 402 GSH 394
             H
Sbjct: 197 SGH 199


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