BLASTX nr result
ID: Panax25_contig00011409
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00011409
(1328 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010653775.1 PREDICTED: pentatricopeptide repeat-containing pr... 101 4e-21
XP_011075330.1 PREDICTED: pentatricopeptide repeat-containing pr... 99 1e-20
XP_019232035.1 PREDICTED: pentatricopeptide repeat-containing pr... 96 4e-20
XP_009778941.1 PREDICTED: pentatricopeptide repeat-containing pr... 96 4e-20
XP_009617024.2 PREDICTED: pentatricopeptide repeat-containing pr... 96 4e-20
XP_016479023.1 PREDICTED: pentatricopeptide repeat-containing pr... 96 4e-20
XP_019232036.1 PREDICTED: pentatricopeptide repeat-containing pr... 96 4e-20
XP_016479024.1 PREDICTED: pentatricopeptide repeat-containing pr... 96 4e-20
XP_010672859.1 PREDICTED: pentatricopeptide repeat-containing pr... 100 5e-20
XP_010672860.1 PREDICTED: pentatricopeptide repeat-containing pr... 100 5e-20
XP_010247509.1 PREDICTED: pentatricopeptide repeat-containing pr... 100 5e-20
XP_010247510.1 PREDICTED: pentatricopeptide repeat-containing pr... 100 5e-20
XP_019104222.1 PREDICTED: pentatricopeptide repeat-containing pr... 100 5e-20
KVH94780.1 Pentatricopeptide repeat-containing protein [Cynara c... 102 5e-20
XP_010247511.1 PREDICTED: pentatricopeptide repeat-containing pr... 100 5e-20
XP_019104223.1 PREDICTED: pentatricopeptide repeat-containing pr... 100 5e-20
XP_019104224.1 PREDICTED: pentatricopeptide repeat-containing pr... 100 5e-20
XP_019166094.1 PREDICTED: pentatricopeptide repeat-containing pr... 99 9e-20
XP_010672862.1 PREDICTED: pentatricopeptide repeat-containing pr... 100 9e-20
KMT15038.1 hypothetical protein BVRB_3g061610 isoform B [Beta vu... 100 9e-20
>XP_010653775.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
[Vitis vinifera] CBI29835.3 unnamed protein product,
partial [Vitis vinifera]
Length = 852
Score = 101 bits (251), Expect(2) = 4e-21
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKWRCKPDAETYNALI+ HGR+GQWRWAMNIM+DMLRAA
Sbjct: 180 QARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 227
Score = 30.0 bits (66), Expect(2) = 4e-21
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
REI Q+GS+EHS+QVF
Sbjct: 134 REITQIGSLEHSVQVF 149
>XP_011075330.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
[Sesamum indicum]
Length = 847
Score = 98.6 bits (244), Expect(2) = 1e-20
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKWRCKPDA+TYNALI+ HGR+GQWRW +NIMEDMLRAA
Sbjct: 170 QARGLFFEMQKWRCKPDADTYNALINAHGRAGQWRWGLNIMEDMLRAA 217
Score = 30.8 bits (68), Expect(2) = 1e-20
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
REI MGSIEHSIQVF
Sbjct: 124 REITNMGSIEHSIQVF 139
>XP_019232035.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
isoform X1 [Nicotiana attenuata] OIT28316.1
pentatricopeptide repeat-containing protein [Nicotiana
attenuata]
Length = 831
Score = 96.3 bits (238), Expect(2) = 4e-20
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKWRC+P+ ETYNALIS HGR+GQWRWA NIMEDMLRAA
Sbjct: 173 QARGLFFEMQKWRCQPNVETYNALISAHGRAGQWRWAKNIMEDMLRAA 220
Score = 31.6 bits (70), Expect(2) = 4e-20
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
+EI QMGSIEHSIQVF
Sbjct: 127 KEITQMGSIEHSIQVF 142
>XP_009778941.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
[Nicotiana sylvestris] XP_016441210.1 PREDICTED:
pentatricopeptide repeat-containing protein
At2g41720-like [Nicotiana tabacum]
Length = 831
Score = 96.3 bits (238), Expect(2) = 4e-20
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKWRC+P+ ETYNALIS HGR+GQWRWA NIMEDMLRAA
Sbjct: 173 QARGLFFEMQKWRCQPNVETYNALISAHGRAGQWRWAKNIMEDMLRAA 220
Score = 31.6 bits (70), Expect(2) = 4e-20
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
+EI QMGSIEHSIQVF
Sbjct: 127 KEISQMGSIEHSIQVF 142
>XP_009617024.2 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
[Nicotiana tomentosiformis]
Length = 830
Score = 96.3 bits (238), Expect(2) = 4e-20
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKWRC+P+ ETYNALIS HGR+GQWRWA NIMEDMLRAA
Sbjct: 172 QARGLFFEMQKWRCQPNVETYNALISAHGRAGQWRWAKNIMEDMLRAA 219
Score = 31.6 bits (70), Expect(2) = 4e-20
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
+EI QMGSIEHSIQVF
Sbjct: 126 KEITQMGSIEHSIQVF 141
>XP_016479023.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
isoform X1 [Nicotiana tabacum]
Length = 830
Score = 96.3 bits (238), Expect(2) = 4e-20
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKWRC+P+ ETYNALIS HGR+GQWRWA NIMEDMLRAA
Sbjct: 172 QARGLFFEMQKWRCQPNVETYNALISAHGRAGQWRWAKNIMEDMLRAA 219
Score = 31.6 bits (70), Expect(2) = 4e-20
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
+EI QMGSIEHSIQVF
Sbjct: 126 KEITQMGSIEHSIQVF 141
>XP_019232036.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
isoform X2 [Nicotiana attenuata]
Length = 752
Score = 96.3 bits (238), Expect(2) = 4e-20
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKWRC+P+ ETYNALIS HGR+GQWRWA NIMEDMLRAA
Sbjct: 173 QARGLFFEMQKWRCQPNVETYNALISAHGRAGQWRWAKNIMEDMLRAA 220
Score = 31.6 bits (70), Expect(2) = 4e-20
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
+EI QMGSIEHSIQVF
Sbjct: 127 KEITQMGSIEHSIQVF 142
>XP_016479024.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
isoform X2 [Nicotiana tabacum]
Length = 709
Score = 96.3 bits (238), Expect(2) = 4e-20
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKWRC+P+ ETYNALIS HGR+GQWRWA NIMEDMLRAA
Sbjct: 51 QARGLFFEMQKWRCQPNVETYNALISAHGRAGQWRWAKNIMEDMLRAA 98
Score = 31.6 bits (70), Expect(2) = 4e-20
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
+EI QMGSIEHSIQVF
Sbjct: 5 KEITQMGSIEHSIQVF 20
>XP_010672859.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
isoform X1 [Beta vulgaris subsp. vulgaris]
Length = 864
Score = 100 bits (250), Expect(2) = 5e-20
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKW+CKPDAETYNALI+THGR+GQWRWAM IMEDMLRAA
Sbjct: 185 QARGLFFEMQKWKCKPDAETYNALINTHGRAGQWRWAMTIMEDMLRAA 232
Score = 26.6 bits (57), Expect(2) = 5e-20
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
+E+ Q+GSIEH+I VF
Sbjct: 139 KELTQLGSIEHAIHVF 154
>XP_010672860.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
isoform X2 [Beta vulgaris subsp. vulgaris] KMT15037.1
hypothetical protein BVRB_3g061610 isoform A [Beta
vulgaris subsp. vulgaris]
Length = 863
Score = 100 bits (250), Expect(2) = 5e-20
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKW+CKPDAETYNALI+THGR+GQWRWAM IMEDMLRAA
Sbjct: 185 QARGLFFEMQKWKCKPDAETYNALINTHGRAGQWRWAMTIMEDMLRAA 232
Score = 26.6 bits (57), Expect(2) = 5e-20
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
+E+ Q+GSIEH+I VF
Sbjct: 139 KELTQLGSIEHAIHVF 154
>XP_010247509.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
isoform X1 [Nelumbo nucifera]
Length = 857
Score = 99.8 bits (247), Expect(2) = 5e-20
Identities = 43/48 (89%), Positives = 47/48 (97%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQ+WRCKPDAETYNALI+ HGR+GQWRWAMNIM+DMLRAA
Sbjct: 189 QARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 236
Score = 27.7 bits (60), Expect(2) = 5e-20
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
RE+ ++GS+EHS+QVF
Sbjct: 143 REMTKLGSLEHSVQVF 158
>XP_010247510.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
isoform X2 [Nelumbo nucifera]
Length = 822
Score = 99.8 bits (247), Expect(2) = 5e-20
Identities = 43/48 (89%), Positives = 47/48 (97%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQ+WRCKPDAETYNALI+ HGR+GQWRWAMNIM+DMLRAA
Sbjct: 189 QARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 236
Score = 27.7 bits (60), Expect(2) = 5e-20
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
RE+ ++GS+EHS+QVF
Sbjct: 143 REMTKLGSLEHSVQVF 158
>XP_019104222.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
isoform X3 [Beta vulgaris subsp. vulgaris]
Length = 800
Score = 100 bits (250), Expect(2) = 5e-20
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKW+CKPDAETYNALI+THGR+GQWRWAM IMEDMLRAA
Sbjct: 185 QARGLFFEMQKWKCKPDAETYNALINTHGRAGQWRWAMTIMEDMLRAA 232
Score = 26.6 bits (57), Expect(2) = 5e-20
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
+E+ Q+GSIEH+I VF
Sbjct: 139 KELTQLGSIEHAIHVF 154
>KVH94780.1 Pentatricopeptide repeat-containing protein [Cynara cardunculus var.
scolymus]
Length = 773
Score = 102 bits (254), Expect(2) = 5e-20
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKWRCKPDAETYNALIS HGRSGQWRWA NIMEDMLRAA
Sbjct: 178 QARGLFFEMQKWRCKPDAETYNALISAHGRSGQWRWATNIMEDMLRAA 225
Score = 25.0 bits (53), Expect(2) = 5e-20
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
+EI + GSIEHS QVF
Sbjct: 132 KEISRTGSIEHSNQVF 147
>XP_010247511.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
isoform X3 [Nelumbo nucifera]
Length = 770
Score = 99.8 bits (247), Expect(2) = 5e-20
Identities = 43/48 (89%), Positives = 47/48 (97%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQ+WRCKPDAETYNALI+ HGR+GQWRWAMNIM+DMLRAA
Sbjct: 189 QARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 236
Score = 27.7 bits (60), Expect(2) = 5e-20
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
RE+ ++GS+EHS+QVF
Sbjct: 143 REMTKLGSLEHSVQVF 158
>XP_019104223.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
isoform X5 [Beta vulgaris subsp. vulgaris]
Length = 717
Score = 100 bits (250), Expect(2) = 5e-20
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKW+CKPDAETYNALI+THGR+GQWRWAM IMEDMLRAA
Sbjct: 185 QARGLFFEMQKWKCKPDAETYNALINTHGRAGQWRWAMTIMEDMLRAA 232
Score = 26.6 bits (57), Expect(2) = 5e-20
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
+E+ Q+GSIEH+I VF
Sbjct: 139 KELTQLGSIEHAIHVF 154
>XP_019104224.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
isoform X6 [Beta vulgaris subsp. vulgaris]
Length = 715
Score = 100 bits (250), Expect(2) = 5e-20
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKW+CKPDAETYNALI+THGR+GQWRWAM IMEDMLRAA
Sbjct: 185 QARGLFFEMQKWKCKPDAETYNALINTHGRAGQWRWAMTIMEDMLRAA 232
Score = 26.6 bits (57), Expect(2) = 5e-20
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
+E+ Q+GSIEH+I VF
Sbjct: 139 KELTQLGSIEHAIHVF 154
>XP_019166094.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
isoform X1 [Ipomoea nil]
Length = 848
Score = 98.6 bits (244), Expect(2) = 9e-20
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKWRC+PDAETYNALI+ HGR+GQWRWA NIMEDMLRAA
Sbjct: 178 QARGLFFEMQKWRCQPDAETYNALINAHGRAGQWRWAKNIMEDMLRAA 225
Score = 28.1 bits (61), Expect(2) = 9e-20
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 1087 REIMQMGSIEHSIQVF 1134
+EI Q+GSIEHS+ VF
Sbjct: 132 KEITQLGSIEHSVHVF 147
>XP_010672862.1 PREDICTED: pentatricopeptide repeat-containing protein At2g41720
isoform X4 [Beta vulgaris subsp. vulgaris]
Length = 728
Score = 100 bits (250), Expect(2) = 9e-20
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKW+CKPDAETYNALI+THGR+GQWRWAM IMEDMLRAA
Sbjct: 49 QARGLFFEMQKWKCKPDAETYNALINTHGRAGQWRWAMTIMEDMLRAA 96
Score = 25.8 bits (55), Expect(2) = 9e-20
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 1090 EIMQMGSIEHSIQVF 1134
E+ Q+GSIEH+I VF
Sbjct: 4 ELTQLGSIEHAIHVF 18
>KMT15038.1 hypothetical protein BVRB_3g061610 isoform B [Beta vulgaris subsp.
vulgaris]
Length = 727
Score = 100 bits (250), Expect(2) = 9e-20
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +3
Query: 1185 QARGLFFEMQKWRCKPDAETYNALISTHGRSGQWRWAMNIMEDMLRAA 1328
QARGLFFEMQKW+CKPDAETYNALI+THGR+GQWRWAM IMEDMLRAA
Sbjct: 49 QARGLFFEMQKWKCKPDAETYNALINTHGRAGQWRWAMTIMEDMLRAA 96
Score = 25.8 bits (55), Expect(2) = 9e-20
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 1090 EIMQMGSIEHSIQVF 1134
E+ Q+GSIEH+I VF
Sbjct: 4 ELTQLGSIEHAIHVF 18