BLASTX nr result

ID: Panax25_contig00008759 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00008759
         (661 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp...   112   8e-29
XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...   112   8e-29
XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...   112   8e-29
XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...   112   8e-29
XP_010649435.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    67   6e-14
XP_010649440.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    67   6e-14
CBI37639.3 unnamed protein product, partial [Vitis vinifera]           67   6e-14
XP_019075106.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    67   6e-14

>KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp. sativus]
          Length = 1344

 Score =  112 bits (279), Expect(2) = 8e-29
 Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
 Frame = +3

Query: 150  FDKDRDLLPDSDNHFQKCGSKHVSFK----CLTPNPFMKTILREAEHFIDEDLLEKKFKI 317
            FD+D DL  D  N FQK G +  S K    C+TP+   +T   EA+H +  D ++ K K+
Sbjct: 750  FDEDTDLSLDLGNQFQKYGPRESSSKFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKM 808

Query: 318  ASYDYSADRKDKDCIFGYGSMQNNFGWGNCSTSSCME-SGLKDYGSSQGDICNFQVDNLD 494
             SY YS D   K CI G+ +M  NFG  NC  SS +E SGL DY SSQ D C+F+VD+++
Sbjct: 809  NSYHYSGD---KGCISGFDNMGYNFGHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVE 865

Query: 495  YDLFPKCLDEYSDEIKWSSLEACGKNRSMTGAEPSHHISSTICVDEDKDRRAQI 656
            YD  P   D +SD++K S  +   +++  + A  S  +      D + D R++I
Sbjct: 866  YDFLPNVFDFHSDKVKGSCSKPVDRDKGRSDAASSSRVFLWNNEDANADGRSEI 919



 Score = 43.1 bits (100), Expect(2) = 8e-29
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +2

Query: 20  DSWKDKRVSIWSSPRLLTQRDMCMGPDITARDSMQLFPIIRECF 151
           +S KD+R S+W SP    +  M MGPD T R  MQLF ++  CF
Sbjct: 708 ESGKDERASVWCSPGFTNKDVMFMGPDTTTRAPMQLFQMV-ACF 750


>XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Daucus carota
            subsp. sativus]
          Length = 1235

 Score =  112 bits (279), Expect(2) = 8e-29
 Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
 Frame = +3

Query: 150  FDKDRDLLPDSDNHFQKCGSKHVSFK----CLTPNPFMKTILREAEHFIDEDLLEKKFKI 317
            FD+D DL  D  N FQK G +  S K    C+TP+   +T   EA+H +  D ++ K K+
Sbjct: 646  FDEDTDLSLDLGNQFQKYGPRESSSKFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKM 704

Query: 318  ASYDYSADRKDKDCIFGYGSMQNNFGWGNCSTSSCME-SGLKDYGSSQGDICNFQVDNLD 494
             SY YS D   K CI G+ +M  NFG  NC  SS +E SGL DY SSQ D C+F+VD+++
Sbjct: 705  NSYHYSGD---KGCISGFDNMGYNFGHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVE 761

Query: 495  YDLFPKCLDEYSDEIKWSSLEACGKNRSMTGAEPSHHISSTICVDEDKDRRAQI 656
            YD  P   D +SD++K S  +   +++  + A  S  +      D + D R++I
Sbjct: 762  YDFLPNVFDFHSDKVKGSCSKPVDRDKGRSDAASSSRVFLWNNEDANADGRSEI 815



 Score = 43.1 bits (100), Expect(2) = 8e-29
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +2

Query: 20  DSWKDKRVSIWSSPRLLTQRDMCMGPDITARDSMQLFPIIRECF 151
           +S KD+R S+W SP    +  M MGPD T R  MQLF ++  CF
Sbjct: 604 ESGKDERASVWCSPGFTNKDVMFMGPDTTTRAPMQLFQMV-ACF 646


>XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Daucus carota
            subsp. sativus]
          Length = 1133

 Score =  112 bits (279), Expect(2) = 8e-29
 Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
 Frame = +3

Query: 150  FDKDRDLLPDSDNHFQKCGSKHVSFK----CLTPNPFMKTILREAEHFIDEDLLEKKFKI 317
            FD+D DL  D  N FQK G +  S K    C+TP+   +T   EA+H +  D ++ K K+
Sbjct: 646  FDEDTDLSLDLGNQFQKYGPRESSSKFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKM 704

Query: 318  ASYDYSADRKDKDCIFGYGSMQNNFGWGNCSTSSCME-SGLKDYGSSQGDICNFQVDNLD 494
             SY YS D   K CI G+ +M  NFG  NC  SS +E SGL DY SSQ D C+F+VD+++
Sbjct: 705  NSYHYSGD---KGCISGFDNMGYNFGHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVE 761

Query: 495  YDLFPKCLDEYSDEIKWSSLEACGKNRSMTGAEPSHHISSTICVDEDKDRRAQI 656
            YD  P   D +SD++K S  +   +++  + A  S  +      D + D R++I
Sbjct: 762  YDFLPNVFDFHSDKVKGSCSKPVDRDKGRSDAASSSRVFLWNNEDANADGRSEI 815



 Score = 43.1 bits (100), Expect(2) = 8e-29
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +2

Query: 20  DSWKDKRVSIWSSPRLLTQRDMCMGPDITARDSMQLFPIIRECF 151
           +S KD+R S+W SP    +  M MGPD T R  MQLF ++  CF
Sbjct: 604 ESGKDERASVWCSPGFTNKDVMFMGPDTTTRAPMQLFQMV-ACF 646


>XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Daucus carota
            subsp. sativus]
          Length = 1045

 Score =  112 bits (279), Expect(2) = 8e-29
 Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
 Frame = +3

Query: 150  FDKDRDLLPDSDNHFQKCGSKHVSFK----CLTPNPFMKTILREAEHFIDEDLLEKKFKI 317
            FD+D DL  D  N FQK G +  S K    C+TP+   +T   EA+H +  D ++ K K+
Sbjct: 646  FDEDTDLSLDLGNQFQKYGPRESSSKFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKM 704

Query: 318  ASYDYSADRKDKDCIFGYGSMQNNFGWGNCSTSSCME-SGLKDYGSSQGDICNFQVDNLD 494
             SY YS D   K CI G+ +M  NFG  NC  SS +E SGL DY SSQ D C+F+VD+++
Sbjct: 705  NSYHYSGD---KGCISGFDNMGYNFGHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVE 761

Query: 495  YDLFPKCLDEYSDEIKWSSLEACGKNRSMTGAEPSHHISSTICVDEDKDRRAQI 656
            YD  P   D +SD++K S  +   +++  + A  S  +      D + D R++I
Sbjct: 762  YDFLPNVFDFHSDKVKGSCSKPVDRDKGRSDAASSSRVFLWNNEDANADGRSEI 815



 Score = 43.1 bits (100), Expect(2) = 8e-29
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +2

Query: 20  DSWKDKRVSIWSSPRLLTQRDMCMGPDITARDSMQLFPIIRECF 151
           +S KD+R S+W SP    +  M MGPD T R  MQLF ++  CF
Sbjct: 604 ESGKDERASVWCSPGFTNKDVMFMGPDTTTRAPMQLFQMV-ACF 646


>XP_010649435.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Vitis
            vinifera] XP_010649438.1 PREDICTED: DNA mismatch repair
            protein MLH3 isoform X1 [Vitis vinifera] XP_010649439.1
            PREDICTED: DNA mismatch repair protein MLH3 isoform X1
            [Vitis vinifera]
          Length = 1249

 Score = 66.6 bits (161), Expect(2) = 6e-14
 Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
 Frame = +3

Query: 150  FDKDRDLLPDSDNHFQKCGSKHVSFKC----LTPNPFMKTILREAEHFIDEDLLEKKF-- 311
            F  + +L PDS     K GS H+S       +      +T   + EHF  E+  +     
Sbjct: 639  FAVENNLPPDSVEQSGKFGSGHLSLNSECCSMVSQSLFQTTPWDVEHFTHENTPQGGLGS 698

Query: 312  -KIASYDYSADRKDKDCIFGYGSMQNNFGWGNCSTSSCMES--GLKDYGSSQGDICN-FQ 479
             +  SY++  D +    IF +  M ++    NCS+SSC+ +  GLKDY     DI    +
Sbjct: 699  DRNVSYEHFIDSESGGWIFSHDIMPSSSSQENCSSSSCINTGLGLKDYTVPSRDIYRLLK 758

Query: 480  VDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRSMTGAEPSHHI--SSTICVDEDKDRR 647
             +NLD    P+  D  S E  W   ++CGK+ +   A PS  I  S+ I  DE+K  R
Sbjct: 759  ENNLDNIFTPRHSDILSIETDWLYSKSCGKDNNNNRAVPSCSIPLSTNIHKDENKKER 816



 Score = 38.5 bits (88), Expect(2) = 6e-14
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +2

Query: 23  SWKDKRVSIWSSPRLLTQRDMCMGPDITARDSMQLFPIIRECF 151
           +W+++  S W S RL T+ +MC G D  +RDS++     RE F
Sbjct: 597 AWQEEASSDWPSSRLKTKPEMCTGLDFMSRDSLKSLSTYRERF 639


>XP_010649440.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Vitis
            vinifera]
          Length = 1245

 Score = 66.6 bits (161), Expect(2) = 6e-14
 Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
 Frame = +3

Query: 150  FDKDRDLLPDSDNHFQKCGSKHVSFKC----LTPNPFMKTILREAEHFIDEDLLEKKF-- 311
            F  + +L PDS     K GS H+S       +      +T   + EHF  E+  +     
Sbjct: 639  FAVENNLPPDSVEQSGKFGSGHLSLNSECCSMVSQSLFQTTPWDVEHFTHENTPQGGLGS 698

Query: 312  -KIASYDYSADRKDKDCIFGYGSMQNNFGWGNCSTSSCMES--GLKDYGSSQGDICN-FQ 479
             +  SY++  D +    IF +  M ++    NCS+SSC+ +  GLKDY     DI    +
Sbjct: 699  DRNVSYEHFIDSESGGWIFSHDIMPSSSSQENCSSSSCINTGLGLKDYTVPSRDIYRLLK 758

Query: 480  VDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRSMTGAEPSHHI--SSTICVDEDKDRR 647
             +NLD    P+  D  S E  W   ++CGK+ +   A PS  I  S+ I  DE+K  R
Sbjct: 759  ENNLDNIFTPRHSDILSIETDWLYSKSCGKDNNNNRAVPSCSIPLSTNIHKDENKKER 816



 Score = 38.5 bits (88), Expect(2) = 6e-14
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +2

Query: 23  SWKDKRVSIWSSPRLLTQRDMCMGPDITARDSMQLFPIIRECF 151
           +W+++  S W S RL T+ +MC G D  +RDS++     RE F
Sbjct: 597 AWQEEASSDWPSSRLKTKPEMCTGLDFMSRDSLKSLSTYRERF 639


>CBI37639.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1230

 Score = 66.6 bits (161), Expect(2) = 6e-14
 Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
 Frame = +3

Query: 150  FDKDRDLLPDSDNHFQKCGSKHVSFKC----LTPNPFMKTILREAEHFIDEDLLEKKF-- 311
            F  + +L PDS     K GS H+S       +      +T   + EHF  E+  +     
Sbjct: 620  FAVENNLPPDSVEQSGKFGSGHLSLNSECCSMVSQSLFQTTPWDVEHFTHENTPQGGLGS 679

Query: 312  -KIASYDYSADRKDKDCIFGYGSMQNNFGWGNCSTSSCMES--GLKDYGSSQGDICN-FQ 479
             +  SY++  D +    IF +  M ++    NCS+SSC+ +  GLKDY     DI    +
Sbjct: 680  DRNVSYEHFIDSESGGWIFSHDIMPSSSSQENCSSSSCINTGLGLKDYTVPSRDIYRLLK 739

Query: 480  VDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRSMTGAEPSHHI--SSTICVDEDKDRR 647
             +NLD    P+  D  S E  W   ++CGK+ +   A PS  I  S+ I  DE+K  R
Sbjct: 740  ENNLDNIFTPRHSDILSIETDWLYSKSCGKDNNNNRAVPSCSIPLSTNIHKDENKKER 797



 Score = 38.5 bits (88), Expect(2) = 6e-14
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +2

Query: 23  SWKDKRVSIWSSPRLLTQRDMCMGPDITARDSMQLFPIIRECF 151
           +W+++  S W S RL T+ +MC G D  +RDS++     RE F
Sbjct: 578 AWQEEASSDWPSSRLKTKPEMCTGLDFMSRDSLKSLSTYRERF 620


>XP_019075106.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Vitis
            vinifera]
          Length = 1164

 Score = 66.6 bits (161), Expect(2) = 6e-14
 Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
 Frame = +3

Query: 150  FDKDRDLLPDSDNHFQKCGSKHVSFKC----LTPNPFMKTILREAEHFIDEDLLEKKF-- 311
            F  + +L PDS     K GS H+S       +      +T   + EHF  E+  +     
Sbjct: 554  FAVENNLPPDSVEQSGKFGSGHLSLNSECCSMVSQSLFQTTPWDVEHFTHENTPQGGLGS 613

Query: 312  -KIASYDYSADRKDKDCIFGYGSMQNNFGWGNCSTSSCMES--GLKDYGSSQGDICN-FQ 479
             +  SY++  D +    IF +  M ++    NCS+SSC+ +  GLKDY     DI    +
Sbjct: 614  DRNVSYEHFIDSESGGWIFSHDIMPSSSSQENCSSSSCINTGLGLKDYTVPSRDIYRLLK 673

Query: 480  VDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRSMTGAEPSHHI--SSTICVDEDKDRR 647
             +NLD    P+  D  S E  W   ++CGK+ +   A PS  I  S+ I  DE+K  R
Sbjct: 674  ENNLDNIFTPRHSDILSIETDWLYSKSCGKDNNNNRAVPSCSIPLSTNIHKDENKKER 731



 Score = 38.5 bits (88), Expect(2) = 6e-14
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +2

Query: 23  SWKDKRVSIWSSPRLLTQRDMCMGPDITARDSMQLFPIIRECF 151
           +W+++  S W S RL T+ +MC G D  +RDS++     RE F
Sbjct: 512 AWQEEASSDWPSSRLKTKPEMCTGLDFMSRDSLKSLSTYRERF 554


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