BLASTX nr result

ID: Panax25_contig00010218 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00010218
         (647 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_013469976.1 transmembrane protein, putative, partial [Medicag...    63   1e-09
ACU16136.1 unknown, partial [Glycine max]                              55   3e-06

>XP_013469976.1 transmembrane protein, putative, partial [Medicago truncatula]
           KEH44014.1 transmembrane protein, putative, partial
           [Medicago truncatula]
          Length = 97

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = +2

Query: 191 RITQRTHTRHRDTLHKDT-HNQGTRNRGTLLRAAIRPNTLLSTHPSTLRRRLLNKAKAV- 364
           R+ ++  T HRD LHK T HN+    +  L       N LLST    L   L++K +AV 
Sbjct: 6   RLMEKMLTLHRDILHKVTLHNRAIHLKAILHNRVTHRNMLLST----LSHHLVSKVQAVL 61

Query: 365 VSWKAVWLLSAVAVYWMRAFDE 430
           V+WKA WLLSAVAV WM AF++
Sbjct: 62  VAWKAAWLLSAVAVSWMHAFEK 83


>ACU16136.1 unknown, partial [Glycine max]
          Length = 161

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 42/106 (39%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
 Frame = -2

Query: 433 SFIKSTHPIDSNSREQPNSLPRDH-CFCFVEEAAAERTGVRTEERIGADSRPEEGTPVAG 257
           S ++STHP DS+SR QPNSLP +     FV+ A AER   R  E   A  R  E + VA 
Sbjct: 40  SHLRSTHPKDSSSRGQPNSLPNNQGRLNFVDGAEAERIEERRAEDTPAPGRAAEDSLVAA 99

Query: 256 TL-VVSILVEGIPVAGMRPLGNPEEDNLEEEDYQRAA--DSGCNDS 128
            +  V I   GI      P   P   NL   + + AA   +GCN+S
Sbjct: 100 DIPAVGIPAAGILAVDSLPFRTPPAYNLAAVELRLAAVVAAGCNNS 145


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