BLASTX nr result

ID: Panax25_contig00012970 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00012970
         (839 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OMP02152.1 hypothetical protein COLO4_11302 [Corchorus olitorius]      57   8e-09
XP_017241878.1 PREDICTED: CRM-domain containing factor CFM3, chl...    63   2e-07
KZN03411.1 hypothetical protein DCAR_012167 [Daucus carota subsp...    63   2e-07

>OMP02152.1 hypothetical protein COLO4_11302 [Corchorus olitorius]
          Length = 643

 Score = 57.0 bits (136), Expect(2) = 8e-09
 Identities = 27/45 (60%), Positives = 36/45 (80%)
 Frame = +3

Query: 630 DWQC*TGGLIIMVSGSVMMVFRGSNFAGPSSRTESTDREGDNDFV 764
           D Q  TGGL++  SGSVM+V+RGSN+ GPSSR++S DREG+  F+
Sbjct: 70  DVQRRTGGLVLWRSGSVMVVYRGSNYEGPSSRSQSIDREGEALFI 114



 Score = 31.6 bits (70), Expect(2) = 8e-09
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 436 IDDQWRISELVGFQFHQMLVPDMK 507
           I D+WR  ELV  +FH++L  DMK
Sbjct: 24  IHDKWRKEELVRLKFHEVLAVDMK 47


>XP_017241878.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Daucus carota subsp.
           sativus]
          Length = 840

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +3

Query: 645 TGGLIIMVSGSVMMVFRGSNFAGPSSRTESTDREGDNDFV 764
           TGGL+I  SGSVMMV+RGSN+AGPSSR +ST REGD  FV
Sbjct: 269 TGGLVIWRSGSVMMVYRGSNYAGPSSRPQSTQREGDTLFV 308


>KZN03411.1 hypothetical protein DCAR_012167 [Daucus carota subsp. sativus]
          Length = 1266

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +3

Query: 645 TGGLIIMVSGSVMMVFRGSNFAGPSSRTESTDREGDNDFV 764
           TGGL+I  SGSVMMV+RGSN+AGPSSR +ST REGD  FV
Sbjct: 264 TGGLVIWRSGSVMMVYRGSNYAGPSSRPQSTQREGDTLFV 303


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