BLASTX nr result

ID: Panax25_contig00011975 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00011975
         (806 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006485864.2 PREDICTED: pentatricopeptide repeat-containing pr...    60   1e-06
KDO42602.1 hypothetical protein CISIN_1g044775mg [Citrus sinensis]     60   1e-06
XP_006436291.1 hypothetical protein CICLE_v10033724mg, partial [...    60   1e-06
JAU07629.1 Putative pentatricopeptide repeat-containing protein,...    55   5e-06
KCW60575.1 hypothetical protein EUGRSUZ_H03306 [Eucalyptus grandis]    57   9e-06
XP_015570529.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   1e-05
XP_010024144.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   1e-05

>XP_006485864.2 PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Citrus sinensis]
          Length = 482

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +2

Query: 461 IDLLGRAGQLSEAELLIESMPMKADASTWGSLLGA 565
           +DLLGRAGQ+SEAE LIE+MPM+ DAS WGSLLGA
Sbjct: 254 VDLLGRAGQVSEAEKLIENMPMEPDASLWGSLLGA 288


>KDO42602.1 hypothetical protein CISIN_1g044775mg [Citrus sinensis]
          Length = 552

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +2

Query: 461 IDLLGRAGQLSEAELLIESMPMKADASTWGSLLGA 565
           +DLLGRAGQ+SEAE LIE+MPM+ DAS WGSLLGA
Sbjct: 345 VDLLGRAGQVSEAEKLIENMPMEPDASLWGSLLGA 379


>XP_006436291.1 hypothetical protein CICLE_v10033724mg, partial [Citrus clementina]
           ESR49531.1 hypothetical protein CICLE_v10033724mg,
           partial [Citrus clementina]
          Length = 580

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +2

Query: 461 IDLLGRAGQLSEAELLIESMPMKADASTWGSLLGA 565
           +DLLGRAGQ+SEAE LIE+MPM+ DAS WGSLLGA
Sbjct: 352 VDLLGRAGQVSEAEKLIENMPMEPDASLWGSLLGA 386


>JAU07629.1 Putative pentatricopeptide repeat-containing protein, partial
           [Noccaea caerulescens]
          Length = 123

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 25/44 (56%), Positives = 33/44 (75%)
 Frame = +2

Query: 434 DVNNCDVKTIDLLGRAGQLSEAELLIESMPMKADASTWGSLLGA 565
           D+ NC    +DLLGRAG++ EA  L+E+MP K D STWG++LGA
Sbjct: 12  DIYNC---VVDLLGRAGKIGEAYELVETMPFKPDESTWGAILGA 52


>KCW60575.1 hypothetical protein EUGRSUZ_H03306 [Eucalyptus grandis]
          Length = 641

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 461 IDLLGRAGQLSEAELLIESMPMKADASTWGSLLGA 565
           +DLLGRAG+L EAE LIESMPM  D STWG+LLGA
Sbjct: 413 VDLLGRAGKLKEAEELIESMPMAPDVSTWGALLGA 447


>XP_015570529.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Ricinus communis]
          Length = 797

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 461 IDLLGRAGQLSEAELLIESMPMKADASTWGSLLGA 565
           +DLLGRAG L EAE LIE+MPM  DASTWG+LLGA
Sbjct: 569 VDLLGRAGMLKEAEELIENMPMAPDASTWGALLGA 603


>XP_010024144.1 PREDICTED: pentatricopeptide repeat-containing protein At3g62890
           [Eucalyptus grandis] XP_010024145.1 PREDICTED:
           pentatricopeptide repeat-containing protein At3g62890
           [Eucalyptus grandis] XP_010024147.1 PREDICTED:
           pentatricopeptide repeat-containing protein At3g62890
           [Eucalyptus grandis]
          Length = 797

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 461 IDLLGRAGQLSEAELLIESMPMKADASTWGSLLGA 565
           +DLLGRAG+L EAE LIESMPM  D STWG+LLGA
Sbjct: 569 VDLLGRAGKLKEAEELIESMPMAPDVSTWGALLGA 603


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