BLASTX nr result
ID: Panax25_contig00011608
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00011608
(1439 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_012091573.1 PREDICTED: mediator of RNA polymerase II transcri... 132 5e-29
XP_018820164.1 PREDICTED: mediator of RNA polymerase II transcri... 129 3e-28
XP_018820161.1 PREDICTED: mediator of RNA polymerase II transcri... 129 4e-28
XP_015574599.1 PREDICTED: mediator of RNA polymerase II transcri... 128 8e-28
XP_002519035.1 PREDICTED: mediator of RNA polymerase II transcri... 128 9e-28
XP_017221194.1 PREDICTED: mediator of RNA polymerase II transcri... 127 2e-27
KZM84481.1 hypothetical protein DCAR_028097 [Daucus carota subsp... 127 2e-27
XP_019237179.1 PREDICTED: mediator of RNA polymerase II transcri... 127 2e-27
GAV74432.1 DUF974 domain-containing protein, partial [Cephalotus... 127 2e-27
XP_019074150.1 PREDICTED: mediator of RNA polymerase II transcri... 124 3e-27
CBI14793.3 unnamed protein product, partial [Vitis vinifera] 124 3e-27
XP_015890204.1 PREDICTED: mediator of RNA polymerase II transcri... 125 5e-27
XP_010100550.1 hypothetical protein L484_012106 [Morus notabilis... 125 6e-27
XP_009596704.1 PREDICTED: mediator of RNA polymerase II transcri... 125 9e-27
XP_017978680.1 PREDICTED: mediator of RNA polymerase II transcri... 125 9e-27
KDO75885.1 hypothetical protein CISIN_1g0008482mg, partial [Citr... 122 1e-26
XP_010647227.1 PREDICTED: mediator of RNA polymerase II transcri... 124 1e-26
EOY28294.1 Sensitive to freezing 6 [Theobroma cacao] 124 1e-26
OAY24787.1 hypothetical protein MANES_17G043400 [Manihot esculenta] 124 1e-26
XP_008383773.1 PREDICTED: LOW QUALITY PROTEIN: mediator of RNA p... 122 5e-26
>XP_012091573.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Jatropha curcas] KDP20944.1 hypothetical
protein JCGZ_21415 [Jatropha curcas]
Length = 1249
Score = 132 bits (331), Expect = 5e-29
Identities = 68/89 (76%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = -3
Query: 1308 EAAAKGC-SDKPEFIGSGEEEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSVP 1132
E AK S+KPE + S EEE +E+P+D PM+EDSM ATVFCIRLKQPRSNL H+MSVP
Sbjct: 27 EIVAKAAGSEKPEPVSS-EEESVEKPDD-PMEEDSMSPATVFCIRLKQPRSNLQHKMSVP 84
Query: 1131 ELCRKFSAVAWCGKLNAIACASETCARIP 1045
ELCR FSAVAWCGKLNAIACASETCARIP
Sbjct: 85 ELCRNFSAVAWCGKLNAIACASETCARIP 113
>XP_018820164.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X3 [Juglans regia]
Length = 1020
Score = 129 bits (324), Expect = 3e-28
Identities = 64/85 (75%), Positives = 71/85 (83%)
Frame = -3
Query: 1299 AKGCSDKPEFIGSGEEEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSVPELCR 1120
+KG D E S EE+ +E+P+D PMDEDS+ ATVFCIRLKQPRSNL H+MSVPELCR
Sbjct: 23 SKGAEDT-EPAASAEEDAVEKPDD-PMDEDSVSPATVFCIRLKQPRSNLQHKMSVPELCR 80
Query: 1119 KFSAVAWCGKLNAIACASETCARIP 1045
FSAVAWCGKLNAIACASETCARIP
Sbjct: 81 NFSAVAWCGKLNAIACASETCARIP 105
>XP_018820161.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Juglans regia] XP_018820162.1 PREDICTED:
mediator of RNA polymerase II transcription subunit 16
isoform X1 [Juglans regia]
Length = 1239
Score = 129 bits (324), Expect = 4e-28
Identities = 64/85 (75%), Positives = 71/85 (83%)
Frame = -3
Query: 1299 AKGCSDKPEFIGSGEEEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSVPELCR 1120
+KG D E S EE+ +E+P+D PMDEDS+ ATVFCIRLKQPRSNL H+MSVPELCR
Sbjct: 23 SKGAEDT-EPAASAEEDAVEKPDD-PMDEDSVSPATVFCIRLKQPRSNLQHKMSVPELCR 80
Query: 1119 KFSAVAWCGKLNAIACASETCARIP 1045
FSAVAWCGKLNAIACASETCARIP
Sbjct: 81 NFSAVAWCGKLNAIACASETCARIP 105
>XP_015574599.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Ricinus communis]
Length = 1083
Score = 128 bits (321), Expect = 8e-28
Identities = 67/90 (74%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
Frame = -3
Query: 1308 EAAAKGC-SDKPEFIG-SGEEEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSV 1135
E AKG SDKP S EE+ +E+P+D PM+EDS+ ATVFCIRLKQPRSNL H+MSV
Sbjct: 32 EIVAKGAGSDKPAGEPVSSEEDSVEKPDD-PMEEDSVSPATVFCIRLKQPRSNLQHKMSV 90
Query: 1134 PELCRKFSAVAWCGKLNAIACASETCARIP 1045
PELCR FSAVAWCGKLNAIACASETCARIP
Sbjct: 91 PELCRNFSAVAWCGKLNAIACASETCARIP 120
>XP_002519035.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Ricinus communis] EEF43246.1 conserved
hypothetical protein [Ricinus communis]
Length = 1255
Score = 128 bits (321), Expect = 9e-28
Identities = 67/90 (74%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
Frame = -3
Query: 1308 EAAAKGC-SDKPEFIG-SGEEEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSV 1135
E AKG SDKP S EE+ +E+P+D PM+EDS+ ATVFCIRLKQPRSNL H+MSV
Sbjct: 32 EIVAKGAGSDKPAGEPVSSEEDSVEKPDD-PMEEDSVSPATVFCIRLKQPRSNLQHKMSV 90
Query: 1134 PELCRKFSAVAWCGKLNAIACASETCARIP 1045
PELCR FSAVAWCGKLNAIACASETCARIP
Sbjct: 91 PELCRNFSAVAWCGKLNAIACASETCARIP 120
>XP_017221194.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Daucus carota subsp. sativus]
Length = 1258
Score = 127 bits (319), Expect = 2e-27
Identities = 62/80 (77%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Frame = -3
Query: 1281 KPEFIGSGEEEVLERPEDNPMDEDS-MKSATVFCIRLKQPRSNLLHRMSVPELCRKFSAV 1105
K E G GEEE + D+PM+ED+ K+A VFCIRLKQPRSNLLH+MSVPELCRKFSAV
Sbjct: 46 KLESQGGGEEEAAQMKSDDPMEEDAEAKAAVVFCIRLKQPRSNLLHKMSVPELCRKFSAV 105
Query: 1104 AWCGKLNAIACASETCARIP 1045
AWCGKLNAIACASETCARIP
Sbjct: 106 AWCGKLNAIACASETCARIP 125
>KZM84481.1 hypothetical protein DCAR_028097 [Daucus carota subsp. sativus]
Length = 1268
Score = 127 bits (319), Expect = 2e-27
Identities = 62/80 (77%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Frame = -3
Query: 1281 KPEFIGSGEEEVLERPEDNPMDEDS-MKSATVFCIRLKQPRSNLLHRMSVPELCRKFSAV 1105
K E G GEEE + D+PM+ED+ K+A VFCIRLKQPRSNLLH+MSVPELCRKFSAV
Sbjct: 46 KLESQGGGEEEAAQMKSDDPMEEDAEAKAAVVFCIRLKQPRSNLLHKMSVPELCRKFSAV 105
Query: 1104 AWCGKLNAIACASETCARIP 1045
AWCGKLNAIACASETCARIP
Sbjct: 106 AWCGKLNAIACASETCARIP 125
>XP_019237179.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Nicotiana attenuata] OIT22596.1 mediator of
rna polymerase ii transcription subunit 16 [Nicotiana
attenuata]
Length = 1240
Score = 127 bits (318), Expect = 2e-27
Identities = 70/117 (59%), Positives = 77/117 (65%), Gaps = 9/117 (7%)
Frame = -3
Query: 1368 VAAKDXXXXXXXXXXXXTPFEAAAKGCSDKPEF---------IGSGEEEVLERPEDNPMD 1216
VA KD EA+ K DKP+ I + E+EV D+PMD
Sbjct: 12 VAVKDSEEESSSAITTTNSLEASIK-VQDKPDTGEDDHPGTAIVATEKEVSSVDNDDPMD 70
Query: 1215 EDSMKSATVFCIRLKQPRSNLLHRMSVPELCRKFSAVAWCGKLNAIACASETCARIP 1045
EDS+ ATVFCIRLKQPRSNLLH+MSVPELCR FSAVAWCGKLNAIACASETCARIP
Sbjct: 71 EDSVNPATVFCIRLKQPRSNLLHKMSVPELCRNFSAVAWCGKLNAIACASETCARIP 127
>GAV74432.1 DUF974 domain-containing protein, partial [Cephalotus follicularis]
Length = 1609
Score = 127 bits (318), Expect = 2e-27
Identities = 62/80 (77%), Positives = 67/80 (83%)
Frame = -3
Query: 1284 DKPEFIGSGEEEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSVPELCRKFSAV 1105
+K E +G GE EV + ED PMDEDS+ ATVFCIRLKQPRSNL H+MSVPELCR FSAV
Sbjct: 60 EKAEAVGCGEAEVPKNTED-PMDEDSVGPATVFCIRLKQPRSNLQHKMSVPELCRNFSAV 118
Query: 1104 AWCGKLNAIACASETCARIP 1045
WCGKLNAIACASETCARIP
Sbjct: 119 TWCGKLNAIACASETCARIP 138
>XP_019074150.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16,
partial [Vitis vinifera]
Length = 509
Score = 124 bits (312), Expect = 3e-27
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = -3
Query: 1254 EEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSVPELCRKFSAVAWCGKLNAIA 1075
E+V+E+ D+PM+EDS+ ATVFCIRLKQPRSNL H+MSVPELCR FSAVAWCGKLNAIA
Sbjct: 45 EQVVEKTADDPMEEDSVNPATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIA 104
Query: 1074 CASETCARIP 1045
CASETCARIP
Sbjct: 105 CASETCARIP 114
>CBI14793.3 unnamed protein product, partial [Vitis vinifera]
Length = 513
Score = 124 bits (312), Expect = 3e-27
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = -3
Query: 1254 EEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSVPELCRKFSAVAWCGKLNAIA 1075
E+V+E+ D+PM+EDS+ ATVFCIRLKQPRSNL H+MSVPELCR FSAVAWCGKLNAIA
Sbjct: 45 EQVVEKTADDPMEEDSVNPATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIA 104
Query: 1074 CASETCARIP 1045
CASETCARIP
Sbjct: 105 CASETCARIP 114
>XP_015890204.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Ziziphus jujuba]
Length = 1239
Score = 125 bits (315), Expect = 5e-27
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = -3
Query: 1287 SDKPEFIGSGEEEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSVPELCRKFSA 1108
SDK E + S +E +E+P D PM+EDS+ ATVFCIRLKQPRSNL+H+MSVPELCR FSA
Sbjct: 26 SDKAETL-SPDEVAVEKPND-PMEEDSVSPATVFCIRLKQPRSNLMHKMSVPELCRNFSA 83
Query: 1107 VAWCGKLNAIACASETCARIP 1045
VAWCGKLNAIACASETCARIP
Sbjct: 84 VAWCGKLNAIACASETCARIP 104
>XP_010100550.1 hypothetical protein L484_012106 [Morus notabilis] EXB82793.1
hypothetical protein L484_012106 [Morus notabilis]
Length = 1003
Score = 125 bits (314), Expect = 6e-27
Identities = 60/88 (68%), Positives = 69/88 (78%)
Frame = -3
Query: 1308 EAAAKGCSDKPEFIGSGEEEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSVPE 1129
E AA+ D + +E+ +E P +PM+EDS+ A VFCIRLKQPRSNLLH+MSVPE
Sbjct: 16 EPAAQSLEDSDK--ADADEDAVETPAGDPMEEDSVSPAAVFCIRLKQPRSNLLHKMSVPE 73
Query: 1128 LCRKFSAVAWCGKLNAIACASETCARIP 1045
LCR FSAVAWCGKLNAIACASETCARIP
Sbjct: 74 LCRNFSAVAWCGKLNAIACASETCARIP 101
>XP_009596704.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Nicotiana tomentosiformis]
Length = 1247
Score = 125 bits (313), Expect = 9e-27
Identities = 69/117 (58%), Positives = 77/117 (65%), Gaps = 9/117 (7%)
Frame = -3
Query: 1368 VAAKDXXXXXXXXXXXXTPFEAAAKGCSDKPEF---------IGSGEEEVLERPEDNPMD 1216
VA KD EA+ K DKP+ I + E+EV D+PM+
Sbjct: 12 VAVKDSEEESSSAITTTNSLEASNK-VQDKPDTGEDDHPRAAIVATEKEVSSVDNDDPME 70
Query: 1215 EDSMKSATVFCIRLKQPRSNLLHRMSVPELCRKFSAVAWCGKLNAIACASETCARIP 1045
EDS+ ATVFCIRLKQPRSNLLH+MSVPELCR FSAVAWCGKLNAIACASETCARIP
Sbjct: 71 EDSVNPATVFCIRLKQPRSNLLHKMSVPELCRNFSAVAWCGKLNAIACASETCARIP 127
>XP_017978680.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Theobroma cacao]
Length = 1249
Score = 125 bits (313), Expect = 9e-27
Identities = 63/95 (66%), Positives = 74/95 (77%), Gaps = 7/95 (7%)
Frame = -3
Query: 1308 EAAAKGCSDKPEFIG----SGEEEVL---ERPEDNPMDEDSMKSATVFCIRLKQPRSNLL 1150
++ K DKP + +GE+EV+ E+ ED PM++DS+ ATVFCIRLKQPRSNL
Sbjct: 24 DSTVKTGPDKPVALEPVAVTGEDEVVTSSEKTEDTPMEDDSVNPATVFCIRLKQPRSNLQ 83
Query: 1149 HRMSVPELCRKFSAVAWCGKLNAIACASETCARIP 1045
H+MSVPELCR FSAVAWCGKLNAIACASETCARIP
Sbjct: 84 HKMSVPELCRNFSAVAWCGKLNAIACASETCARIP 118
>KDO75885.1 hypothetical protein CISIN_1g0008482mg, partial [Citrus sinensis]
KDO75886.1 hypothetical protein CISIN_1g0008482mg,
partial [Citrus sinensis] KDO75887.1 hypothetical protein
CISIN_1g0008482mg, partial [Citrus sinensis] KDO75888.1
hypothetical protein CISIN_1g0008482mg, partial [Citrus
sinensis] KDO75889.1 hypothetical protein
CISIN_1g0008482mg, partial [Citrus sinensis]
Length = 452
Score = 122 bits (306), Expect = 1e-26
Identities = 63/92 (68%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
Frame = -3
Query: 1314 PFEAAAKGCSDKPEFIGSGE--EEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRM 1141
P E K DK + + S EE D+PMDEDS+ ATVFCIRLKQPRSNL H+M
Sbjct: 32 PVETVIK--PDKSDTLSSAAAAEEEASAKSDDPMDEDSVTPATVFCIRLKQPRSNLQHKM 89
Query: 1140 SVPELCRKFSAVAWCGKLNAIACASETCARIP 1045
SVPELCR FSAVAWCGKLNAIACASETCARIP
Sbjct: 90 SVPELCRNFSAVAWCGKLNAIACASETCARIP 121
>XP_010647227.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Vitis vinifera]
Length = 1246
Score = 124 bits (312), Expect = 1e-26
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = -3
Query: 1254 EEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSVPELCRKFSAVAWCGKLNAIA 1075
E+V+E+ D+PM+EDS+ ATVFCIRLKQPRSNL H+MSVPELCR FSAVAWCGKLNAIA
Sbjct: 45 EQVVEKTADDPMEEDSVNPATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIA 104
Query: 1074 CASETCARIP 1045
CASETCARIP
Sbjct: 105 CASETCARIP 114
>EOY28294.1 Sensitive to freezing 6 [Theobroma cacao]
Length = 1249
Score = 124 bits (312), Expect = 1e-26
Identities = 59/76 (77%), Positives = 67/76 (88%), Gaps = 3/76 (3%)
Frame = -3
Query: 1263 SGEEEVL---ERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSVPELCRKFSAVAWCG 1093
+GE+EV+ E+ ED PM++DS+ ATVFCIRLKQPRSNL H+MSVPELCR FSAVAWCG
Sbjct: 43 TGEDEVVTSSEKTEDTPMEDDSVNPATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCG 102
Query: 1092 KLNAIACASETCARIP 1045
KLNAIACASETCARIP
Sbjct: 103 KLNAIACASETCARIP 118
>OAY24787.1 hypothetical protein MANES_17G043400 [Manihot esculenta]
Length = 1251
Score = 124 bits (312), Expect = 1e-26
Identities = 65/89 (73%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Frame = -3
Query: 1308 EAAAKGC-SDKPEFIGSGEEEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSVP 1132
E AK SDK E + S EEE +E+P+D PM+EDS+ ATVFCIRLKQPRSNL ++MSVP
Sbjct: 34 EIVAKAAGSDKAEPLSS-EEESVEKPDD-PMEEDSVSPATVFCIRLKQPRSNLQYKMSVP 91
Query: 1131 ELCRKFSAVAWCGKLNAIACASETCARIP 1045
ELCR FSAV WCGKLNAIACASETCARIP
Sbjct: 92 ELCRNFSAVTWCGKLNAIACASETCARIP 120
>XP_008383773.1 PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 16 [Malus domestica]
Length = 1239
Score = 122 bits (307), Expect = 5e-26
Identities = 63/88 (71%), Positives = 70/88 (79%), Gaps = 8/88 (9%)
Frame = -3
Query: 1284 DKPEF-----IGSGE---EEVLERPEDNPMDEDSMKSATVFCIRLKQPRSNLLHRMSVPE 1129
DKPE IG GE E+ +++P+D PMDED+ A VFCIRLKQPRSNL H+MSVPE
Sbjct: 19 DKPETGSVESIGGGEIEEEDPVDKPDD-PMDEDAASPAAVFCIRLKQPRSNLQHKMSVPE 77
Query: 1128 LCRKFSAVAWCGKLNAIACASETCARIP 1045
LCR FSAVAWCGKLNAIACASETCARIP
Sbjct: 78 LCRNFSAVAWCGKLNAIACASETCARIP 105