BLASTX nr result
ID: Panax25_contig00012424
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00012424
(416 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZM96771.1 hypothetical protein DCAR_015867 [Daucus carota subsp... 102 2e-22
XP_017246761.1 PREDICTED: CCR4-NOT transcription complex subunit... 102 2e-22
XP_017246760.1 PREDICTED: CCR4-NOT transcription complex subunit... 102 2e-22
XP_017218469.1 PREDICTED: CCR4-NOT transcription complex subunit... 90 3e-18
XP_017218468.1 PREDICTED: CCR4-NOT transcription complex subunit... 90 3e-18
KZM87992.1 hypothetical protein DCAR_025093 [Daucus carota subsp... 90 3e-18
XP_017218467.1 PREDICTED: CCR4-NOT transcription complex subunit... 90 3e-18
XP_017218466.1 PREDICTED: CCR4-NOT transcription complex subunit... 90 3e-18
XP_017218465.1 PREDICTED: CCR4-NOT transcription complex subunit... 90 3e-18
XP_017229704.1 PREDICTED: golgin candidate 6 [Daucus carota subs... 87 3e-17
GAV78700.1 Uso1_p115_head domain-containing protein/Uso1_p115_C ... 87 4e-17
XP_015879121.1 PREDICTED: golgin candidate 6-like [Ziziphus juju... 85 2e-16
XP_010108845.1 Golgin candidate 6 [Morus notabilis] EXC20360.1 G... 84 3e-16
XP_011469195.1 PREDICTED: CCR4-NOT transcription complex subunit... 84 4e-16
XP_011469194.1 PREDICTED: CCR4-NOT transcription complex subunit... 84 4e-16
XP_011469193.1 PREDICTED: CCR4-NOT transcription complex subunit... 84 4e-16
XP_016484445.1 PREDICTED: CCR4-NOT transcription complex subunit... 84 4e-16
XP_016484444.1 PREDICTED: CCR4-NOT transcription complex subunit... 84 4e-16
XP_009776945.1 PREDICTED: CCR4-NOT transcription complex subunit... 84 4e-16
XP_009631124.1 PREDICTED: CCR4-NOT transcription complex subunit... 84 4e-16
>KZM96771.1 hypothetical protein DCAR_015867 [Daucus carota subsp. sativus]
Length = 2302
Score = 102 bits (253), Expect = 2e-22
Identities = 54/76 (71%), Positives = 64/76 (84%), Gaps = 3/76 (3%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATSVASLSGLTVGKEN--RHSRDKK-VTGHSAASREEY 368
+LAAR GS ESLQQLV++ARNP+ S ASLSGL VGK++ RHSRD+K TG SAASREEY
Sbjct: 1784 KLAARPGSPESLQQLVEIARNPSASAASLSGLAVGKDDNLRHSRDRKQTTGLSAASREEY 1843
Query: 369 NVLDSMEPDPIGFHEQ 416
N+LDS+EPDP+GF Q
Sbjct: 1844 NLLDSVEPDPVGFRNQ 1859
>XP_017246761.1 PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X2
[Daucus carota subsp. sativus]
Length = 2401
Score = 102 bits (253), Expect = 2e-22
Identities = 54/76 (71%), Positives = 64/76 (84%), Gaps = 3/76 (3%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATSVASLSGLTVGKEN--RHSRDKK-VTGHSAASREEY 368
+LAAR GS ESLQQLV++ARNP+ S ASLSGL VGK++ RHSRD+K TG SAASREEY
Sbjct: 1803 KLAARPGSPESLQQLVEIARNPSASAASLSGLAVGKDDNLRHSRDRKQTTGLSAASREEY 1862
Query: 369 NVLDSMEPDPIGFHEQ 416
N+LDS+EPDP+GF Q
Sbjct: 1863 NLLDSVEPDPVGFRNQ 1878
>XP_017246760.1 PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X1
[Daucus carota subsp. sativus]
Length = 2403
Score = 102 bits (253), Expect = 2e-22
Identities = 54/76 (71%), Positives = 64/76 (84%), Gaps = 3/76 (3%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATSVASLSGLTVGKEN--RHSRDKK-VTGHSAASREEY 368
+LAAR GS ESLQQLV++ARNP+ S ASLSGL VGK++ RHSRD+K TG SAASREEY
Sbjct: 1805 KLAARPGSPESLQQLVEIARNPSASAASLSGLAVGKDDNLRHSRDRKQTTGLSAASREEY 1864
Query: 369 NVLDSMEPDPIGFHEQ 416
N+LDS+EPDP+GF Q
Sbjct: 1865 NLLDSVEPDPVGFRNQ 1880
>XP_017218469.1 PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X5
[Daucus carota subsp. sativus]
Length = 2252
Score = 89.7 bits (221), Expect = 3e-18
Identities = 49/76 (64%), Positives = 62/76 (81%), Gaps = 3/76 (3%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATSVASLSGLTVGKEN--RHSRDKK-VTGHSAASREEY 368
+LAAR GS ESLQ LV++ARNP+ +LS LTVGKE+ RHSRD+K +GHSAASREE+
Sbjct: 1660 KLAARPGSPESLQHLVEIARNPS----ALSDLTVGKEDNVRHSRDRKQASGHSAASREEF 1715
Query: 369 NVLDSMEPDPIGFHEQ 416
N+L S+EPDP+GF +Q
Sbjct: 1716 NLLGSVEPDPVGFRDQ 1731
>XP_017218468.1 PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X4
[Daucus carota subsp. sativus]
Length = 2316
Score = 89.7 bits (221), Expect = 3e-18
Identities = 49/76 (64%), Positives = 62/76 (81%), Gaps = 3/76 (3%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATSVASLSGLTVGKEN--RHSRDKK-VTGHSAASREEY 368
+LAAR GS ESLQ LV++ARNP+ +LS LTVGKE+ RHSRD+K +GHSAASREE+
Sbjct: 1724 KLAARPGSPESLQHLVEIARNPS----ALSDLTVGKEDNVRHSRDRKQASGHSAASREEF 1779
Query: 369 NVLDSMEPDPIGFHEQ 416
N+L S+EPDP+GF +Q
Sbjct: 1780 NLLGSVEPDPVGFRDQ 1795
>KZM87992.1 hypothetical protein DCAR_025093 [Daucus carota subsp. sativus]
Length = 2334
Score = 89.7 bits (221), Expect = 3e-18
Identities = 55/106 (51%), Positives = 72/106 (67%), Gaps = 14/106 (13%)
Frame = +3
Query: 141 SYVERLLDRISNGTLAEDRRLAARLGSLESLQQLVDVARNPATSVASLSGLTVGKEN--R 314
S + L+D ++ L D +LAAR GS ESLQ LV++ARNP+ +LS LTVGKE+ R
Sbjct: 1793 SELHHLVDALAK-YLNPDTQLAARPGSPESLQHLVEIARNPS----ALSDLTVGKEDNVR 1847
Query: 315 HSRDKKV------------TGHSAASREEYNVLDSMEPDPIGFHEQ 416
HSRD+KV +GHSAASREE+N+L S+EPDP+GF +Q
Sbjct: 1848 HSRDRKVPRIAISTIAWQASGHSAASREEFNLLGSVEPDPVGFRDQ 1893
>XP_017218467.1 PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X3
[Daucus carota subsp. sativus]
Length = 2378
Score = 89.7 bits (221), Expect = 3e-18
Identities = 49/76 (64%), Positives = 62/76 (81%), Gaps = 3/76 (3%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATSVASLSGLTVGKEN--RHSRDKK-VTGHSAASREEY 368
+LAAR GS ESLQ LV++ARNP+ +LS LTVGKE+ RHSRD+K +GHSAASREE+
Sbjct: 1786 KLAARPGSPESLQHLVEIARNPS----ALSDLTVGKEDNVRHSRDRKQASGHSAASREEF 1841
Query: 369 NVLDSMEPDPIGFHEQ 416
N+L S+EPDP+GF +Q
Sbjct: 1842 NLLGSVEPDPVGFRDQ 1857
>XP_017218466.1 PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X2
[Daucus carota subsp. sativus]
Length = 2383
Score = 89.7 bits (221), Expect = 3e-18
Identities = 49/76 (64%), Positives = 62/76 (81%), Gaps = 3/76 (3%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATSVASLSGLTVGKEN--RHSRDKK-VTGHSAASREEY 368
+LAAR GS ESLQ LV++ARNP+ +LS LTVGKE+ RHSRD+K +GHSAASREE+
Sbjct: 1791 KLAARPGSPESLQHLVEIARNPS----ALSDLTVGKEDNVRHSRDRKQASGHSAASREEF 1846
Query: 369 NVLDSMEPDPIGFHEQ 416
N+L S+EPDP+GF +Q
Sbjct: 1847 NLLGSVEPDPVGFRDQ 1862
>XP_017218465.1 PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X1
[Daucus carota subsp. sativus]
Length = 2385
Score = 89.7 bits (221), Expect = 3e-18
Identities = 49/76 (64%), Positives = 62/76 (81%), Gaps = 3/76 (3%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATSVASLSGLTVGKEN--RHSRDKK-VTGHSAASREEY 368
+LAAR GS ESLQ LV++ARNP+ +LS LTVGKE+ RHSRD+K +GHSAASREE+
Sbjct: 1793 KLAARPGSPESLQHLVEIARNPS----ALSDLTVGKEDNVRHSRDRKQASGHSAASREEF 1848
Query: 369 NVLDSMEPDPIGFHEQ 416
N+L S+EPDP+GF +Q
Sbjct: 1849 NLLGSVEPDPVGFRDQ 1864
>XP_017229704.1 PREDICTED: golgin candidate 6 [Daucus carota subsp. sativus]
KZN11963.1 hypothetical protein DCAR_004619 [Daucus
carota subsp. sativus]
Length = 897
Score = 87.0 bits (214), Expect = 3e-17
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = +3
Query: 66 MDLVSGYKGVVGRMFGNENFGSNEDSYVERLLDRISNGTLAEDRRLA 206
MDLVSGYKGVVGRMFGNEN GS+EDSYVERLLDRISNG LAEDRR A
Sbjct: 1 MDLVSGYKGVVGRMFGNENSGSSEDSYVERLLDRISNGVLAEDRRNA 47
>GAV78700.1 Uso1_p115_head domain-containing protein/Uso1_p115_C
domain-containing protein [Cephalotus follicularis]
Length = 915
Score = 86.7 bits (213), Expect = 4e-17
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = +3
Query: 66 MDLVSGYKGVVGRMFGNENFGSNEDSYVERLLDRISNGTLAEDRRLAARLGSLESLQQLV 245
MDLVSGYKGVVG +FGNEN SNEDSYVERLLDRISNGTLAEDRR+A + LQ +V
Sbjct: 1 MDLVSGYKGVVGLVFGNENSASNEDSYVERLLDRISNGTLAEDRRIA-----IAELQSVV 55
Query: 246 DVAR 257
+R
Sbjct: 56 AESR 59
>XP_015879121.1 PREDICTED: golgin candidate 6-like [Ziziphus jujuba] XP_015879122.1
PREDICTED: golgin candidate 6-like [Ziziphus jujuba]
Length = 915
Score = 84.7 bits (208), Expect = 2e-16
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +3
Query: 66 MDLVSGYKGVVGRMFGNENFGSNEDSYVERLLDRISNGTLAEDRRLA 206
MDLVSGYKGVVG +FGNEN GSNEDSY+ERLLDRISNG LAEDRR A
Sbjct: 1 MDLVSGYKGVVGLVFGNENSGSNEDSYIERLLDRISNGKLAEDRRTA 47
>XP_010108845.1 Golgin candidate 6 [Morus notabilis] EXC20360.1 Golgin candidate 6
[Morus notabilis]
Length = 923
Score = 84.0 bits (206), Expect = 3e-16
Identities = 54/131 (41%), Positives = 71/131 (54%), Gaps = 25/131 (19%)
Frame = +3
Query: 57 VREMDLVSGYKGVVGRMFGNENFGSNEDSYVERLLDRISNGTLAEDRRLA---------- 206
+ MDLVSGYKGVVG +FGNE+ GSNEDSYVERLLDRISNG LAEDRR A
Sbjct: 28 IGSMDLVSGYKGVVGLVFGNESSGSNEDSYVERLLDRISNGKLAEDRRNAMVELQSIVAE 87
Query: 207 --------------ARLGSLESLQQLVDVARNP-ATSVASLSGLTVGKENRHSRDKKVTG 341
+G L+ + V++ R T V++L+ + GK ++ + +
Sbjct: 88 SRAAQLAFGAMGFPVLMGVLKEERDDVEMVRGALETLVSALTPIDQGKSQKNEVEPALMN 147
Query: 342 HSAASREEYNV 374
SRE N+
Sbjct: 148 TDLLSREADNI 158
>XP_011469195.1 PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X3
[Fragaria vesca subsp. vesca]
Length = 2262
Score = 84.0 bits (206), Expect = 4e-16
Identities = 42/75 (56%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATSVASLSGLTVGKEN--RHSRDKKVTGHSAASREEYN 371
++AA+ GS ESLQQLV+ +NPA +VA+LSG+ VGK++ R SR+KK HS SREE++
Sbjct: 1658 KVAAKPGSPESLQQLVETIKNPAANVAALSGINVGKDDKARQSREKKAPVHSPGSREEFS 1717
Query: 372 VLDSMEPDPIGFHEQ 416
+++S EPDP GF EQ
Sbjct: 1718 IVESAEPDPPGFPEQ 1732
>XP_011469194.1 PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X2
[Fragaria vesca subsp. vesca]
Length = 2398
Score = 84.0 bits (206), Expect = 4e-16
Identities = 42/75 (56%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATSVASLSGLTVGKEN--RHSRDKKVTGHSAASREEYN 371
++AA+ GS ESLQQLV+ +NPA +VA+LSG+ VGK++ R SR+KK HS SREE++
Sbjct: 1795 KVAAKPGSPESLQQLVETIKNPAANVAALSGINVGKDDKARQSREKKAPVHSPGSREEFS 1854
Query: 372 VLDSMEPDPIGFHEQ 416
+++S EPDP GF EQ
Sbjct: 1855 IVESAEPDPPGFPEQ 1869
>XP_011469193.1 PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X1
[Fragaria vesca subsp. vesca]
Length = 2399
Score = 84.0 bits (206), Expect = 4e-16
Identities = 42/75 (56%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATSVASLSGLTVGKEN--RHSRDKKVTGHSAASREEYN 371
++AA+ GS ESLQQLV+ +NPA +VA+LSG+ VGK++ R SR+KK HS SREE++
Sbjct: 1795 KVAAKPGSPESLQQLVETIKNPAANVAALSGINVGKDDKARQSREKKAPVHSPGSREEFS 1854
Query: 372 VLDSMEPDPIGFHEQ 416
+++S EPDP GF EQ
Sbjct: 1855 IVESAEPDPPGFPEQ 1869
>XP_016484445.1 PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X3
[Nicotiana tabacum]
Length = 2416
Score = 84.0 bits (206), Expect = 4e-16
Identities = 43/76 (56%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATS-VASLSGLTVGKE--NRHSRDKKVTGHSAASREEY 368
++AAR GS ESLQQLV++A+NPA + A+LS +T GKE N+ SRDKK+ G + +RE+Y
Sbjct: 1810 KIAARPGSPESLQQLVEIAKNPAAANAATLSSVTFGKEDSNKQSRDKKIAGPATGTREDY 1869
Query: 369 NVLDSMEPDPIGFHEQ 416
V +S+EPDP GF EQ
Sbjct: 1870 GVSESVEPDPAGFREQ 1885
>XP_016484444.1 PREDICTED: CCR4-NOT transcription complex subunit 1-like isoform X2
[Nicotiana tabacum]
Length = 2416
Score = 84.0 bits (206), Expect = 4e-16
Identities = 43/76 (56%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATS-VASLSGLTVGKE--NRHSRDKKVTGHSAASREEY 368
++AAR GS ESLQQLV++A+NPA + A+LS +T GKE N+ SRDKK+ G + +RE+Y
Sbjct: 1808 KIAARPGSPESLQQLVEIAKNPAAANAATLSSVTFGKEDSNKQSRDKKIAGPATGTREDY 1867
Query: 369 NVLDSMEPDPIGFHEQ 416
V +S+EPDP GF EQ
Sbjct: 1868 GVSESVEPDPAGFREQ 1883
>XP_009776945.1 PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X2
[Nicotiana sylvestris]
Length = 2416
Score = 84.0 bits (206), Expect = 4e-16
Identities = 43/76 (56%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATS-VASLSGLTVGKE--NRHSRDKKVTGHSAASREEY 368
++AAR GS ESLQQLV++A+NPA + A+LS +T GKE N+ SRDKK+ G + +RE+Y
Sbjct: 1808 KIAARPGSPESLQQLVEIAKNPAAANAATLSSVTFGKEDSNKQSRDKKIAGPATGTREDY 1867
Query: 369 NVLDSMEPDPIGFHEQ 416
V +S+EPDP GF EQ
Sbjct: 1868 GVSESVEPDPAGFREQ 1883
>XP_009631124.1 PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X2
[Nicotiana tomentosiformis]
Length = 2416
Score = 84.0 bits (206), Expect = 4e-16
Identities = 43/76 (56%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
Frame = +3
Query: 198 RLAARLGSLESLQQLVDVARNPATS-VASLSGLTVGKE--NRHSRDKKVTGHSAASREEY 368
++AAR GS ESLQQLV++A+NPA + A+LS +T GKE N+ SRDKK+ G + +RE+Y
Sbjct: 1808 KIAARPGSPESLQQLVEIAKNPAAANAAALSSVTFGKEDSNKQSRDKKIAGPATGTREDY 1867
Query: 369 NVLDSMEPDPIGFHEQ 416
V +S+EPDP GF EQ
Sbjct: 1868 GVSESVEPDPAGFREQ 1883