BLASTX nr result

ID: Panax25_contig00009776 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00009776
         (407 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABF48478.1 dehydrin 5 [Panax ginseng]                                 115   7e-30
ABF48474.1 dehydrin 1 [Panax ginseng]                                 100   6e-24
ABF48480.1 dehydrin 7 [Panax ginseng]                                  97   1e-22
ABF48479.1 dehydrin 6, partial [Panax ginseng]                         92   6e-21

>ABF48478.1 dehydrin 5 [Panax ginseng]
          Length = 174

 Score =  115 bits (287), Expect = 7e-30
 Identities = 69/137 (50%), Positives = 73/137 (53%), Gaps = 2/137 (1%)
 Frame = -3

Query: 405 NPVRQTDDYGNPVHHTTTGAATMGDYSXXXXXXXXXXXXXXXXXXAPNVTGTGTHEQFHL 226
           NPVRQTDDYGNPVHHTTTGAATMGDYS                  APNVTGTGTHEQFHL
Sbjct: 34  NPVRQTDDYGNPVHHTTTGAATMGDYSTAGTVGAYGTGTPTGGFGAPNVTGTGTHEQFHL 93

Query: 225 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLPGVGGHKKEGEQAIYSPVGGGY--AAG 52
                                          KLPG  GHK   + +  +P G GY  AAG
Sbjct: 94  RRSGSSSSSSSEDDGMGRRRKKKGIKEKIKEKLPGGTGHK---DTSTTTPGGYGYGSAAG 150

Query: 51  EEQHHGHEKKGMMEKIK 1
             + HGHEKKGMMEKIK
Sbjct: 151 GGEAHGHEKKGMMEKIK 167


>ABF48474.1 dehydrin 1 [Panax ginseng]
          Length = 197

 Score =  100 bits (249), Expect = 6e-24
 Identities = 61/135 (45%), Positives = 66/135 (48%)
 Frame = -3

Query: 405 NPVRQTDDYGNPVHHTTTGAATMGDYSXXXXXXXXXXXXXXXXXXAPNVTGTGTHEQFHL 226
           NPV QT+ +GN +H T  G  TM                         + GTG H+Q  L
Sbjct: 26  NPVGQTEQFGNIIHQT--GGGTMDGCGTGGAAGTEAYGSAGT-----GMHGTGAHDQSQL 78

Query: 225 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLPGVGGHKKEGEQAIYSPVGGGYAAGEE 46
                                           LPGVGGHKKEGEQAIYSPVGGGYAAGEE
Sbjct: 79  RRSGNSSSSEDDGMGGRKKKGIKGKIKEK---LPGVGGHKKEGEQAIYSPVGGGYAAGEE 135

Query: 45  QHHGHEKKGMMEKIK 1
           QHHGHEKKGMMEKIK
Sbjct: 136 QHHGHEKKGMMEKIK 150


>ABF48480.1 dehydrin 7 [Panax ginseng]
          Length = 196

 Score = 97.1 bits (240), Expect = 1e-22
 Identities = 63/144 (43%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
 Frame = -3

Query: 405 NPVRQTDDYGNPVHHT---------TTGAATMGDYSXXXXXXXXXXXXXXXXXXAPNVTG 253
           NPV QT+ +GNP+H T         T GAA    Y                      + G
Sbjct: 26  NPVGQTEQFGNPIHQTGGGTLDGCGTGGAAGTEAYGSAGT----------------GMHG 69

Query: 252 TGTHEQFHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLPGVGGHKKEGEQAIYSPV 73
           TG H+Q  L                                LPGVGGHK EGEQAIYSPV
Sbjct: 70  TGAHDQSQLRRSGSSSSSEDDGMGGRKKKGIKEKIKEK---LPGVGGHK-EGEQAIYSPV 125

Query: 72  GGGYAAGEEQHHGHEKKGMMEKIK 1
           GGGYAAGEEQHHGHEKKGMMEKIK
Sbjct: 126 GGGYAAGEEQHHGHEKKGMMEKIK 149


>ABF48479.1 dehydrin 6, partial [Panax ginseng]
          Length = 168

 Score = 92.0 bits (227), Expect = 6e-21
 Identities = 41/43 (95%), Positives = 42/43 (97%)
 Frame = -3

Query: 129 LPGVGGHKKEGEQAIYSPVGGGYAAGEEQHHGHEKKGMMEKIK 1
           LPGVGGHK+EGEQA YSPVGGGYAAGEEQHHGHEKKGMMEKIK
Sbjct: 75  LPGVGGHKQEGEQATYSPVGGGYAAGEEQHHGHEKKGMMEKIK 117


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