BLASTX nr result

ID: Panax25_contig00012554 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00012554
         (734 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM87022.1 hypothetical protein DCAR_024156 [Daucus carota subsp...    94   3e-18
XP_017218374.1 PREDICTED: uncharacterized protein LOC108195880 [...    94   3e-18
XP_017222347.1 PREDICTED: uncharacterized protein LOC108199113 [...    79   3e-13
KZM85363.1 hypothetical protein DCAR_027215 [Daucus carota subsp...    79   3e-13

>KZM87022.1 hypothetical protein DCAR_024156 [Daucus carota subsp. sativus]
          Length = 1840

 Score = 94.0 bits (232), Expect = 3e-18
 Identities = 69/160 (43%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
 Frame = +1

Query: 4    KDDENAAPIETSIQSNGGNVASDSHEVNEKVAYVQPVLDSSGETSGKNYTSQVNSENLTE 183
            K+D  A  I T    NGGNV  D HEV ++ AY +P++D          T+Q  SE+ +E
Sbjct: 1682 KEDVTAPRIIT--HKNGGNVVDDIHEVEQEAAYAEPLMDPFHRKFQMKNTAQAISEDPSE 1739

Query: 184  SSCRTDGIGKEANGNLEKFNQGDELGDAHE-DVKVAFIEPVLDSLSKTLVQNHT-QVLNE 357
             S  TD +G E  G+L+ +     +GDA E DVK++ I+P+++S   T V N T Q LNE
Sbjct: 1740 LSSATDVVGDEKKGDLKNY----IMGDAQEGDVKISSIKPIVESGCDTSVANSTCQALNE 1795

Query: 358  NLAESTSVSDESTIHVKSVSGHQSAIDMESELHV-ATEVA 474
            N  E+   SDE T  VKSVS      DM+S LHV ATEV+
Sbjct: 1796 N--ETGFTSDERTKDVKSVSSPLD--DMKSNLHVMATEVS 1831


>XP_017218374.1 PREDICTED: uncharacterized protein LOC108195880 [Daucus carota subsp.
            sativus]
          Length = 1844

 Score = 94.0 bits (232), Expect = 3e-18
 Identities = 69/160 (43%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
 Frame = +1

Query: 4    KDDENAAPIETSIQSNGGNVASDSHEVNEKVAYVQPVLDSSGETSGKNYTSQVNSENLTE 183
            K+D  A  I T    NGGNV  D HEV ++ AY +P++D          T+Q  SE+ +E
Sbjct: 1686 KEDVTAPRIIT--HKNGGNVVDDIHEVEQEAAYAEPLMDPFHRKFQMKNTAQAISEDPSE 1743

Query: 184  SSCRTDGIGKEANGNLEKFNQGDELGDAHE-DVKVAFIEPVLDSLSKTLVQNHT-QVLNE 357
             S  TD +G E  G+L+ +     +GDA E DVK++ I+P+++S   T V N T Q LNE
Sbjct: 1744 LSSATDVVGDEKKGDLKNY----IMGDAQEGDVKISSIKPIVESGCDTSVANSTCQALNE 1799

Query: 358  NLAESTSVSDESTIHVKSVSGHQSAIDMESELHV-ATEVA 474
            N  E+   SDE T  VKSVS      DM+S LHV ATEV+
Sbjct: 1800 N--ETGFTSDERTKDVKSVSSPLD--DMKSNLHVMATEVS 1835


>XP_017222347.1 PREDICTED: uncharacterized protein LOC108199113 [Daucus carota subsp.
            sativus]
          Length = 1737

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
 Frame = +1

Query: 4    KDDENAAPIETSIQSNGGNVASDSHEVNEKVAYVQPVLDSSGETSGKNYTSQVNSENLTE 183
            K  E+ A   T     GGNV +++  ++EKVA V+PV DS  +   +N  SQ   E   E
Sbjct: 1587 KTVEDLAANGTITMCEGGNVVNNTTAIDEKVAGVEPVTDSFSKAVAQNNMSQAIGEGPPE 1646

Query: 184  SSCRTDGIGKEANGNLEKFNQGDELGDAHE-DVKVAFIEPVLDSLSKTLVQNHTQVLNEN 360
            S   T  +  E NG+L   ++G ++GD  E DVKVA ++P+++  S T  +N+T      
Sbjct: 1647 SGSETVVVVDERNGDLINSDKGGDVGDVQEVDVKVASVDPIIE--SNTSAENNT------ 1698

Query: 361  LAESTSVSDESTIHVKSVSGHQSAIDMESELHVATEVASTAM 486
                    DES+ ++ S    +S +D++S+  V  EVAS  M
Sbjct: 1699 ----CQTLDESSKNMTSDPIDRSLVDVKSDSQVTPEVASNTM 1736


>KZM85363.1 hypothetical protein DCAR_027215 [Daucus carota subsp. sativus]
          Length = 1752

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
 Frame = +1

Query: 4    KDDENAAPIETSIQSNGGNVASDSHEVNEKVAYVQPVLDSSGETSGKNYTSQVNSENLTE 183
            K  E+ A   T     GGNV +++  ++EKVA V+PV DS  +   +N  SQ   E   E
Sbjct: 1602 KTVEDLAANGTITMCEGGNVVNNTTAIDEKVAGVEPVTDSFSKAVAQNNMSQAIGEGPPE 1661

Query: 184  SSCRTDGIGKEANGNLEKFNQGDELGDAHE-DVKVAFIEPVLDSLSKTLVQNHTQVLNEN 360
            S   T  +  E NG+L   ++G ++GD  E DVKVA ++P+++  S T  +N+T      
Sbjct: 1662 SGSETVVVVDERNGDLINSDKGGDVGDVQEVDVKVASVDPIIE--SNTSAENNT------ 1713

Query: 361  LAESTSVSDESTIHVKSVSGHQSAIDMESELHVATEVASTAM 486
                    DES+ ++ S    +S +D++S+  V  EVAS  M
Sbjct: 1714 ----CQTLDESSKNMTSDPIDRSLVDVKSDSQVTPEVASNTM 1751


Top