BLASTX nr result

ID: Panax25_contig00008692 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00008692
         (685 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017253548.1 PREDICTED: polyadenylate-binding protein-interact...    87   8e-17
KZM96395.1 hypothetical protein DCAR_019637 [Daucus carota subsp...    87   1e-16
XP_006349995.1 PREDICTED: polyadenylate-binding protein-interact...    79   1e-13
XP_017248643.1 PREDICTED: polyadenylate-binding protein-interact...    78   2e-13
XP_019239921.1 PREDICTED: polyadenylate-binding protein-interact...    77   4e-13
XP_019239920.1 PREDICTED: polyadenylate-binding protein-interact...    77   4e-13
XP_009615216.1 PREDICTED: polyadenylate-binding protein-interact...    75   2e-12
XP_009615215.1 PREDICTED: polyadenylate-binding protein-interact...    75   2e-12
XP_016506634.1 PREDICTED: polyadenylate-binding protein-interact...    74   5e-12
CDP06101.1 unnamed protein product [Coffea canephora]                  73   1e-11
XP_004251830.1 PREDICTED: polyadenylate-binding protein-interact...    72   2e-11
XP_010313882.1 PREDICTED: polyadenylate-binding protein-interact...    72   2e-11
XP_010313881.1 PREDICTED: polyadenylate-binding protein-interact...    72   2e-11
XP_010313880.1 PREDICTED: polyadenylate-binding protein-interact...    72   2e-11
XP_016442594.1 PREDICTED: polyadenylate-binding protein-interact...    71   8e-11
KVH93188.1 Ataxin-2, C-terminal [Cynara cardunculus var. scolymus]     70   1e-10
XP_009771891.1 PREDICTED: polyadenylate-binding protein-interact...    70   1e-10
XP_009771890.1 PREDICTED: polyadenylate-binding protein-interact...    70   1e-10
XP_019194675.1 PREDICTED: polyadenylate-binding protein-interact...    68   7e-10
XP_019154184.1 PREDICTED: polyadenylate-binding protein-interact...    68   9e-10

>XP_017253548.1 PREDICTED: polyadenylate-binding protein-interacting protein 9
           [Daucus carota subsp. sativus]
          Length = 319

 Score = 87.4 bits (215), Expect = 8e-17
 Identities = 46/73 (63%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
 Frame = -3

Query: 215 ETAKNGIPVSNDAKESDS--KSEFQMQDIVDMLSKLKLNPMAKEFFPSSYSNDLNHDQFA 42
           E   N +PVS+D K+SDS  KSE+ MQD+VDMLSKL  NPMAKEF PS YS D N DQ+ 
Sbjct: 26  ENCVNVVPVSDDGKKSDSNSKSEYGMQDLVDMLSKL--NPMAKEFVPSRYSIDRNRDQYG 83

Query: 41  VSYFVPIDKNLGS 3
           V++FVP  KNLG+
Sbjct: 84  VTFFVPAQKNLGN 96


>KZM96395.1 hypothetical protein DCAR_019637 [Daucus carota subsp. sativus]
          Length = 361

 Score = 87.4 bits (215), Expect = 1e-16
 Identities = 46/73 (63%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
 Frame = -3

Query: 215 ETAKNGIPVSNDAKESDS--KSEFQMQDIVDMLSKLKLNPMAKEFFPSSYSNDLNHDQFA 42
           E   N +PVS+D K+SDS  KSE+ MQD+VDMLSKL  NPMAKEF PS YS D N DQ+ 
Sbjct: 26  ENCVNVVPVSDDGKKSDSNSKSEYGMQDLVDMLSKL--NPMAKEFVPSRYSIDRNRDQYG 83

Query: 41  VSYFVPIDKNLGS 3
           V++FVP  KNLG+
Sbjct: 84  VTFFVPAQKNLGN 96


>XP_006349995.1 PREDICTED: polyadenylate-binding protein-interacting protein 8-like
           [Solanum tuberosum]
          Length = 323

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 43/80 (53%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
 Frame = -3

Query: 230 SSPNTETAKNGIPVSNDAKES-----DSKSEFQMQDIVDMLSKLKLNPMAKEFFPSSYSN 66
           SSPNT+   N    SN  K+S     ++KSEF M DI DML KLKLNP AKEFFPSSY+ 
Sbjct: 24  SSPNTDNTSNNSE-SNGVKDSADSIANAKSEFHMHDIADMLKKLKLNPQAKEFFPSSYNR 82

Query: 65  DLNHDQFAVSYFVPIDKNLG 6
               DQ  +S FVP +K +G
Sbjct: 83  AAGGDQMILSNFVPANKTMG 102


>XP_017248643.1 PREDICTED: polyadenylate-binding protein-interacting protein 9-like
           [Daucus carota subsp. sativus] KZM94322.1 hypothetical
           protein DCAR_017565 [Daucus carota subsp. sativus]
          Length = 322

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 42/80 (52%), Positives = 54/80 (67%), Gaps = 5/80 (6%)
 Frame = -3

Query: 236 HSSSPNTE-----TAKNGIPVSNDAKESDSKSEFQMQDIVDMLSKLKLNPMAKEFFPSSY 72
           H+SSP T      +  N +  ++  K+SDSKS F+MQ IV+MLS LKLNPMAKEF PS  
Sbjct: 20  HTSSPETNDSGIGSGGNAVSETHVVKDSDSKSGFRMQHIVNMLSNLKLNPMAKEFIPSYC 79

Query: 71  SNDLNHDQFAVSYFVPIDKN 12
            N  + DQF+ ++FVP DKN
Sbjct: 80  LNYRSPDQFSGNFFVPADKN 99


>XP_019239921.1 PREDICTED: polyadenylate-binding protein-interacting protein 8-like
           isoform X2 [Nicotiana attenuata] OIT20641.1
           polyadenylate-binding protein-interacting protein 9
           [Nicotiana attenuata]
          Length = 328

 Score = 77.4 bits (189), Expect = 4e-13
 Identities = 49/84 (58%), Positives = 58/84 (69%), Gaps = 11/84 (13%)
 Frame = -3

Query: 233 SSSPNTETAKNGIPVSNDA--KESD----SKSEFQMQDIVDMLSKLKLNPMAKEFFPSSY 72
           S SPNT+   N I  SN+   KESD    +KSE+QMQDIVDML KLKLNPMAKEFFPSSY
Sbjct: 22  SLSPNTDN--NIISESNNGCVKESDPIPNAKSEYQMQDIVDMLKKLKLNPMAKEFFPSSY 79

Query: 71  SNDLNHD-----QFAVSYFVPIDK 15
           SN+ N++        +S FVP +K
Sbjct: 80  SNNNNNNNRGDQMLLMSNFVPANK 103


>XP_019239920.1 PREDICTED: polyadenylate-binding protein-interacting protein 8-like
           isoform X1 [Nicotiana attenuata]
          Length = 329

 Score = 77.4 bits (189), Expect = 4e-13
 Identities = 49/84 (58%), Positives = 58/84 (69%), Gaps = 11/84 (13%)
 Frame = -3

Query: 233 SSSPNTETAKNGIPVSNDA--KESD----SKSEFQMQDIVDMLSKLKLNPMAKEFFPSSY 72
           S SPNT+   N I  SN+   KESD    +KSE+QMQDIVDML KLKLNPMAKEFFPSSY
Sbjct: 22  SLSPNTDN--NIISESNNGCVKESDPIPNAKSEYQMQDIVDMLKKLKLNPMAKEFFPSSY 79

Query: 71  SNDLNHD-----QFAVSYFVPIDK 15
           SN+ N++        +S FVP +K
Sbjct: 80  SNNNNNNNRGDQMLLMSNFVPANK 103


>XP_009615216.1 PREDICTED: polyadenylate-binding protein-interacting protein 8-like
           isoform X2 [Nicotiana tomentosiformis]
          Length = 330

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 48/86 (55%), Positives = 58/86 (67%), Gaps = 13/86 (15%)
 Frame = -3

Query: 233 SSSPNTETAKNGIPVSNDA--KESD----SKSEFQMQDIVDMLSKLKLNPMAKEFFPSSY 72
           S SPNT+   N I  SN+   KESD    +KSE+QMQDIVDML KLKLNPMAKEFFPSSY
Sbjct: 22  SLSPNTDN--NIISESNNGCVKESDPIPNAKSEYQMQDIVDMLKKLKLNPMAKEFFPSSY 79

Query: 71  SNDLNHD-------QFAVSYFVPIDK 15
           +N+ N++          +S FVP +K
Sbjct: 80  NNNNNNNNNNRGDQMLLMSNFVPANK 105


>XP_009615215.1 PREDICTED: polyadenylate-binding protein-interacting protein 8-like
           isoform X1 [Nicotiana tomentosiformis]
          Length = 331

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 48/86 (55%), Positives = 58/86 (67%), Gaps = 13/86 (15%)
 Frame = -3

Query: 233 SSSPNTETAKNGIPVSNDA--KESD----SKSEFQMQDIVDMLSKLKLNPMAKEFFPSSY 72
           S SPNT+   N I  SN+   KESD    +KSE+QMQDIVDML KLKLNPMAKEFFPSSY
Sbjct: 22  SLSPNTDN--NIISESNNGCVKESDPIPNAKSEYQMQDIVDMLKKLKLNPMAKEFFPSSY 79

Query: 71  SNDLNHD-------QFAVSYFVPIDK 15
           +N+ N++          +S FVP +K
Sbjct: 80  NNNNNNNNNNRGDQMLLMSNFVPANK 105


>XP_016506634.1 PREDICTED: polyadenylate-binding protein-interacting protein 8-like
           [Nicotiana tabacum]
          Length = 333

 Score = 74.3 bits (181), Expect = 5e-12
 Identities = 48/89 (53%), Positives = 58/89 (65%), Gaps = 16/89 (17%)
 Frame = -3

Query: 233 SSSPNTETAKNGIPVSNDA--KESD----SKSEFQMQDIVDMLSKLKLNPMAKEFFPSSY 72
           S SPNT+   N I  SN+   KESD    +KSE+QMQDIVDML KLKLNPMAKEFFPSSY
Sbjct: 22  SLSPNTDN--NIISESNNGCVKESDPIPNAKSEYQMQDIVDMLKKLKLNPMAKEFFPSSY 79

Query: 71  SNDLNHD----------QFAVSYFVPIDK 15
           +N+ N++             +S FVP +K
Sbjct: 80  NNNNNNNNNNNNNRGDQMLLMSNFVPANK 108


>CDP06101.1 unnamed protein product [Coffea canephora]
          Length = 292

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 42/73 (57%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
 Frame = -3

Query: 200 GIPVSNDAKESDS-------KSEFQMQDIVDMLSKLKLNPMAKEFFPSSYSNDLNHDQFA 42
           G  VS +  ESDS       KSE QMQDIVDML KLKLNP+AKEFFPSSY      DQ  
Sbjct: 4   GTEVSGETAESDSSSNNSNSKSELQMQDIVDMLKKLKLNPLAKEFFPSSY----YRDQMG 59

Query: 41  VSYFVPIDKNLGS 3
           V+ FVP + N G+
Sbjct: 60  VTNFVPANMNWGN 72


>XP_004251830.1 PREDICTED: polyadenylate-binding protein-interacting protein 8
           isoform X4 [Solanum lycopersicum] XP_015061828.1
           PREDICTED: polyadenylate-binding protein-interacting
           protein 8-like [Solanum pennellii]
          Length = 325

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
 Frame = -3

Query: 230 SSPNTETAKNGIPVSNDAKES-----DSKSEFQMQDIVDMLSKLKLNPMAKEFFPSSYSN 66
           SSPNT+   N    SN  K+S     ++KSEF M DI DML KLKLNP AKEFFPSSY+ 
Sbjct: 24  SSPNTDNTSNNSE-SNGVKDSSDSIANAKSEFHMHDIADMLKKLKLNPQAKEFFPSSYNR 82

Query: 65  DL--NHDQFAVSYFVPIDKNLG 6
                 DQ  +S FVP +K  G
Sbjct: 83  GTVGAGDQMILSNFVPANKTTG 104


>XP_010313882.1 PREDICTED: polyadenylate-binding protein-interacting protein 8
           isoform X3 [Solanum lycopersicum]
          Length = 326

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
 Frame = -3

Query: 230 SSPNTETAKNGIPVSNDAKES-----DSKSEFQMQDIVDMLSKLKLNPMAKEFFPSSYSN 66
           SSPNT+   N    SN  K+S     ++KSEF M DI DML KLKLNP AKEFFPSSY+ 
Sbjct: 24  SSPNTDNTSNNSE-SNGVKDSSDSIANAKSEFHMHDIADMLKKLKLNPQAKEFFPSSYNR 82

Query: 65  DL--NHDQFAVSYFVPIDKNLG 6
                 DQ  +S FVP +K  G
Sbjct: 83  GTVGAGDQMILSNFVPANKTTG 104


>XP_010313881.1 PREDICTED: polyadenylate-binding protein-interacting protein 8
           isoform X2 [Solanum lycopersicum]
          Length = 341

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
 Frame = -3

Query: 230 SSPNTETAKNGIPVSNDAKES-----DSKSEFQMQDIVDMLSKLKLNPMAKEFFPSSYSN 66
           SSPNT+   N    SN  K+S     ++KSEF M DI DML KLKLNP AKEFFPSSY+ 
Sbjct: 24  SSPNTDNTSNNSE-SNGVKDSSDSIANAKSEFHMHDIADMLKKLKLNPQAKEFFPSSYNR 82

Query: 65  DL--NHDQFAVSYFVPIDKNLG 6
                 DQ  +S FVP +K  G
Sbjct: 83  GTVGAGDQMILSNFVPANKTTG 104


>XP_010313880.1 PREDICTED: polyadenylate-binding protein-interacting protein 8
           isoform X1 [Solanum lycopersicum]
          Length = 342

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
 Frame = -3

Query: 230 SSPNTETAKNGIPVSNDAKES-----DSKSEFQMQDIVDMLSKLKLNPMAKEFFPSSYSN 66
           SSPNT+   N    SN  K+S     ++KSEF M DI DML KLKLNP AKEFFPSSY+ 
Sbjct: 24  SSPNTDNTSNNSE-SNGVKDSSDSIANAKSEFHMHDIADMLKKLKLNPQAKEFFPSSYNR 82

Query: 65  DL--NHDQFAVSYFVPIDKNLG 6
                 DQ  +S FVP +K  G
Sbjct: 83  GTVGAGDQMILSNFVPANKTTG 104


>XP_016442594.1 PREDICTED: polyadenylate-binding protein-interacting protein 8-like
           [Nicotiana tabacum]
          Length = 333

 Score = 70.9 bits (172), Expect = 8e-11
 Identities = 46/89 (51%), Positives = 57/89 (64%), Gaps = 16/89 (17%)
 Frame = -3

Query: 233 SSSPNTETAKNGIPVSNDA--KESD----SKSEFQMQDIVDMLSKLKLNPMAKEFFPSSY 72
           S SPN +   N I  SN+   KESD    +KSE+QMQDIV+ML KLKLNPMAKEFFPSSY
Sbjct: 22  SLSPNADN--NIISESNNGCVKESDPIPNAKSEYQMQDIVEMLKKLKLNPMAKEFFPSSY 79

Query: 71  SNDLNHDQ----------FAVSYFVPIDK 15
           +N+ N++             +S FVP +K
Sbjct: 80  NNNNNNNNNNNNNRGDQLLLMSNFVPANK 108


>KVH93188.1 Ataxin-2, C-terminal [Cynara cardunculus var. scolymus]
          Length = 366

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
 Frame = -3

Query: 221 NTETAKNGIPVSNDAKESDSKSEFQMQDIVDMLSKLKLNPMAKEFFPSSYSN-DLNHDQF 45
           N++     +       + D +SE +MQ+ VDMLS LKLNPMAKEFFPSSYS  D N DQF
Sbjct: 75  NSDDDDGSVVTPKKGSDPDPRSEMKMQEFVDMLSNLKLNPMAKEFFPSSYSPVDRNRDQF 134

Query: 44  AVSYFV 27
           A +YF+
Sbjct: 135 AFNYFL 140


>XP_009771891.1 PREDICTED: polyadenylate-binding protein-interacting protein 8-like
           isoform X2 [Nicotiana sylvestris]
          Length = 335

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 46/91 (50%), Positives = 57/91 (62%), Gaps = 18/91 (19%)
 Frame = -3

Query: 233 SSSPNTETAKNGIPVSNDA--KESD----SKSEFQMQDIVDMLSKLKLNPMAKEFFPSSY 72
           S SPN +   N I  SN+   KESD    +KSE+QMQDIV+ML KLKLNPMAKEFFPSSY
Sbjct: 22  SLSPNADN--NIISESNNGCVKESDPIPNAKSEYQMQDIVEMLKKLKLNPMAKEFFPSSY 79

Query: 71  SNDLNHDQ------------FAVSYFVPIDK 15
           +N+ N++               +S FVP +K
Sbjct: 80  NNNNNNNNNNNNNNNRGDQLLLMSNFVPANK 110


>XP_009771890.1 PREDICTED: polyadenylate-binding protein-interacting protein 8-like
           isoform X1 [Nicotiana sylvestris]
          Length = 336

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 46/91 (50%), Positives = 57/91 (62%), Gaps = 18/91 (19%)
 Frame = -3

Query: 233 SSSPNTETAKNGIPVSNDA--KESD----SKSEFQMQDIVDMLSKLKLNPMAKEFFPSSY 72
           S SPN +   N I  SN+   KESD    +KSE+QMQDIV+ML KLKLNPMAKEFFPSSY
Sbjct: 22  SLSPNADN--NIISESNNGCVKESDPIPNAKSEYQMQDIVEMLKKLKLNPMAKEFFPSSY 79

Query: 71  SNDLNHDQ------------FAVSYFVPIDK 15
           +N+ N++               +S FVP +K
Sbjct: 80  NNNNNNNNNNNNNNNRGDQLLLMSNFVPANK 110


>XP_019194675.1 PREDICTED: polyadenylate-binding protein-interacting protein 8-like
           [Ipomoea nil]
          Length = 335

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
 Frame = -3

Query: 233 SSSPNTETAKNGIPVSNDAKES--DSKSEFQMQDIVDMLSKLKLNPMAKEFFPSSYSNDL 60
           S++  +E+  +G   SN    S  +SKSE+QMQD+VDML  LKLNP+AKEFFPSSY    
Sbjct: 43  SANAKSESMLDGDKGSNSDPNSILNSKSEYQMQDLVDMLKTLKLNPLAKEFFPSSY---- 98

Query: 59  NHDQFAVSYFVPIDKNLG 6
           + DQ  V  FV   K LG
Sbjct: 99  HRDQMGVHNFVGAHKGLG 116


>XP_019154184.1 PREDICTED: polyadenylate-binding protein-interacting protein 9-like
           [Ipomoea nil]
          Length = 334

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/77 (48%), Positives = 53/77 (68%)
 Frame = -3

Query: 233 SSSPNTETAKNGIPVSNDAKESDSKSEFQMQDIVDMLSKLKLNPMAKEFFPSSYSNDLNH 54
           S++  +E+  NG    +D+ +++S S +QMQDIVDML  LKLNP+AKEFFPSSY    N 
Sbjct: 43  STNAKSESVMNGDKEESDS-DTNSNSGYQMQDIVDMLKTLKLNPLAKEFFPSSY----NQ 97

Query: 53  DQFAVSYFVPIDKNLGS 3
           +Q  V+ FV ++K  G+
Sbjct: 98  EQKLVNNFVGVNKRQGA 114


Top