BLASTX nr result

ID: Panax25_contig00011221 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00011221
         (351 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KVI08400.1 Cleavage/polyadenylation specificity factor, A subuni...   116   6e-28
KZM93802.1 hypothetical protein DCAR_017047 [Daucus carota subsp...   111   3e-26
XP_017252237.1 PREDICTED: pre-mRNA-splicing factor RSE1 isoform ...   111   3e-26
XP_017252235.1 PREDICTED: pre-mRNA-splicing factor RSE1 isoform ...   111   3e-26
XP_012090856.1 PREDICTED: pre-mRNA-splicing factor RSE1 [Jatroph...   111   4e-26
GAU17586.1 hypothetical protein TSUD_341310 [Trifolium subterran...   110   1e-25
XP_014629422.1 PREDICTED: uncharacterized protein LOC100806799 i...   108   3e-25
XP_006577114.1 PREDICTED: splicing factor 3B subunit 3-like isof...   108   3e-25
XP_014629421.1 PREDICTED: splicing factor 3B subunit 3-like isof...   108   3e-25
XP_014629420.1 PREDICTED: splicing factor 3B subunit 3-like isof...   108   3e-25
XP_014629419.1 PREDICTED: splicing factor 3B subunit 3-like isof...   108   3e-25
XP_006577113.1 PREDICTED: splicing factor 3B subunit 3-like isof...   108   3e-25
XP_006577112.1 PREDICTED: splicing factor 3B subunit 3-like isof...   108   3e-25
KHN22567.1 Splicing factor 3B subunit 3 [Glycine soja]                108   3e-25
XP_010036534.1 PREDICTED: uncharacterized protein LOC104425527 i...   108   5e-25
KCW48150.1 hypothetical protein EUGRSUZ_K01882 [Eucalyptus grandis]   108   5e-25
KCW48149.1 hypothetical protein EUGRSUZ_K01882 [Eucalyptus grandis]   108   5e-25
XP_010036533.1 PREDICTED: uncharacterized protein LOC104425527 i...   108   5e-25
GAV86134.1 CPSF_A domain-containing protein/MMS1_N domain-contai...   108   5e-25
XP_019232759.1 PREDICTED: uncharacterized protein LOC109213418 i...   107   7e-25

>KVI08400.1 Cleavage/polyadenylation specificity factor, A subunit, C-terminal
           [Cynara cardunculus var. scolymus]
          Length = 1383

 Score =  116 bits (291), Expect = 6e-28
 Identities = 56/73 (76%), Positives = 64/73 (87%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLAILLNR+ S LNELLLLEWNT+E+  HV+SQY+E GPLAH+IVEVP+SYGFAF
Sbjct: 225 KEHNPVLAILLNRKGSLLNELLLLEWNTRENFVHVLSQYAELGPLAHDIVEVPNSYGFAF 284

Query: 48  LFRVGDVLLT*LK 10
           LFRV D LL  L+
Sbjct: 285 LFRVSDALLMDLR 297


>KZM93802.1 hypothetical protein DCAR_017047 [Daucus carota subsp. sativus]
          Length = 1348

 Score =  111 bits (278), Expect = 3e-26
 Identities = 54/73 (73%), Positives = 63/73 (86%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLAILL+RRDS + ELLLLEW+ +E +AHV+SQYS+AG LAHNI EVP  YGFAF
Sbjct: 191 KEHNPVLAILLSRRDSVVTELLLLEWDIEEDNAHVLSQYSDAGSLAHNITEVPGLYGFAF 250

Query: 48  LFRVGDVLLT*LK 10
           LFRVGD+LL  L+
Sbjct: 251 LFRVGDILLMDLR 263


>XP_017252237.1 PREDICTED: pre-mRNA-splicing factor RSE1 isoform X3 [Daucus carota
           subsp. sativus]
          Length = 1382

 Score =  111 bits (278), Expect = 3e-26
 Identities = 54/73 (73%), Positives = 63/73 (86%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLAILL+RRDS + ELLLLEW+ +E +AHV+SQYS+AG LAHNI EVP  YGFAF
Sbjct: 226 KEHNPVLAILLSRRDSVVTELLLLEWDIEEDNAHVLSQYSDAGSLAHNITEVPGLYGFAF 285

Query: 48  LFRVGDVLLT*LK 10
           LFRVGD+LL  L+
Sbjct: 286 LFRVGDILLMDLR 298


>XP_017252235.1 PREDICTED: pre-mRNA-splicing factor RSE1 isoform X1 [Daucus carota
           subsp. sativus] XP_017252236.1 PREDICTED:
           pre-mRNA-splicing factor RSE1 isoform X2 [Daucus carota
           subsp. sativus]
          Length = 1383

 Score =  111 bits (278), Expect = 3e-26
 Identities = 54/73 (73%), Positives = 63/73 (86%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLAILL+RRDS + ELLLLEW+ +E +AHV+SQYS+AG LAHNI EVP  YGFAF
Sbjct: 226 KEHNPVLAILLSRRDSVVTELLLLEWDIEEDNAHVLSQYSDAGSLAHNITEVPGLYGFAF 285

Query: 48  LFRVGDVLLT*LK 10
           LFRVGD+LL  L+
Sbjct: 286 LFRVGDILLMDLR 298


>XP_012090856.1 PREDICTED: pre-mRNA-splicing factor RSE1 [Jatropha curcas]
          Length = 1386

 Score =  111 bits (277), Expect = 4e-26
 Identities = 54/73 (73%), Positives = 61/73 (83%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLAI+LNRR + LNELLLLEWN  EH  +VIS Y EAGP+AH+I+EVPHS GFAF
Sbjct: 227 KEHNPVLAIILNRRGALLNELLLLEWNIGEHAINVISLYVEAGPIAHDIIEVPHSNGFAF 286

Query: 48  LFRVGDVLLT*LK 10
           LFRVGD LL  L+
Sbjct: 287 LFRVGDALLMDLR 299


>GAU17586.1 hypothetical protein TSUD_341310 [Trifolium subterraneum]
          Length = 1291

 Score =  110 bits (274), Expect = 1e-25
 Identities = 53/69 (76%), Positives = 58/69 (84%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLAI+LN+R + LNELLLLEWN K H   VISQY EAGPLAHN+VEVP+S G AF
Sbjct: 229 KEHNPVLAIILNKRGALLNELLLLEWNVKAHTISVISQYVEAGPLAHNVVEVPNSPGLAF 288

Query: 48  LFRVGDVLL 22
           LFR GDVLL
Sbjct: 289 LFRAGDVLL 297


>XP_014629422.1 PREDICTED: uncharacterized protein LOC100806799 isoform X7 [Glycine
           max] XP_014629423.1 PREDICTED: uncharacterized protein
           LOC100806799 isoform X7 [Glycine max] XP_014629424.1
           PREDICTED: uncharacterized protein LOC100806799 isoform
           X7 [Glycine max] XP_014629425.1 PREDICTED:
           uncharacterized protein LOC100806799 isoform X7 [Glycine
           max]
          Length = 1183

 Score =  108 bits (271), Expect = 3e-25
 Identities = 53/73 (72%), Positives = 60/73 (82%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLA+++NRR + LNELLLLEWN K H   VISQY EAGPLAH+IVEVP+S G AF
Sbjct: 231 KEHNPVLAVIINRRGALLNELLLLEWNVKAHKIFVISQYVEAGPLAHDIVEVPNSGGLAF 290

Query: 48  LFRVGDVLLT*LK 10
           LFR GDVLL  L+
Sbjct: 291 LFRAGDVLLMDLR 303


>XP_006577114.1 PREDICTED: splicing factor 3B subunit 3-like isoform X6 [Glycine
           max]
          Length = 1226

 Score =  108 bits (271), Expect = 3e-25
 Identities = 53/73 (72%), Positives = 60/73 (82%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLA+++NRR + LNELLLLEWN K H   VISQY EAGPLAH+IVEVP+S G AF
Sbjct: 231 KEHNPVLAVIINRRGALLNELLLLEWNVKAHKIFVISQYVEAGPLAHDIVEVPNSGGLAF 290

Query: 48  LFRVGDVLLT*LK 10
           LFR GDVLL  L+
Sbjct: 291 LFRAGDVLLMDLR 303


>XP_014629421.1 PREDICTED: splicing factor 3B subunit 3-like isoform X5 [Glycine
           max]
          Length = 1229

 Score =  108 bits (271), Expect = 3e-25
 Identities = 53/73 (72%), Positives = 60/73 (82%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLA+++NRR + LNELLLLEWN K H   VISQY EAGPLAH+IVEVP+S G AF
Sbjct: 231 KEHNPVLAVIINRRGALLNELLLLEWNVKAHKIFVISQYVEAGPLAHDIVEVPNSGGLAF 290

Query: 48  LFRVGDVLLT*LK 10
           LFR GDVLL  L+
Sbjct: 291 LFRAGDVLLMDLR 303


>XP_014629420.1 PREDICTED: splicing factor 3B subunit 3-like isoform X4 [Glycine
           max]
          Length = 1232

 Score =  108 bits (271), Expect = 3e-25
 Identities = 53/73 (72%), Positives = 60/73 (82%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLA+++NRR + LNELLLLEWN K H   VISQY EAGPLAH+IVEVP+S G AF
Sbjct: 231 KEHNPVLAVIINRRGALLNELLLLEWNVKAHKIFVISQYVEAGPLAHDIVEVPNSGGLAF 290

Query: 48  LFRVGDVLLT*LK 10
           LFR GDVLL  L+
Sbjct: 291 LFRAGDVLLMDLR 303


>XP_014629419.1 PREDICTED: splicing factor 3B subunit 3-like isoform X3 [Glycine
           max]
          Length = 1300

 Score =  108 bits (271), Expect = 3e-25
 Identities = 53/73 (72%), Positives = 60/73 (82%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLA+++NRR + LNELLLLEWN K H   VISQY EAGPLAH+IVEVP+S G AF
Sbjct: 231 KEHNPVLAVIINRRGALLNELLLLEWNVKAHKIFVISQYVEAGPLAHDIVEVPNSGGLAF 290

Query: 48  LFRVGDVLLT*LK 10
           LFR GDVLL  L+
Sbjct: 291 LFRAGDVLLMDLR 303


>XP_006577113.1 PREDICTED: splicing factor 3B subunit 3-like isoform X2 [Glycine
           max]
          Length = 1373

 Score =  108 bits (271), Expect = 3e-25
 Identities = 53/73 (72%), Positives = 60/73 (82%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLA+++NRR + LNELLLLEWN K H   VISQY EAGPLAH+IVEVP+S G AF
Sbjct: 231 KEHNPVLAVIINRRGALLNELLLLEWNVKAHKIFVISQYVEAGPLAHDIVEVPNSGGLAF 290

Query: 48  LFRVGDVLLT*LK 10
           LFR GDVLL  L+
Sbjct: 291 LFRAGDVLLMDLR 303


>XP_006577112.1 PREDICTED: splicing factor 3B subunit 3-like isoform X1 [Glycine
           max] KRH68075.1 hypothetical protein GLYMA_03G206600
           [Glycine max]
          Length = 1387

 Score =  108 bits (271), Expect = 3e-25
 Identities = 53/73 (72%), Positives = 60/73 (82%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLA+++NRR + LNELLLLEWN K H   VISQY EAGPLAH+IVEVP+S G AF
Sbjct: 231 KEHNPVLAVIINRRGALLNELLLLEWNVKAHKIFVISQYVEAGPLAHDIVEVPNSGGLAF 290

Query: 48  LFRVGDVLLT*LK 10
           LFR GDVLL  L+
Sbjct: 291 LFRAGDVLLMDLR 303


>KHN22567.1 Splicing factor 3B subunit 3 [Glycine soja]
          Length = 1429

 Score =  108 bits (271), Expect = 3e-25
 Identities = 53/73 (72%), Positives = 60/73 (82%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLA+++NRR + LNELLLLEWN K H   VISQY EAGPLAH+IVEVP+S G AF
Sbjct: 231 KEHNPVLAVIINRRGALLNELLLLEWNVKAHKIFVISQYVEAGPLAHDIVEVPNSGGLAF 290

Query: 48  LFRVGDVLLT*LK 10
           LFR GDVLL  L+
Sbjct: 291 LFRAGDVLLMDLR 303


>XP_010036534.1 PREDICTED: uncharacterized protein LOC104425527 isoform X2
           [Eucalyptus grandis]
          Length = 1165

 Score =  108 bits (269), Expect = 5e-25
 Identities = 50/73 (68%), Positives = 60/73 (82%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEH+ VLAILLNR+ + LNELLL  WN +EHD H ISQY EAGPLAHN++EVPH +GFAF
Sbjct: 223 KEHDAVLAILLNRKGASLNELLLFGWNVREHDLHFISQYVEAGPLAHNLIEVPHLHGFAF 282

Query: 48  LFRVGDVLLT*LK 10
           L R+GD+LL  L+
Sbjct: 283 LMRLGDILLMDLR 295


>KCW48150.1 hypothetical protein EUGRSUZ_K01882 [Eucalyptus grandis]
          Length = 1232

 Score =  108 bits (269), Expect = 5e-25
 Identities = 50/73 (68%), Positives = 60/73 (82%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEH+ VLAILLNR+ + LNELLL  WN +EHD H ISQY EAGPLAHN++EVPH +GFAF
Sbjct: 122 KEHDAVLAILLNRKGASLNELLLFGWNVREHDLHFISQYVEAGPLAHNLIEVPHLHGFAF 181

Query: 48  LFRVGDVLLT*LK 10
           L R+GD+LL  L+
Sbjct: 182 LMRLGDILLMDLR 194


>KCW48149.1 hypothetical protein EUGRSUZ_K01882 [Eucalyptus grandis]
          Length = 1283

 Score =  108 bits (269), Expect = 5e-25
 Identities = 50/73 (68%), Positives = 60/73 (82%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEH+ VLAILLNR+ + LNELLL  WN +EHD H ISQY EAGPLAHN++EVPH +GFAF
Sbjct: 122 KEHDAVLAILLNRKGASLNELLLFGWNVREHDLHFISQYVEAGPLAHNLIEVPHLHGFAF 181

Query: 48  LFRVGDVLLT*LK 10
           L R+GD+LL  L+
Sbjct: 182 LMRLGDILLMDLR 194


>XP_010036533.1 PREDICTED: uncharacterized protein LOC104425527 isoform X1
           [Eucalyptus grandis]
          Length = 1384

 Score =  108 bits (269), Expect = 5e-25
 Identities = 50/73 (68%), Positives = 60/73 (82%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEH+ VLAILLNR+ + LNELLL  WN +EHD H ISQY EAGPLAHN++EVPH +GFAF
Sbjct: 223 KEHDAVLAILLNRKGASLNELLLFGWNVREHDLHFISQYVEAGPLAHNLIEVPHLHGFAF 282

Query: 48  LFRVGDVLLT*LK 10
           L R+GD+LL  L+
Sbjct: 283 LMRLGDILLMDLR 295


>GAV86134.1 CPSF_A domain-containing protein/MMS1_N domain-containing protein,
           partial [Cephalotus follicularis]
          Length = 1391

 Score =  108 bits (269), Expect = 5e-25
 Identities = 55/73 (75%), Positives = 60/73 (82%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KE NPVLA+LLNR  + LNELLLL WN KE+  HVIS Y EAGPLAH+IVEVPHS GFAF
Sbjct: 252 KEDNPVLAMLLNRSGAHLNELLLLGWNIKENALHVISHYVEAGPLAHSIVEVPHSSGFAF 311

Query: 48  LFRVGDVLLT*LK 10
           LFRVGDVLL  L+
Sbjct: 312 LFRVGDVLLMDLR 324


>XP_019232759.1 PREDICTED: uncharacterized protein LOC109213418 isoform X3
           [Nicotiana attenuata]
          Length = 1319

 Score =  107 bits (268), Expect = 7e-25
 Identities = 49/69 (71%), Positives = 56/69 (81%)
 Frame = -1

Query: 228 KEHNPVLAILLNRRDSFLNELLLLEWNTKEHDAHVISQYSEAGPLAHNIVEVPHSYGFAF 49
           KEHNPVLAILLNRR S+  EL+L+EWN KEH  HVI QYSE GPLAH+IVEVPHSYG   
Sbjct: 230 KEHNPVLAILLNRRRSYRTELMLIEWNMKEHSLHVIYQYSEPGPLAHHIVEVPHSYGILL 289

Query: 48  LFRVGDVLL 22
           +FR GD ++
Sbjct: 290 VFRAGDAIV 298


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